Nucleotide Global Alignment

Description

• Query: ccsbBroad304_08227
• Subject: NR_104213.2
• Aligned Length: 1401
• Identities: 565
• Gaps: 810

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGAAGCCGAGCTGAGCGGATCCTCACACGACTGTGATCCGATTCTTTCCAGCGGCTTCTGCAACCAAGCGGGTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTACCCCCGGTCCTCCGCGTCTCCAGTCCTCGCACCTGGAACCCCAACGTCCCCGAGAGTCCCCGAATCCCCGC  148

Query    1  -------------------ATGAGCGGTGCTCCGACGGCCGGGGCAGCCCTGATGCTCTGCGCCGCCACCGCCG  55
                               |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TCCCAGGCTACCTAAGAGGATGAGCGGTGCTCCGACGGCCGGGGCAGCCCTGATGCTCTGCGCCGCCACCGCCG  222

Query   56  TGCTACTGAGCGCTCAGGGCGGACCCGTGCAGTCCAAGTCGCCGCGCTTTGCGTCCTGGGACGAGATGAATGTC  129
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TGCTACTGAGCGCTCAGGGCGGACCCGTGCAGTCCAAGTCGCCGCGCTTTGCGTCCTGGGACGAGATGAATGTC  296

Query  130  CTGGCGCACGGACTCCTGCAGCTCGGCCAGGGGCTGCGCGAACACGCGGAGCGCACCCGCAGTCAGCTGAGCGC  203
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CTGGCGCACGGACTCCTGCAGCTCGGCCAGGGGCTGCGCGAACACGCGGAGCGCACCCGCAGTCAGCTGAGCGC  370

Query  204  GCTGGAGCGGCGCCTGAGCGCGTGCGGGTCCGCCTGTCAGGGAACCGAGGGGTCCACCGACCTCCCGTTAGCCC  277
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GCTGGAGCGGCGCCTGAGCGCGTGCGGGTCCGCCTGTCAGGGAACCGAGGGGTCCACCGACCTCCCGTTAGCCC  444

Query  278  CTGAGAGCCGGGTGGACCCTGAGGTCCTTCACAGCCTGCAGACACAACTCAAGGCTCAGAACAGCAGGATCCAG  351
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CTGAGAGCCGGGTGGACCCTGAGGTCCTTCACAGCCTGCAGACACAACTCAAGGCTCAGAACAGCAGGATCCAG  518

Query  352  CAACTCTTCCACAAGGTGGCCCAGCAGCAGCGGCACCTGGAGAAGCAGCACCTGCGAATTCAGCATCTGCAAAG  425
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CAACTCTTCCACAAGGTGGCCCAGCAGCAGCGGCACCTGGAGAAGCAGCACCTGCGAATTCAGCATCTGCAAAG  592

Query  426  CCAGTTTGGCCTCCTGGACCACAAGCACCTAGACCATGAGGTGGCCAAGCCTGCCCGAAGAAAGAGGCTGCCCG  499
            ||||..||||||         |||                 ||||                             
Sbjct  593  CCAGACTGGCCT---------CAA-----------------TGGC-----------------------------  611

Query  500  AGATGG-CCCAGCCAGTTGACCCGGCTCACAATGTCAGCCGCCTGCACCGGCTGCCCAGGGATTGCCAGGAGCT  572
                || |.|||              |||||.||.|.|        ||.||  |.||||||.|||        |
Sbjct  612  ----GGACTCAG--------------TCACATTGACTG--------ACGGG--GACCAGGGCTTG--------T  649

Query  573  GTTCCAGGTTGGG--GAGAG-GCAGAGTGGACTATTTGAAATCCAGCCTCAGGGGTCTCCGCCATTTTTGGTGA  643
            |        ||||  ||||| ||                       |||||.||           |..||||| 
Sbjct  650  G--------TGGGTCGAGAGCGC-----------------------CCTCATGG-----------TGCTGGTG-  680

Query  644  ACTGCAAGATGACCTCAGATGGAGG----CTGG----ACAGTAATTCAG-AGGCGCCACGATGGCTCAGTGGAC  708
             |||          |....||.|||    ||||    |||       || ||||||||  ||||          
Sbjct  681  -CTG----------TTGTGTGTAGGTCCCCTGGGGACACA-------AGCAGGCGCCA--ATGG----------  724

Query  709  TTCAACCGGCCCTGGGAAGCCTA-CAAGGCGGGGTTTGGGGATCCCCACGGCGAGTTCTGGCTGGGTCTGGAGA  781
                                 || |..|||||.|          |.|||  .|||||||         ||||..
Sbjct  725  ---------------------TATCTGGGCGGAG----------CTCAC--AGAGTTCT---------TGGAAT  756

Query  782  AGGTGCATAGCATCACGGGGGACCGC--AACAGCCGCCTGGCCGTGCAGCTGCGGGACTGGGATGGCAACGCCG  853
            |     |.||||         |||.|  ||||                                          
Sbjct  757  A-----AAAGCA---------ACCTCAGAACA------------------------------------------  774

Query  854  AGTTGCTGCAGTTCTCCGTGCACCTGGGTGGCGAGGACACGGCCTATAGCCTGCAGCTCACTGCACCCGTGGCC  927
                                                                                      
Sbjct  775  --------------------------------------------------------------------------  774

Query  928  GGCCAGCTGGGCGCCACCACCGTCCCACCCAGCGGCCTCTCCGTACCCTTCTCCACTTGGGACCAGGATCACGA  1001
                                                                                      
Sbjct  775  --------------------------------------------------------------------------  774

Query 1002  CCTCCGCAGGGACAAGAACTGCGCCAAGAGCCTCTCTGGAGGCTGGTGGTTTGGCACCTGCAGCCATTCCAACC  1075
                                                                                      
Sbjct  775  --------------------------------------------------------------------------  774

Query 1076  TCAACGGCCAGTACTTCCGCTCCATCCCACAGCAGCGGCAGAAGCTTAAGAAGGGAATCTTCTGGAAGACCTGG  1149
                                                                                      
Sbjct  775  --------------------------------------------------------------------------  774

Query 1150  CGGGGCCGCTACTACCCACTGCAGGCCACCACCATGTTGATCCAGCCCATGGCAGCAGAGGCAGCCTCC  1218
                                                                                 
Sbjct  775  ---------------------------------------------------------------------  774