Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08210
- Subject:
- XR_876585.2
- Aligned Length:
- 3349
- Identities:
- 855
- Gaps:
- 2458
Alignment
Query 1 -----------------ATGTCCAACCGAGTGGTCTGCCGAGAAGCCAGTCACGCCGGGAGCTGGTACACAGCC 57
|||||||||||||||||||||||.||||||||.||||||||||||||||||||.|||
Sbjct 1 GCGGCACAGGCACCAAGATGTCCAACCGAGTGGTCTGCCGGGAAGCCAGCCACGCCGGGAGCTGGTACACCGCC 74
Query 58 TCAGGACCGCATCTGAATGCACAGCTAGAAGGTTGGCTTTCACAAGTACAGTCTACAAAAAGACCTGCTAGAGC 131
||||||||.||.|||||.||.|||||.|||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 75 TCAGGACCTCAGCTGAACGCTCAGCTGGAAGGTTGGCTTTCACAAGTACAGTCTACGAAAAGACCTGCTAGAGC 148
Query 132 CATTATTGCCCCCCATGCAGGATATACGTACTGTGGGTCTTGTGCTGCCCATGCTTATAAACAAGTGGATCCGT 205
|||||||||.||||||||.|||||.||.|||||||||||.|||||||||||||||||.||||||||||||||.|
Sbjct 149 CATTATTGCACCCCATGCGGGATACACATACTGTGGGTCCTGTGCTGCCCATGCTTACAAACAAGTGGATCCAT 222
Query 206 CTATTACCCGGAGAATTTTCATCCTTGGGCCTTCTCATCATGTGCCCCTCTCTCGATGTGCACTTTCCAGTGTG 279
||.|||||||||||||||||||||||||||||||.||||||||||||||.||||||||||||||.|||||||||
Sbjct 223 CTGTTACCCGGAGAATTTTCATCCTTGGGCCTTCCCATCATGTGCCCCTGTCTCGATGTGCACTCTCCAGTGTG 296
Query 280 GATATATATAGGACACCTCTGTATGACCTTCGTATTGACCAAAAGATTTACGGAGAACTGTGGAAGACAGGAAT 353
||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||.||.||||||||||||||
Sbjct 297 GATATATATAGGACTCCTCTGTATGATCTTCGTATTGACCAAAAGATTTACGGAGAGCTATGGAAGACAGGAAT 370
Query 354 GTTTGAACGCATGTCTCTGCAGACAGATGAAGATGAACACAGTATTGAAATGCATTTGCCTTATACAGCTAAAG 427
|||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GTTTGAACGAATGTCTCTGCAGACAGATGAAGATGAACACAGTATTGAAATGCATTTGCCTTATACAGCTAAAG 444
Query 428 CCATGGAAAGCCATAAGGATGAGTTTACCATTATTCCTGTACTGGTTGGAGCTCTGAGTGAGTCAAAAGAACAG 501
||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCATGGAAAGCCATAAAGATGAGTTTACCATTATTCCTGTACTGGTTGGAGCTCTGAGTGAGTCAAAAGAACAG 518
Query 502 GAATTCGGAAAACTCTTCAGTAAATATCTAGCGGATCCTAGTAATCTCTTTGTGGTTTCTTCTGATTTCTGCCA 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAATTCGGAAAACTCTTCAGTAAATATCTAGCGGATCCTAGTAATCTCTTTGTGGTTTCTTCTGATTTCTGCCA 592
Query 576 TTGG---------------------------------------------------------------------- 579
.|||
Sbjct 593 CTGGGAAAGCGTGCTCTGGAATGGATTCACAAATGAGCTACCCTCCTTCCCTCAAAGAGTAAGGTTTCTGCTTT 666
Query 580 -------------------------------------------------------------------------- 579
Sbjct 667 ACAGGATTTTTTTTTCCTTGGGTTATTTTTCCTCTCATCTTTTGAATTTGAAAAGAACTGAGGGAAGGCACCTG 740
Query 580 -------------------------------------------------------------------------- 579
Sbjct 741 AAGAAACCACTGATACACTCACTAGGGAGTTGCAGAGCTTGTCCCGCCCCTAGGGCGGAGTCCATGCTCCTAAA 814
Query 580 -------------------------------------------------------------------------- 579
Sbjct 815 GCTAAAGCTCACACTTGAAGTGGAAACAGGGGCTCAGAGAATCCATTTTCCCAGTGTGCCTTCTGAAAGGATAA 888
Query 580 ------GGTCAAAGGTTCCGTTACAGTTACTATGATGAATCCCAGGGGGAGATTTATAGATCCATTGAACATCT 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GTCTCAGGTCAAAGGTTCCGTTACAGTTACTATGATGAATCCCAGGGGGAGATTTATAGATCCATTGAACATCT 962
Query 648 AGATAAAATGGGTATGAGTATTATAGAACAATTAGACCCTGTATCTTTTAGCAATTACTTGAAGAAATACCATA 721
||||||||||||||||||||||||||||||||||||.||||||||||||||||||||.|||||||||||.||||
Sbjct 963 AGATAAAATGGGTATGAGTATTATAGAACAATTAGATCCTGTATCTTTTAGCAATTATTTGAAGAAATATCATA 1036
Query 722 ATACTATATGTGGAAGACATCCCATTGGGGTGTTATTAAATGCTATCACAGAGCTCCAGAAGAATGGAATGAAT 795
|||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 1037 ATACTATATGTGGAAGACATCCCATTGGGGTGTTATTAAATGCTATCACAGAGCTTCAGAAGAATGGAATGAAT 1110
Query 796 ATGAGTTTTTCGTTTTTGAATTATGCCCAGTCGAGCCAGTGTAGAAACTGGCAAGACAGTTCAGTGAGTTATGC 869
|||||.|||||.||||||||||||||||||||||||||||||||||.||||||||||||||||||.|||||.||
Sbjct 1111 ATGAGCTTTTCCTTTTTGAATTATGCCCAGTCGAGCCAGTGTAGAAGCTGGCAAGACAGTTCAGTCAGTTACGC 1184
Query 870 AGCTGGAGCACTCACGGTCCAC---------------------------------------------------- 891
||||||||||||||||||||||
Sbjct 1185 AGCTGGAGCACTCACGGTCCACTGAAGCTCCGATCCTCAGGGACACCACCTGCACAGACTCGTACTCTGTCCAG 1258
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1259 GGTCCAGCCTAGCCTTTACCAAGATGTTGGTTCTGGTGTGGGGGGATTCTGAAACCTCAGACTAATAGAACTCT 1332
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1333 CTTCTTCTTTTCTAGTAGGTGTAGTCCTCCTTAATTTCAACTCATTTTAAAAATGCTTTCTAGTTTGAGGCAGT 1406
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1407 GGAAGGAAGGCTGGAATCAAAATATTTGCCCAAATTGGCACACAGTGACTTGTAAAGCATTTAGCATATCTGAA 1480
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1481 ATTTGCACTCTTTGCAGACTCATGCACATATATTCCGCTTTCAGAATAGTTTTGCAAATTGTACACAGACAAAG 1554
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1555 GGTGGAAGCTTTTTAATAAAAGAAACTGCATTTATAAATGATCTGTATTAGAATATAAGAAATCTCCAGTTATA 1628
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1629 GACAATTACTACCCATGTTGTACAACAGATACCTTCTATTTTAGTTGCTAATAAAGGGCTACACAACTCAAAAT 1702
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1703 AGTCTGATTTAAACTTATTGCTTTGTGGTATAAATGGAAATTGTTTTTTATTAATTCTATCTCAGAATTTTTGT 1776
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1777 TAAAATGGCAAGCCTCAGCTTCGATGTAATAATGTTAAAATTATTTTATTTTTACATTTATGTGATTTTTTTTT 1850
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1851 AAATCACAGAAATTATAGTCATATTTTAAAGTTAACTTTCAAAACTATAGTCATTGCATTTTTGTGTGTGACAT 1924
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1925 ACCCTCATGTCATTATTATATTGTACTACAATATAAATTCAAGGATGCTTTAAAAACAAGTAGATTTATTCCTT 1998
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1999 TCCTCCAATGACTGTGTTCGGTAGTCTGCACATGAAGATATTGAAGAGTGTCATTAGTTGTGTTTCAAGTTGTT 2072
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2073 GCAGACCATCACCACTATGGTTTTTTGTTTGTTTGTTTGTTTTTATTGCTTTAAGCAATTTAACTCTTTCACTT 2146
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2147 GAATTTTTAGCAAGAAATCATTAACAATATTAGTAACAAGGCCTATTGGACTTCTGATAGTCCTGCAAAAAATT 2220
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2221 TGTTTGGGGAGGGCATGATTTTTGGTGCGGCTCTTCCAACTAAAATAATGGTATGGTGTTGTATTTCTTTATCA 2294
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2295 TAGATTTATTCTAGTCATTTTGGGGAGGAAAGTGTTAACTCATTAAGCCATCATGCATGTTGTTCATCATCCCT 2368
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2369 GTTTTACCAACACTGGATGTTTCTATAACATTGGAGAGTGTTAGTCTTCAGTGTTATACCCAAGTAGCACAAGC 2442
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2443 TTTAGATGCCTTGCACCAATTTTCTTTTGGAGATTTACGTTTCTTACTTATTAAATACCAATTTTCTATTCTCA 2516
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2517 AGAATGGGAGAAAATAATACTACCTTTTAGATTTAAAATTTACCTACTTATACATGTAGGAAATATACTCTTAT 2590
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2591 ACATCAGTGTTTTATTTTCCATTATTTAGATACGCTTTTGAGTACTATAAATATTTATTTCTTGTTTAATACAG 2664
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2665 ATTATAAAAATTTCTGAATTGACAATAGTGAATTTTTAAAATAATGTTTTCTGAGTATAGAATTTGAAAATACT 2738
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2739 GAAAAGTCAGAAGAAAAAATCTATTACCTACAATCTCACTACTCCAGAGATAACACTGTTAAATGTTTTTCTGT 2812
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2813 ATTTACTTGTAGTCCTTGTGTTTTTTATGAGTGTGTATGTGTGTGTGTGTGTGTGTGCAACAACAGAATTGAGA 2886
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2887 TTATAGTGCCCATACATTTGCGTTATGCCCTGTTATCCTAAGTATCTACTACCTGTGTCTCTGAAAGCACTATT 2960
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2961 TTAAAAATGCCTGCCTAATATGCTATACTGTATGAAAATAGTTCTCTCTTTGGATGTTAGGCTGTTTCTAATTT 3034
Query 892 -------------------------------------------------------------------------- 891
Sbjct 3035 TCCTCAATTTTATAATGGTACGGACATTCTGTGTAAATTAGACCCAGTCTCTAGGATATAATCATGAAAATGAA 3108
Query 892 -------------------------------------------------------------------------- 891
Sbjct 3109 ATAAATGGTTTACATGATAATTTTGTAGGCCCTTTAAAAGTATGCCAAATTATATTTTCAATAGATTGTATCAA 3182
Query 892 -------------------------------------------------------------------------- 891
Sbjct 3183 ATTAACAGCACCCCCACATCAGCATCGTTTCTTTTAATTTTTGAAAAATTGTTAAGCAAGTAATTGTTTCTTTT 3256
Query 892 -------------------------------------------------------------------------- 891
Sbjct 3257 TTAAAGACTTTCTTTCGAATTAGTCATTTATTGTCTTTTATAAATTTAGAATGTTTTTTTTGAAAAACAACATT 3330
Query 892 ------------------- 891
Sbjct 3331 AAAGAGACGTCTAGTTCTA 3349
