Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08191
Subject:
NR_147851.1
Aligned Length:
3529
Identities:
944
Gaps:
2581

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCGGCCGCAGCGCGCATTTGGGCTCCGAGGAAGTTGACCGAGGCGGCTGCCGCAGGATCCCGGGCCCGGATCGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ACGAAGCCCGCGCGGCCGTCTCCTCCGCGCGCCACCCCTGCGCCTCCCGCGAGCTCCACTTCCCATCTGCTATT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTTTCCGATTGTTTTCCGGTGGCGAGCCCGGCTCCGAAACTTACAAAGTGTTGGATGTCCCCCGTTCGAACTGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGGACTGCAGACCGCCTCTGGGTAGCTGGATGAAGCCCACCCCGTCCCCTTCTGGTACCAAAGTGCTTACTCCT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTCCAAAGTGCCGTGTCTGAACTGCCGCTGGGAAGAAGCGGCTCCTGAGACGCGCCCACACCTTTCACCTGCCG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CGCGCTTCCCCCTCCTCGGCCACCTTCCCGGCGGAAGCAGCGAGGAGGGAGCCCCCTTTGGCCGTCCTCCGTGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AACCGGTTTTCCGAGGCTGGCAAAAGCCGAGGCTGGATTTGGGGGAGGAATATTAGACTCGGAGGAGTCTGCGC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCTTTTCTCCTCCCCGCGCCTCCCGGTCGCCGCGGGTTCACCGCTCAGTCCCCGCGCTCGCTCCGCACCCCACC  592

Query    1  ------------------------------------------------------------------------AT  2
                                                                                    ||
Sbjct  593  CACTTCCTGTGCTCGCCCGGGGGGCGTGTGCCGTGCGGCTGCCGGAGTTCGGGGAAGTTGTGGCTGTCGAGAAT  666

Query    3  GGGGGTCTGTGGGTACCTGTTCCTGCCCTGGAAGTGCCTCGTGGTCGTGTCTCTCAGGCTGCTGTTCCTTGTAC  76
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GGGGGTCTGTGGGTACCTGTTCCTGCCCTGGAAGTGCCTCGTGGTCGTGTCTCTCAGGCTGCTGTTCCTTGTAC  740

Query   77  CCACAGGAGTGCCCGTGCGCAGCGGAGATGCCACCTTCCCCAAAGCTATGGACAACGTGACGGTCCGGCAGGGG  150
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CCACAGGAGTGCCCGTGCGCAGCGGAGATGCCACCTTCCCCAAAGCTATGGACAACGTGACGGTCCGGCAGGGG  814

Query  151  GAGAGCGCCACCCTCAGGTGCACTATTGACAACCGGGTCACCCGGGTGGCCTGGCTAAACCGCAGCACCATCCT  224
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GAGAGCGCCACCCTCAGGTGCACTATTGACAACCGGGTCACCCGGGTGGCCTGGCTAAACCGCAGCACCATCCT  888

Query  225  CTATGCTGGGAATGACAAGTGGTGCCTGGATCCTCGCGTGGTCCTTCTGAGCAACACCCAAACGCAGTACAGCA  298
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CTATGCTGGGAATGACAAGTGGTGCCTGGATCCTCGCGTGGTCCTTCTGAGCAACACCCAAACGCAGTACAGCA  962

Query  299  TCGAGATCCAGAACGTGGATGTGTATGACGAGGGCCCTTACACCTGCTCGGTGCAGACAGACAACCACCCAAAG  372
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TCGAGATCCAGAACGTGGATGTGTATGACGAGGGCCCTTACACCTGCTCGGTGCAGACAGACAACCACCCAAAG  1036

Query  373  ACCTCTAGGGTCCACCTCATTGTGCAAGTATCTCCCAAAATTGTAGAGATTTCTTCAGATATCTCCATTAATGA  446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  ACCTCTAGGGTCCACCTCATTGTGCAAGTATCTCCCAAAATTGTAGAGATTTCTTCAGATATCTCCATTAATGA  1110

Query  447  AGGGAACAATATTAGCCTCACCTGCATAGCAACTGGTAGACCAGAGCCTACGGTTACTTGGAGACACATCTCTC  520
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AGGGAACAATATTAGCCTCACCTGCATAGCAACTGGTAGACCAGAGCCTACGGTTACTTGGAGACACATCTCTC  1184

Query  521  CCAAAGCGGTTGGCTTTGTGAGTGAAGACGAATACTTGGAAATTCAGGGCATCACCCGGGAGCAGTCAGGGGAC  594
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 1185  CCAAAGCGGTTGGCTTTGTGAGTGAAGACGAATACTTGGAAATTCAGGGCATCACCAGGGAGCAGTCAGGGGAC  1258

Query  595  TACGAGTGCAGTGCCTCCAATGACGTGGCCGCGCCCGTGGTACGGAGAGTAAAGGTCACCGTGAACTATCCACC  668
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TACGAGTGCAGTGCCTCCAATGACGTGGCCGCGCCCGTGGTACGGAGAGTAAAGGTCACCGTGAACTATCCACC  1332

Query  669  ATACATTTCAGAAGCCAAGGGTACAGGTGTCCCCGTGGGACAAAAGGGGACACTGCAGTGTGAAGCCTCAGCAG  742
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  ATACATTTCAGAAGCCAAGGGTACAGGTGTCCCCGTGGGACAAAAGGGGACACTGCAGTGTGAAGCCTCAGCAG  1406

Query  743  TCCCCTCAGCAGAATTCCAGTGGTACAAGGATGACAAAA-----------------------------------  781
            |||||||||||||||||||||||||||||||||||||||                                   
Sbjct 1407  TCCCCTCAGCAGAATTCCAGTGGTACAAGGATGACAAAAGAGCTGAAATCTCATTCACAGTTTGGTTATGATGG  1480

Query  782  --------------------------------------------------------------------------  781
                                                                                      
Sbjct 1481  GAAAGCTTCCTCCCCATGGTGGACGAATGGTGTCAAAACGGCCAGTGGGATCAATCAGCCTGACTTGCTCGCAG  1554

Query  782  ---------GACTGATTGAAGGAAAGAAAGGGGTGAAAGTGGAAAACAGACCTTTCCTCTCAAAACTCATCTTC  846
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  AATCCTCCCGACTGATTGAAGGAAAGAAAGGGGTGAAAGTGGAAAACAGACCTTTCCTCTCAAAACTCATCTTC  1628

Query  847  TTCAATGTCTCTGAACATGACTATGGGAACTACACTTGCGTGGCCTCCAACAAGCTGGGCCACACCAATGCCAG  920
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  TTCAATGTCTCTGAACATGACTATGGGAACTACACTTGCGTGGCCTCCAACAAGCTGGGCCACACCAATGCCAG  1702

Query  921  CATCATGCTATTTG------GTGAGACT--GTGCTC--------------------------------------  948
            ||||||||||||||      .||||.||  |.||||                                      
Sbjct 1703  CATCATGCTATTTGAACTAAATGAGCCTACGAGCTCAACTTTGTTGCAAGGTCCAGGCGCCGTCAGCGAGGTGA  1776

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1777  GCAACGGCACGTCGAGGAGGGCAGGCTGCGTCTGGCTGCTGCCTCTTCTGGTCTTGCACCTGCTTCTCAAATTT  1850

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1851  TGATGTGAGTGCCACTTCCCCACCCGGGAAAGGCTGCCGCCACCACCACCACCAACACAACAGCAATGGCAACA  1924

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1925  CCGACAGCAACCAATCAGATATATACAAATGAAATTAGAAGAAACACAGCCTCATGGGACAGAAATTTGAGGGA  1998

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1999  GGGGAACAAAGAATACTTTGGGGGGAAAAAAGTTTTAAAAAAGAAATTGAAAATTGCCTTGCAGATATTTAGGT  2072

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2073  ACAATGGAGTTTTCTTTTCCCAAACGGGAAGAACACAGCACACCCGGCTTGGACCCACTGCAAGCTGCATCGTG  2146

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2147  CAACCTCTTTGGTGCCAGTGTGGGCAAGGGCTCAGCCTCTCTGCCCACAGAGTGCCCCCACGTGGAACATTCTG  2220

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2221  GAGCTGGCCATCCCAAATTCAATCAGTCCATAGAGACGAACAGAATGAGACCTTCCGGCCCAAGCGTGGCGCTG  2294

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2295  CGGGCACTTTGGTAGACTGTGCCACCACGGCGTGTGTTGTGAAACGTGAAATAAAAAGAGCAAGAAAGAAAAAG  2368

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2369  GAAACAAAATAAGACCGTCTGACAGCAACAACGGTCCCACAAACAAGTCACAAAAGATACCGTTAAACTTTTTT  2442

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2443  TTTTTTTTATCATTTTACTACATGAACATCATGGATAACAAGGGATTCTGATTCATTATTAATTTCATTAATTA  2516

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2517  TATTTTCTGATATGAGTCTAGAACTTACTGCAAAAACAAGACAAAACTAAAAAAATACAACTGAGAAGGGTGAA  2590

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2591  GAGAAGTATGTTTGTTAAACAGTAAAAATGAATAGTATACTTCTTAACTAGGTTTACAACTGGTGGACCACACA  2664

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2665  CCAGGCACTAATCACCTGGTGAGGATTTGGCATATCCACCAAAAAATGCATCCGATTTAACCAACATCTCCACC  2738

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2739  AGCGCTACGGACTCCTCCCAATTCTGACATCTCTTGCAGACAATACTATGCTCTCTACACACTGTTTAGAAATG  2812

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2813  GAAAGGTGATCTGCACTGTATCTTGGGTTTGTTGGCTATGCTTCCTTTGATGACATATATTATACAGTATATAT  2886

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2887  ATACATATATTTTTTTTGTTAGAGTTCTAGCCATTTTATTTCTCCGCAGGGTCCTTTCTCAGACATTACTGCAT  2960

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2961  GCTGTATATGGCGTTAGCTGTGTGTTGATCTTCTAAAAGATGATAGAGTTTACTGGTAATTGTGTAATCAGCTC  3034

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 3035  CTGCCTTTTTATTTTCTTGGGTTATTTACATGTCAGAGACATTTATAAAAAGTGAAAGGATAAAAAAAAAAAAA  3108

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 3109  AACAACTAATACCGGGCGCAGCATCTTTCCAGGTGTGGCTCTGCGCTAGGCCACCCCAGGTGGCCCCGCTTTCT  3182

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 3183  CCATTCTGCCCTGTGGCGTTAACAGACAGCAAGCAGCTGAACAAGCAGTACCGTCAGTACCCACTTGCTTTAGC  3256

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 3257  CCATTATGGGAATCTCTGATGCCTTTGTGACCACTGGAGAGTTTAATCCTCTTGGTTTATTTTATTTCCCACCT  3330

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 3331  TTGTGTGAGTGTGTATGAAAGAGAAGAAAATGCAATTTTTAGGTAATCTTTTTTTTTTTTCCCCTCCCCTGAAA  3404

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 3405  GTCTGGGAACCTGAGAGTCCTCGGGGAGGGGTCCTGGATGTGATGAGGGAAAGGGGGATTGGGGGATCCGGGAG  3478

Query  949  ---------------------------------------------------  948
                                                               
Sbjct 3479  GGTGGGGTTGTCTCTGACTTGACATTAAAAAGTGTTCCATGTCCCTCTTCA  3529

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