Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08251
- Subject:
- NR_136634.2
- Aligned Length:
- 2882
- Identities:
- 1222
- Gaps:
- 1653
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CACTTGGGACGGGTCCCTGAGTAGGTGAGGAGGTGGGTAGGAGCTTGCTTATAGAAAAGTGGAATCGAGTAGTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTTGCTGGTGGAGCCGCTGCCGCCAGGGAACTCAGGGCCGGCTCCTGTTCCTTCAAGAGTGCTGGAGGCCAAAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTGAAATACAAGTTTAATGTTCCTCGTCGGGCAAAAGATAAGGATCCGATCTCCCCCGGCCCGGTGTGCAGCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGCGACCAACCCCGACCCGGGTTAAAACTCCCAGGGACTCTTCGCTGCTGCCACCTCTTGTTCTCTCCCCCGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCCCACTCGGGGTCTCCCTCAGGGCCGGGAGGCACAGCGGTCCCTGCTTGCTGAAGGGCTGGATGTACGCATCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCAGGTTCCCGCGGACTTGGGGGCGCCCGCTGAGCCCCGGCGCCCGCAGAAGACTTGTGTTTGCCTCCTGCAGC 444
Query 1 --------------------------------ATGATCACTGGTGTGTTCAGCATGCGCTTGTGGACCCCAGTG 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTCAACCCGGAGGGCAGCGAGGGCCTACCACCATGATCACTGGTGTGTTCAGCATGCGCTTGTGGACCCCAGTG 518
Query 43 GGCGTCCTGACCTCGCTGGCGTACTGCCTGCACCAGCGGCGGGTGGCCCTGGCCGAGCTGCAGGAGGCCGATGG 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GGCGTCCTGACCTCGCTGGCGTACTGCCTGCACCAGCGGCGGGTGGCCCTGGCCGAGCTGCAGGAGGCCGATGG 592
Query 117 CCAGTGTCCGGTCGACCGCAGCCTGCTGAAGTTGAAAATGGTGCAGGTCGTGTTTCGACACGGGGCTCGGAGTC 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCAGTGTCCGGTCGACCGCAGCCTGCTGAAGTTGAAAATGGTGCAGGTCGTGTTTCGACACGGGGCTCGGAGTC 666
Query 191 CTCTCAAGCCGCTCCCGCTGGAGGAG------------------------------------------------ 216
||||||||||||||||||||||||||
Sbjct 667 CTCTCAAGCCGCTCCCGCTGGAGGAGCAGGTGAGAGGTCGGCCCGGGCTGGGGCTGGTGGGGCGAGGACCGTGT 740
Query 217 -------------------------------------------------------------------------- 216
Sbjct 741 GCCAGGCCAGGAGTCTCGCCCTGACACACATCTTCAGAGCTTTACTCGCGCGGAGCGGGGCTCGGGTTGGGTCC 814
Query 217 -------------------------------------------------------------------------- 216
Sbjct 815 AGAAGAAGGGAAAACAGCAGTAGCCAGTGACTCCCCAGGCTCTTGAGCAAAGGACCTGCTGGGGTTAGGACAGC 888
Query 217 -------------------------------------------------------------------------- 216
Sbjct 889 CCCGGAACTTCCAGTTTTGCCCTGATGGCGCAGCCATCAGTAAGCGCTGCTTAAGACGCATGGGAGTCGCCTGG 962
Query 217 --------------------------------------------------CAGGTAGAGTGGAACCCCCAGCTA 240
||||||||||||||||||||||||
Sbjct 963 GGATCCTGCTACGTTGCAGATTCTGATTCAGCAGGTGTGGAGTAGTGCCCCAGGTAGAGTGGAACCCCCAGCTA 1036
Query 241 TTAGAGGTCCCACCCCAAACTCAGTTTGATTACACAGTCACCAATCTAGCTGGTGGTCCGAAACCATATTCTCC 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TTAGAGGTCCCACCCCAAACTCAGTTTGATTACACAGTCACCAATCTAGCTGGTGGTCCGAAACCATATTCTCC 1110
Query 315 TTACGACTCTCAATACCATGAGACCACCCTGAAGGGGGGCATGTTTGCTGGGCAGCTGACCAAGGTGGGCATGC 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TTACGACTCTCAATACCATGAGACCACCCTGAAGGGGGGCATGTTTGCTGGGCAGCTGACCAAGGTGGGCATGC 1184
Query 389 AGCAAATGTTTGCCTTGGGAGAGAGACTGAGGAAGAACTATGTGGAAGACATTCCCTTTCTTTCACCAACCTTC 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AGCAAATGTTTGCCTTGGGAGAGAGACTGAGGAAGAACTATGTGGAAGACATTCCCTTTCTTTCACCAACCTTC 1258
Query 463 AACCCACAGGAGGTCTTTATTCGTTCCACTAACATTTTTCGGAATCTGGAGTCCACCCGTTGTTTGCTGGCTGG 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AACCCACAGGAGGTCTTTATTCGTTCCACTAACATTTTTCGGAATCTGGAGTCCACCCGTTGTTTGCTGGCTGG 1332
Query 537 GCTTTTCCAGTGTCAGAAAGAA---------------------------------------------------- 558
||||||||||||||||||||||
Sbjct 1333 GCTTTTCCAGTGTCAGAAAGAAGATAAGAGAACCAAGACACAGAGAGGCTCAGTGACTTGCCCAGGGACACAAA 1406
Query 559 ---GGACCCATCATCATCCACACTGATGAAGCAGATTCAGAAGTCTTGTATCCCAACTACCAAAGCTGCTGGAG 629
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 ACTGGACCCATCATCATCCACACTGATGAAGCAGATTCAGAAGTCTTGTATCCCAACTACCAAAGCTGCTGGAG 1480
Query 630 CCTGAGGCAGAGAACCAGAGGCCGGAGGCAGACTGCCTCTTTACAGCCAGGAATCTCAGAGGATTTGAAAAAGG 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CCTGAGGCAGAGAACCAGAGGCCGGAGGCAGACTGCCTCTTTACAGCCAGGAATCTCAGAGGATTTGAAAAAGG 1554
Query 704 TGAAGGACAGGATGGGCATTGACAGTAGTGATAAAGTGGACTTCTTCATCCTCCTGGACAACGTGGCTGCCGAG 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TGAAGGACAGGATGGGCATTGACAGTAGTGATAAAGTGGACTTCTTCATCCTCCTGGACAACGTGGCTGCCGAG 1628
Query 778 CAGGCACACAA-----CCTCC--CAAGCTGCCCCATGCTGAAGAGATTTGCACGGATGATCGAACAGAGAGCTG 844
|||| |.|| .|||| ||.|.| ||||| ||| |.||||| |||||
Sbjct 1629 CAGG---AGAAGATGGGCTCCTGCAGGTT---CCATG--GAA------------GCTGATC--------AGCTG 1674
Query 845 TGGACACATCCTTGTACATACTGCCCAAGGA---AGACAGGGAAAGTCTTCAGATGGCAGTAGGCCCATTCCTC 915
||| || || .||||||||||||||||||||||||||||||||||||
Sbjct 1675 ------------------------CCA--GAATCAG-TAGGGAAAGTCTTCAGATGGCAGTAGGCCCATTCCTC 1721
Query 916 CACATCCTAGAGAGCAACCTGCTGAAAGCCATGGACTCTGCCACTGCCCCCGACAAGATCAGAAAGCTGTATCT 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1722 CACATCCTAGAGAGCAACCTGCTGAAAGCCATGGACTCTGCCACTGCCCCCGACAAGATCAGAAAGCTGTATCT 1795
Query 990 CTATGCGGCTCATGATGTGACCTTCATACCGCTCTTAATGACCCTGGGGATTTTTGACCACAAATGGCCACCGT 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1796 CTATGCGGCTCATGATGTGACCTTCATACCGCTCTTAATGACCCTGGGGATTTTTGACCACAAATGGCCACCGT 1869
Query 1064 TTGCTGTTGACCTGACCATGGAACTTTACCAGCACCTGGAATCTAAGGAGTGGTTTGTGCAGCTCTATTACCAC 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1870 TTGCTGTTGACCTGACCATGGAACTTTACCAGCACCTGGAATCTAAGGAGTGGTTTGTGCAGCTCTATTACCAC 1943
Query 1138 GGAA---------------------------------------------------------------------- 1141
||.|
Sbjct 1944 GGGAAGGTAATACCCCTGAGGTGGGGTTGGGTGGTGGTGAGGCACCCTCCTGCAAAACCCACCTACCTGAGTTA 2017
Query 1142 -------------------------------------------------------------------------- 1141
Sbjct 2018 GCACCAAGTCTCCCTCCTCAGGCCCAGTGGAGTCTCTCTTGGCACAGTCAGCTCTCTGAATCCTATAGGGCAAC 2091
Query 1142 -------------------------------------------------------------------------- 1141
Sbjct 2092 TCCTGGCTATGGCCCAGGGGTCAGGCAGAACTTGACAGATGGTGGCAGGATGGGGCTTGAGCCTTATCCCAGTT 2165
Query 1142 -------------------------------------------------------------------------- 1141
Sbjct 2166 CTGTTACAGACTCCTAGGAACAGGGTCCCCCTCCTCTTCTCCTGAGCGTCCCTGTCAGGATGTCGCCTCCTGGC 2239
Query 1142 -------------------------------------------------------------------------- 1141
Sbjct 2240 TGTGAGACCTGTTTTGGAGATTGTTGGTGGTATCTTTGGGAGGTGATGTGTGCTGCTGTTAGCACCCGTGGTGT 2313
Query 1142 -------------------------------------------------------------------------- 1141
Sbjct 2314 TGGCTGCTTCATCAGGGCTGGGGTCCAGGGCAGAGGCCAGAGCACGCCCCAGGGATGAGCCTGTTGGTTCTCCC 2387
Query 1142 -------------------------------------------------------------------------- 1141
Sbjct 2388 AGCTCGGGGATGTAACTCGACTCTTTCTTCCCAGTCAATTCAACACTTTTTGAGTGACTTTTACAAGCAGAGCA 2461
Query 1142 -------------------------------------------------------------------------- 1141
Sbjct 2462 TAGTGCTTTTATTCTGGAAGCTCACCGGGTAGTGGGGCCTTCCTGTCTGTAATATGTATGCACATGTATACCAC 2535
Query 1142 -------------------------------------------------------------------------- 1141
Sbjct 2536 ATGGATCAGAGCCTCTCAGATCTCTGGGCTTAGCTGGAAATAGCAGAAGGACAGGTTCCTCGGCGGACCTGCTG 2609
Query 1142 -----------------AGGAGCAGGTGCCGAGAGGTTGCCCTGATGGGCTCTGCCCGCTGGACATGTTCTTGA 1198
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2610 AGTTATGTTTCTTCTGCAGGAGCAGGTGCCGAGAGGTTGCCCTGATGGGCTCTGCCCGCTGGACATGTTCTTGA 2683
Query 1199 ATGCCATGTCAGTTTATACCTTAAGCCCAGAAAAATACCACGCACTCTGCTCTCAAACTCAGGTGATGGAAGTT 1272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2684 ATGCCATGTCAGTTTATACCTTAAGCCCAGAAAAATACCACGCACTCTGCTCTCAAACTCAGGTGATGGAAGTT 2757
Query 1273 GGAAATGAAGAG---------------------------------------------------------- 1284
||||||||||||
Sbjct 2758 GGAAATGAAGAGTAACTGATTTATAAAAGCAGGATGTGTTGATTTTAAAATAAAGTGCCTTTATACAATG 2827
