Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08210
- Subject:
- XR_876587.2
- Aligned Length:
- 3382
- Identities:
- 638
- Gaps:
- 2716
Alignment
Query 1 -----------------ATGTCCAACCGAGTGGTCTGCCGAGAAGCCAGTCACGCCGGGAGCTGGTACACAGCC 57
|||||||||||||||||||||||.||||||||.||||||||||||||||||||.|||
Sbjct 1 GCGGCACAGGCACCAAGATGTCCAACCGAGTGGTCTGCCGGGAAGCCAGCCACGCCGGGAGCTGGTACACCGCC 74
Query 58 TCAGGACCGCATCTGAATGCACAGCTAGAAGGTTGGCTTTCACAAGTACAGTCTACAAAAAGACCTGCTAGAGC 131
||||||||.||.|||||.||.|||||.|||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 75 TCAGGACCTCAGCTGAACGCTCAGCTGGAAGGTTGGCTTTCACAAGTACAGTCTACGAAAAGACCTGCTAGAGC 148
Query 132 CATTATTGCCCCCCATGCAGGATATACGTACTGTGGGTCTTGTGCTGCCCATGCTTATAAACAAGTGGATCCGT 205
|||||||||.||||||||.|||||.||.|||||||||||.|||||||||||||||||.||||||||||||||.|
Sbjct 149 CATTATTGCACCCCATGCGGGATACACATACTGTGGGTCCTGTGCTGCCCATGCTTACAAACAAGTGGATCCAT 222
Query 206 CTATTACCCGGAGAATTTTCATCCTTGGGCCTTCTCATCATGTGCCCCTCTCTCGATGTGCACTTTCCAGTGTG 279
||.||||
Sbjct 223 CTGTTAC------------------------------------------------------------------- 229
Query 280 GATATATATAGGACACCTCTGTATGACCTTCGTATTGACCAAAAGATTTACGGAGAACTGTGGAAGACAGGAAT 353
Sbjct 230 -------------------------------------------------------------------------- 229
Query 354 GTTTGAACGCATGTCTCTGCAGACAGATGAAGATGAACACAGTATTGAAATGCATTTGCCTTATACAGCTAAAG 427
Sbjct 230 -------------------------------------------------------------------------- 229
Query 428 CCATGGAAAGCCATAAGGATGAGTTTACCATTATTCCTGTACTGGTTGGAGCTCTGAGTGAGTCAAAAGAACAG 501
||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 230 ----------CCATAAAGATGAGTTTACCATTATTCCTGTACTGGTTGGAGCTCTGAGTGAGTCAAAAGAACAG 293
Query 502 GAATTCGGAAAACTCTTCAGTAAATATCTAGCGGATCCTAGTAATCTCTTTGTGGTTTCTTCTGATTTCTGCCA 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 294 GAATTCGGAAAACTCTTCAGTAAATATCTAGCGGATCCTAGTAATCTCTTTGTGGTTTCTTCTGATTTCTGCCA 367
Query 576 TTGG---------------------------------------------------------------------- 579
.|||
Sbjct 368 CTGGGTGGTTTACAGATCAGTTCCAATCAATTTACTAAAAAGCGTGCTCTGGAATGGATTCACAAATGAGCTAC 441
Query 580 -------------------------------------------------------------------------- 579
Sbjct 442 CCTCCTTCCCTCAAAGAGTAAGGTTTCTGCTTTACAGGATTTTTTTTTCCTTGGGTTATTTTTCCTCTCATCTT 515
Query 580 -------------------------------------------------------------------------- 579
Sbjct 516 TTGAATTTGAAAAGAACTGAGGGAAGGCACCTGAAGAAACCACTGATACACTCACTAGGGAGTTGCAGAGCTTG 589
Query 580 -------------------------------------------------------------------------- 579
Sbjct 590 TCCCGCCCCTAGGGCGGAGTCCATGCTCCTAAAGCTAAAGCTCACACTTGAAGTGGAAACAGGGGCTCAGAGAA 663
Query 580 ---------------------------------------GGTCAAAGGTTCCGTTACAGTTACTATGATGAATC 614
|||||||||||||||||||||||||||||||||||
Sbjct 664 TCCATTTTCCCAGTGTGCCTTCTGAAAGGATAAGTCTCAGGTCAAAGGTTCCGTTACAGTTACTATGATGAATC 737
Query 615 CCAGGGGGAGATTTATAGATCCATTGAACATCTAGATAAAATGGGTATGAGTATTATAGAACAATTAGACCCTG 688
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 738 CCAGGGGGAGATTTATAGATCCATTGAACATCTAGATAAAATGGGTATGAGTATTATAGAACAATTAGATCCTG 811
Query 689 TATCTTTTAGCAATTACTTGAAGAAATACCATAATACTATATGTGGAAGACATCCCATTGGGGTGTTATTAAAT 762
||||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 812 TATCTTTTAGCAATTATTTGAAGAAATATCATAATACTATATGTGGAAGACATCCCATTGGGGTGTTATTAAAT 885
Query 763 GCTATCACAGAGCTCCAGAAGAATGGAATGAATATGAGTTTTTCGTTTTTGAATTATGCCCAGTCGAGCCAGTG 836
||||||||||||||.|||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||
Sbjct 886 GCTATCACAGAGCTTCAGAAGAATGGAATGAATATGAGCTTTTCCTTTTTGAATTATGCCCAGTCGAGCCAGTG 959
Query 837 TAGAAACTGGCAAGACAGTTCAGTGAGTTATGCAGCTGGAGCACTCACGGTCCAC------------------- 891
|||||.||||||||||||||||||.|||||.||||||||||||||||||||||||
Sbjct 960 TAGAAGCTGGCAAGACAGTTCAGTCAGTTACGCAGCTGGAGCACTCACGGTCCACTGAAGCTCCGATCCTCAGG 1033
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1034 GACACCACCTGCACAGACTCGTACTCTGTCCAGGGTCCAGCCTAGCCTTTACCAAGATGTTGGTTCTGGTGTGG 1107
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1108 GGGGATTCTGAAACCTCAGACTAATAGAACTCTCTTCTTCTTTTCTAGTAGGTGTAGTCCTCCTTAATTTCAAC 1181
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1182 TCATTTTAAAAATGCTTTCTAGTTTGAGGCAGTGGAAGGAAGGCTGGAATCAAAATATTTGCCCAAATTGGCAC 1255
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1256 ACAGTGACTTGTAAAGCATTTAGCATATCTGAAATTTGCACTCTTTGCAGACTCATGCACATATATTCCGCTTT 1329
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1330 CAGAATAGTTTTGCAAATTGTACACAGACAAAGGGTGGAAGCTTTTTAATAAAAGAAACTGCATTTATAAATGA 1403
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1404 TCTGTATTAGAATATAAGAAATCTCCAGTTATAGACAATTACTACCCATGTTGTACAACAGATACCTTCTATTT 1477
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1478 TAGTTGCTAATAAAGGGCTACACAACTCAAAATAGTCTGATTTAAACTTATTGCTTTGTGGTATAAATGGAAAT 1551
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1552 TGTTTTTTATTAATTCTATCTCAGAATTTTTGTTAAAATGGCAAGCCTCAGCTTCGATGTAATAATGTTAAAAT 1625
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1626 TATTTTATTTTTACATTTATGTGATTTTTTTTTAAATCACAGAAATTATAGTCATATTTTAAAGTTAACTTTCA 1699
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1700 AAACTATAGTCATTGCATTTTTGTGTGTGACATACCCTCATGTCATTATTATATTGTACTACAATATAAATTCA 1773
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1774 AGGATGCTTTAAAAACAAGTAGATTTATTCCTTTCCTCCAATGACTGTGTTCGGTAGTCTGCACATGAAGATAT 1847
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1848 TGAAGAGTGTCATTAGTTGTGTTTCAAGTTGTTGCAGACCATCACCACTATGGTTTTTTGTTTGTTTGTTTGTT 1921
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1922 TTTATTGCTTTAAGCAATTTAACTCTTTCACTTGAATTTTTAGCAAGAAATCATTAACAATATTAGTAACAAGG 1995
Query 892 -------------------------------------------------------------------------- 891
Sbjct 1996 CCTATTGGACTTCTGATAGTCCTGCAAAAAATTTGTTTGGGGAGGGCATGATTTTTGGTGCGGCTCTTCCAACT 2069
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2070 AAAATAATGGTATGGTGTTGTATTTCTTTATCATAGATTTATTCTAGTCATTTTGGGGAGGAAAGTGTTAACTC 2143
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2144 ATTAAGCCATCATGCATGTTGTTCATCATCCCTGTTTTACCAACACTGGATGTTTCTATAACATTGGAGAGTGT 2217
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2218 TAGTCTTCAGTGTTATACCCAAGTAGCACAAGCTTTAGATGCCTTGCACCAATTTTCTTTTGGAGATTTACGTT 2291
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2292 TCTTACTTATTAAATACCAATTTTCTATTCTCAAGAATGGGAGAAAATAATACTACCTTTTAGATTTAAAATTT 2365
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2366 ACCTACTTATACATGTAGGAAATATACTCTTATACATCAGTGTTTTATTTTCCATTATTTAGATACGCTTTTGA 2439
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2440 GTACTATAAATATTTATTTCTTGTTTAATACAGATTATAAAAATTTCTGAATTGACAATAGTGAATTTTTAAAA 2513
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2514 TAATGTTTTCTGAGTATAGAATTTGAAAATACTGAAAAGTCAGAAGAAAAAATCTATTACCTACAATCTCACTA 2587
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2588 CTCCAGAGATAACACTGTTAAATGTTTTTCTGTATTTACTTGTAGTCCTTGTGTTTTTTATGAGTGTGTATGTG 2661
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2662 TGTGTGTGTGTGTGTGCAACAACAGAATTGAGATTATAGTGCCCATACATTTGCGTTATGCCCTGTTATCCTAA 2735
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2736 GTATCTACTACCTGTGTCTCTGAAAGCACTATTTTAAAAATGCCTGCCTAATATGCTATACTGTATGAAAATAG 2809
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2810 TTCTCTCTTTGGATGTTAGGCTGTTTCTAATTTTCCTCAATTTTATAATGGTACGGACATTCTGTGTAAATTAG 2883
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2884 ACCCAGTCTCTAGGATATAATCATGAAAATGAAATAAATGGTTTACATGATAATTTTGTAGGCCCTTTAAAAGT 2957
Query 892 -------------------------------------------------------------------------- 891
Sbjct 2958 ATGCCAAATTATATTTTCAATAGATTGTATCAAATTAACAGCACCCCCACATCAGCATCGTTTCTTTTAATTTT 3031
Query 892 -------------------------------------------------------------------------- 891
Sbjct 3032 TGAAAAATTGTTAAGCAAGTAATTGTTTCTTTTTTAAAGACTTTCTTTCGAATTAGTCATTTATTGTCTTTTAT 3105
Query 892 ---------------------------------------------------- 891
Sbjct 3106 AAATTTAGAATGTTTTTTTTGAAAAACAACATTAAAGAGACGTCTAGTTCTA 3157
