Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08191
- Subject:
- NR_147852.1
- Aligned Length:
- 3529
- Identities:
- 711
- Gaps:
- 2814
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGGCCGCAGCGCGCATTTGGGCTCCGAGGAAGTTGACCGAGGCGGCTGCCGCAGGATCCCGGGCCCGGATCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACGAAGCCCGCGCGGCCGTCTCCTCCGCGCGCCACCCCTGCGCCTCCCGCGAGCTCCACTTCCCATCTGCTATT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTTTCCGATTGTTTTCCGGTGGCGAGCCCGGCTCCGAAACTTACAAAGTGTTGGATGTCCCCCGTTCGAACTGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGACTGCAGACCGCCTCTGGGTAGCTGGATGAAGCCCACCCCGTCCCCTTCTGGTACCAAAGTGCTTACTCCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTCCAAAGTGCCGTGTCTGAACTGCCGCTGGGAAGAAGCGGCTCCTGAGACGCGCCCACACCTTTCACCTGCCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGCGCTTCCCCCTCCTCGGCCACCTTCCCGGCGGAAGCAGCGAGGAGGGAGCCCCCTTTGGCCGTCCTCCGTGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AACCGGTTTTCCGAGGCTGGCAAAAGCCGAGGCTGGATTTGGGGGAGGAATATTAGACTCGGAGGAGTCTGCGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCTTTTCTCCTCCCCGCGCCTCCCGGTCGCCGCGGGTTCACCGCTCAGTCCCCGCGCTCGCTCCGCACCCCACC 592
Query 1 ------------------------------------------------------------------------AT 2
||
Sbjct 593 CACTTCCTGTGCTCGCCCGGGGGGCGTGTGCCGTGCGGCTGCCGGAGTTCGGGGAAGTTGTGGCTGTCGAGAAT 666
Query 3 GGGGGTCTGTGGGTACCTGTTCCTGCCCTGGAAGTGCCTCGTGGTCGTGTCTCTCAGGCTGCTGTTCCTTGTAC 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGGGGTCTGTGGGTACCTGTTCCTGCCCTGGAAGTGCCTCGTGGTCGTGTCTCTCAGGCTGCTGTTCCTTGTAC 740
Query 77 CCACAGGAGTGCCCGTGCGCAGCGGAGATGCCACCTTCCCCAAAGCTATGGACAACGTGACGGTCCGGCAGGGG 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCACAGGAGTGCCCGTGCGCAGCGGAGATGCCACCTTCCCCAAAGCTATGGACAACGTGACGGTCCGGCAGGGG 814
Query 151 GAGAGCGCCACCCTCAGGTGCACTATTGACAACCGGGTCACCCGGGTGGCCTGGCTAAACCGCAGCACCATCCT 224
|||||||||||||||
Sbjct 815 GAGAGCGCCACCCTC----------------------------------------------------------- 829
Query 225 CTATGCTGGGAATGACAAGTGGTGCCTGGATCCTCGCGTGGTCCTTCTGAGCAACACCCAAACGCAGTACAGCA 298
Sbjct 830 -------------------------------------------------------------------------- 829
Query 299 TCGAGATCCAGAACGTGGATGTGTATGACGAGGGCCCTTACACCTGCTCGGTGCAGACAGACAACCACCCAAAG 372
Sbjct 830 -------------------------------------------------------------------------- 829
Query 373 ACCTCTAGGGTCCACCTCATTGTGCAAGTATCTCCCAAAATTGTAGAGATTTCTTCAGATATCTCCATTAATGA 446
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 830 --------------------------AGTATCTCCCAAAATTGTAGAGATTTCTTCAGATATCTCCATTAATGA 877
Query 447 AGGGAACAATATTAGCCTCACCTGCATAGCAACTGGTAGACCAGAGCCTACGGTTACTTGGAGACACATCTCTC 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 878 AGGGAACAATATTAGCCTCACCTGCATAGCAACTGGTAGACCAGAGCCTACGGTTACTTGGAGACACATCTCTC 951
Query 521 CCAAAGCGGTTGGCTTTGTGAGTGAAGACGAATACTTGGAAATTCAGGGCATCACCCGGGAGCAGTCAGGGGAC 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 952 CCAAAGCGGTTGGCTTTGTGAGTGAAGACGAATACTTGGAAATTCAGGGCATCACCAGGGAGCAGTCAGGGGAC 1025
Query 595 TACGAGTGCAGTGCCTCCAATGACGTGGCCGCGCCCGTGGTACGGAGAGTAAAGGTCACCGTGAACTATCCACC 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1026 TACGAGTGCAGTGCCTCCAATGACGTGGCCGCGCCCGTGGTACGGAGAGTAAAGGTCACCGTGAACTATCCACC 1099
Query 669 ATACATTTCAGAAGCCAAGGGTACAGGTGTCCCCGTGGGACAAAAGGGGACACTGCAGTGTGAAGCCTCAGCAG 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1100 ATACATTTCAGAAGCCAAGGGTACAGGTGTCCCCGTGGGACAAAAGGGGACACTGCAGTGTGAAGCCTCAGCAG 1173
Query 743 TCCCCTCAGCAGAATTCCAGTGGTACAAGGATGACAAAA----------------------------------- 781
|||||||||||||||||||||||||||||||||||||||
Sbjct 1174 TCCCCTCAGCAGAATTCCAGTGGTACAAGGATGACAAAAGAGCTGAAATCTCATTCACAGTTTGGTTATGATGG 1247
Query 782 -------------------------------------------------------------------------- 781
Sbjct 1248 GAAAGCTTCCTCCCCATGGTGGACGAATGGTGTCAAAACGGCCAGTGGGATCAATCAGCCTGACTTGCTCGCAG 1321
Query 782 ---------GACTGATTGAAGGAAAGAAAGGGGTGAAAGTGGAAAACAGACCTTTCCTCTCAAAACTCATCTTC 846
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1322 AATCCTCCCGACTGATTGAAGGAAAGAAAGGGGTGAAAGTGGAAAACAGACCTTTCCTCTCAAAACTCATCTTC 1395
Query 847 TTCAATGTCTCTGAACATGACTATGGGAACTACACTTGCGTGGCCTCCAACAAGCTGGGCCACACCAATGCCAG 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1396 TTCAATGTCTCTGAACATGACTATGGGAACTACACTTGCGTGGCCTCCAACAAGCTGGGCCACACCAATGCCAG 1469
Query 921 CATCATGCTATTTG------GTGAGACT--GTGCTC-------------------------------------- 948
|||||||||||||| .||||.|| |.||||
Sbjct 1470 CATCATGCTATTTGAACTAAATGAGCCTACGAGCTCAACTTTGTTGCAAGGTCCAGGCGCCGTCAGCGAGGTGA 1543
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1544 GCAACGGCACGTCGAGGAGGGCAGGCTGCGTCTGGCTGCTGCCTCTTCTGGTCTTGCACCTGCTTCTCAAATTT 1617
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1618 TGATGTGAGTGCCACTTCCCCACCCGGGAAAGGCTGCCGCCACCACCACCACCAACACAACAGCAATGGCAACA 1691
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1692 CCGACAGCAACCAATCAGATATATACAAATGAAATTAGAAGAAACACAGCCTCATGGGACAGAAATTTGAGGGA 1765
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1766 GGGGAACAAAGAATACTTTGGGGGGAAAAAAGTTTTAAAAAAGAAATTGAAAATTGCCTTGCAGATATTTAGGT 1839
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1840 ACAATGGAGTTTTCTTTTCCCAAACGGGAAGAACACAGCACACCCGGCTTGGACCCACTGCAAGCTGCATCGTG 1913
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1914 CAACCTCTTTGGTGCCAGTGTGGGCAAGGGCTCAGCCTCTCTGCCCACAGAGTGCCCCCACGTGGAACATTCTG 1987
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1988 GAGCTGGCCATCCCAAATTCAATCAGTCCATAGAGACGAACAGAATGAGACCTTCCGGCCCAAGCGTGGCGCTG 2061
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2062 CGGGCACTTTGGTAGACTGTGCCACCACGGCGTGTGTTGTGAAACGTGAAATAAAAAGAGCAAGAAAGAAAAAG 2135
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2136 GAAACAAAATAAGACCGTCTGACAGCAACAACGGTCCCACAAACAAGTCACAAAAGATACCGTTAAACTTTTTT 2209
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2210 TTTTTTTTATCATTTTACTACATGAACATCATGGATAACAAGGGATTCTGATTCATTATTAATTTCATTAATTA 2283
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2284 TATTTTCTGATATGAGTCTAGAACTTACTGCAAAAACAAGACAAAACTAAAAAAATACAACTGAGAAGGGTGAA 2357
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2358 GAGAAGTATGTTTGTTAAACAGTAAAAATGAATAGTATACTTCTTAACTAGGTTTACAACTGGTGGACCACACA 2431
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2432 CCAGGCACTAATCACCTGGTGAGGATTTGGCATATCCACCAAAAAATGCATCCGATTTAACCAACATCTCCACC 2505
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2506 AGCGCTACGGACTCCTCCCAATTCTGACATCTCTTGCAGACAATACTATGCTCTCTACACACTGTTTAGAAATG 2579
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2580 GAAAGGTGATCTGCACTGTATCTTGGGTTTGTTGGCTATGCTTCCTTTGATGACATATATTATACAGTATATAT 2653
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2654 ATACATATATTTTTTTTGTTAGAGTTCTAGCCATTTTATTTCTCCGCAGGGTCCTTTCTCAGACATTACTGCAT 2727
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2728 GCTGTATATGGCGTTAGCTGTGTGTTGATCTTCTAAAAGATGATAGAGTTTACTGGTAATTGTGTAATCAGCTC 2801
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2802 CTGCCTTTTTATTTTCTTGGGTTATTTACATGTCAGAGACATTTATAAAAAGTGAAAGGATAAAAAAAAAAAAA 2875
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2876 AACAACTAATACCGGGCGCAGCATCTTTCCAGGTGTGGCTCTGCGCTAGGCCACCCCAGGTGGCCCCGCTTTCT 2949
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2950 CCATTCTGCCCTGTGGCGTTAACAGACAGCAAGCAGCTGAACAAGCAGTACCGTCAGTACCCACTTGCTTTAGC 3023
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3024 CCATTATGGGAATCTCTGATGCCTTTGTGACCACTGGAGAGTTTAATCCTCTTGGTTTATTTTATTTCCCACCT 3097
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3098 TTGTGTGAGTGTGTATGAAAGAGAAGAAAATGCAATTTTTAGGTAATCTTTTTTTTTTTTCCCCTCCCCTGAAA 3171
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3172 GTCTGGGAACCTGAGAGTCCTCGGGGAGGGGTCCTGGATGTGATGAGGGAAAGGGGGATTGGGGGATCCGGGAG 3245
Query 949 --------------------------------------------------- 948
Sbjct 3246 GGTGGGGTTGTCTCTGACTTGACATTAAAAAGTGTTCCATGTCCCTCTTCA 3296
