Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08191
Subject:
NR_147852.1
Aligned Length:
3529
Identities:
711
Gaps:
2814

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCGGCCGCAGCGCGCATTTGGGCTCCGAGGAAGTTGACCGAGGCGGCTGCCGCAGGATCCCGGGCCCGGATCGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ACGAAGCCCGCGCGGCCGTCTCCTCCGCGCGCCACCCCTGCGCCTCCCGCGAGCTCCACTTCCCATCTGCTATT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTTTCCGATTGTTTTCCGGTGGCGAGCCCGGCTCCGAAACTTACAAAGTGTTGGATGTCCCCCGTTCGAACTGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGGACTGCAGACCGCCTCTGGGTAGCTGGATGAAGCCCACCCCGTCCCCTTCTGGTACCAAAGTGCTTACTCCT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTCCAAAGTGCCGTGTCTGAACTGCCGCTGGGAAGAAGCGGCTCCTGAGACGCGCCCACACCTTTCACCTGCCG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CGCGCTTCCCCCTCCTCGGCCACCTTCCCGGCGGAAGCAGCGAGGAGGGAGCCCCCTTTGGCCGTCCTCCGTGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AACCGGTTTTCCGAGGCTGGCAAAAGCCGAGGCTGGATTTGGGGGAGGAATATTAGACTCGGAGGAGTCTGCGC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCTTTTCTCCTCCCCGCGCCTCCCGGTCGCCGCGGGTTCACCGCTCAGTCCCCGCGCTCGCTCCGCACCCCACC  592

Query    1  ------------------------------------------------------------------------AT  2
                                                                                    ||
Sbjct  593  CACTTCCTGTGCTCGCCCGGGGGGCGTGTGCCGTGCGGCTGCCGGAGTTCGGGGAAGTTGTGGCTGTCGAGAAT  666

Query    3  GGGGGTCTGTGGGTACCTGTTCCTGCCCTGGAAGTGCCTCGTGGTCGTGTCTCTCAGGCTGCTGTTCCTTGTAC  76
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GGGGGTCTGTGGGTACCTGTTCCTGCCCTGGAAGTGCCTCGTGGTCGTGTCTCTCAGGCTGCTGTTCCTTGTAC  740

Query   77  CCACAGGAGTGCCCGTGCGCAGCGGAGATGCCACCTTCCCCAAAGCTATGGACAACGTGACGGTCCGGCAGGGG  150
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CCACAGGAGTGCCCGTGCGCAGCGGAGATGCCACCTTCCCCAAAGCTATGGACAACGTGACGGTCCGGCAGGGG  814

Query  151  GAGAGCGCCACCCTCAGGTGCACTATTGACAACCGGGTCACCCGGGTGGCCTGGCTAAACCGCAGCACCATCCT  224
            |||||||||||||||                                                           
Sbjct  815  GAGAGCGCCACCCTC-----------------------------------------------------------  829

Query  225  CTATGCTGGGAATGACAAGTGGTGCCTGGATCCTCGCGTGGTCCTTCTGAGCAACACCCAAACGCAGTACAGCA  298
                                                                                      
Sbjct  830  --------------------------------------------------------------------------  829

Query  299  TCGAGATCCAGAACGTGGATGTGTATGACGAGGGCCCTTACACCTGCTCGGTGCAGACAGACAACCACCCAAAG  372
                                                                                      
Sbjct  830  --------------------------------------------------------------------------  829

Query  373  ACCTCTAGGGTCCACCTCATTGTGCAAGTATCTCCCAAAATTGTAGAGATTTCTTCAGATATCTCCATTAATGA  446
                                      ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  830  --------------------------AGTATCTCCCAAAATTGTAGAGATTTCTTCAGATATCTCCATTAATGA  877

Query  447  AGGGAACAATATTAGCCTCACCTGCATAGCAACTGGTAGACCAGAGCCTACGGTTACTTGGAGACACATCTCTC  520
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  878  AGGGAACAATATTAGCCTCACCTGCATAGCAACTGGTAGACCAGAGCCTACGGTTACTTGGAGACACATCTCTC  951

Query  521  CCAAAGCGGTTGGCTTTGTGAGTGAAGACGAATACTTGGAAATTCAGGGCATCACCCGGGAGCAGTCAGGGGAC  594
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct  952  CCAAAGCGGTTGGCTTTGTGAGTGAAGACGAATACTTGGAAATTCAGGGCATCACCAGGGAGCAGTCAGGGGAC  1025

Query  595  TACGAGTGCAGTGCCTCCAATGACGTGGCCGCGCCCGTGGTACGGAGAGTAAAGGTCACCGTGAACTATCCACC  668
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1026  TACGAGTGCAGTGCCTCCAATGACGTGGCCGCGCCCGTGGTACGGAGAGTAAAGGTCACCGTGAACTATCCACC  1099

Query  669  ATACATTTCAGAAGCCAAGGGTACAGGTGTCCCCGTGGGACAAAAGGGGACACTGCAGTGTGAAGCCTCAGCAG  742
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1100  ATACATTTCAGAAGCCAAGGGTACAGGTGTCCCCGTGGGACAAAAGGGGACACTGCAGTGTGAAGCCTCAGCAG  1173

Query  743  TCCCCTCAGCAGAATTCCAGTGGTACAAGGATGACAAAA-----------------------------------  781
            |||||||||||||||||||||||||||||||||||||||                                   
Sbjct 1174  TCCCCTCAGCAGAATTCCAGTGGTACAAGGATGACAAAAGAGCTGAAATCTCATTCACAGTTTGGTTATGATGG  1247

Query  782  --------------------------------------------------------------------------  781
                                                                                      
Sbjct 1248  GAAAGCTTCCTCCCCATGGTGGACGAATGGTGTCAAAACGGCCAGTGGGATCAATCAGCCTGACTTGCTCGCAG  1321

Query  782  ---------GACTGATTGAAGGAAAGAAAGGGGTGAAAGTGGAAAACAGACCTTTCCTCTCAAAACTCATCTTC  846
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1322  AATCCTCCCGACTGATTGAAGGAAAGAAAGGGGTGAAAGTGGAAAACAGACCTTTCCTCTCAAAACTCATCTTC  1395

Query  847  TTCAATGTCTCTGAACATGACTATGGGAACTACACTTGCGTGGCCTCCAACAAGCTGGGCCACACCAATGCCAG  920
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1396  TTCAATGTCTCTGAACATGACTATGGGAACTACACTTGCGTGGCCTCCAACAAGCTGGGCCACACCAATGCCAG  1469

Query  921  CATCATGCTATTTG------GTGAGACT--GTGCTC--------------------------------------  948
            ||||||||||||||      .||||.||  |.||||                                      
Sbjct 1470  CATCATGCTATTTGAACTAAATGAGCCTACGAGCTCAACTTTGTTGCAAGGTCCAGGCGCCGTCAGCGAGGTGA  1543

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1544  GCAACGGCACGTCGAGGAGGGCAGGCTGCGTCTGGCTGCTGCCTCTTCTGGTCTTGCACCTGCTTCTCAAATTT  1617

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1618  TGATGTGAGTGCCACTTCCCCACCCGGGAAAGGCTGCCGCCACCACCACCACCAACACAACAGCAATGGCAACA  1691

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1692  CCGACAGCAACCAATCAGATATATACAAATGAAATTAGAAGAAACACAGCCTCATGGGACAGAAATTTGAGGGA  1765

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1766  GGGGAACAAAGAATACTTTGGGGGGAAAAAAGTTTTAAAAAAGAAATTGAAAATTGCCTTGCAGATATTTAGGT  1839

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1840  ACAATGGAGTTTTCTTTTCCCAAACGGGAAGAACACAGCACACCCGGCTTGGACCCACTGCAAGCTGCATCGTG  1913

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1914  CAACCTCTTTGGTGCCAGTGTGGGCAAGGGCTCAGCCTCTCTGCCCACAGAGTGCCCCCACGTGGAACATTCTG  1987

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1988  GAGCTGGCCATCCCAAATTCAATCAGTCCATAGAGACGAACAGAATGAGACCTTCCGGCCCAAGCGTGGCGCTG  2061

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2062  CGGGCACTTTGGTAGACTGTGCCACCACGGCGTGTGTTGTGAAACGTGAAATAAAAAGAGCAAGAAAGAAAAAG  2135

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2136  GAAACAAAATAAGACCGTCTGACAGCAACAACGGTCCCACAAACAAGTCACAAAAGATACCGTTAAACTTTTTT  2209

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2210  TTTTTTTTATCATTTTACTACATGAACATCATGGATAACAAGGGATTCTGATTCATTATTAATTTCATTAATTA  2283

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2284  TATTTTCTGATATGAGTCTAGAACTTACTGCAAAAACAAGACAAAACTAAAAAAATACAACTGAGAAGGGTGAA  2357

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2358  GAGAAGTATGTTTGTTAAACAGTAAAAATGAATAGTATACTTCTTAACTAGGTTTACAACTGGTGGACCACACA  2431

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2432  CCAGGCACTAATCACCTGGTGAGGATTTGGCATATCCACCAAAAAATGCATCCGATTTAACCAACATCTCCACC  2505

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2506  AGCGCTACGGACTCCTCCCAATTCTGACATCTCTTGCAGACAATACTATGCTCTCTACACACTGTTTAGAAATG  2579

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2580  GAAAGGTGATCTGCACTGTATCTTGGGTTTGTTGGCTATGCTTCCTTTGATGACATATATTATACAGTATATAT  2653

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2654  ATACATATATTTTTTTTGTTAGAGTTCTAGCCATTTTATTTCTCCGCAGGGTCCTTTCTCAGACATTACTGCAT  2727

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2728  GCTGTATATGGCGTTAGCTGTGTGTTGATCTTCTAAAAGATGATAGAGTTTACTGGTAATTGTGTAATCAGCTC  2801

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2802  CTGCCTTTTTATTTTCTTGGGTTATTTACATGTCAGAGACATTTATAAAAAGTGAAAGGATAAAAAAAAAAAAA  2875

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2876  AACAACTAATACCGGGCGCAGCATCTTTCCAGGTGTGGCTCTGCGCTAGGCCACCCCAGGTGGCCCCGCTTTCT  2949

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2950  CCATTCTGCCCTGTGGCGTTAACAGACAGCAAGCAGCTGAACAAGCAGTACCGTCAGTACCCACTTGCTTTAGC  3023

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 3024  CCATTATGGGAATCTCTGATGCCTTTGTGACCACTGGAGAGTTTAATCCTCTTGGTTTATTTTATTTCCCACCT  3097

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 3098  TTGTGTGAGTGTGTATGAAAGAGAAGAAAATGCAATTTTTAGGTAATCTTTTTTTTTTTTCCCCTCCCCTGAAA  3171

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 3172  GTCTGGGAACCTGAGAGTCCTCGGGGAGGGGTCCTGGATGTGATGAGGGAAAGGGGGATTGGGGGATCCGGGAG  3245

Query  949  ---------------------------------------------------  948
                                                               
Sbjct 3246  GGTGGGGTTGTCTCTGACTTGACATTAAAAAGTGTTCCATGTCCCTCTTCA  3296

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