Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08339
- Subject:
- NR_046394.2
- Aligned Length:
- 2937
- Identities:
- 606
- Gaps:
- 2330
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCCTTCCGACAGGGCCGCGGACGCCCGGGCAGCCACGGCGGCGGGGCCGCGGCGGGCGCCGGCTCAGCCCGCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTTTCTCCCGCCGCCTCCCCGCCCCGCCCCGCGCCGCGCCGGCCGCTGTCAGCTCCCTCAGCGTCCGGCCGAGG 148
Query 1 --------ATGCTGAGCCGCTGCCGCAGCCGGCTGCTCCACGTCCTGGGCCTTAGCTTCCTGCTGCAGACCCGC 66
|||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CGCGGTGTATGCTGAGCCGCTGCCGCAGCGGGCTGCTCCACGTCCTGGGCCTTAGCTTCCTGCTGCAGACCCGC 222
Query 67 CGGCCGATTCTCCTCTGCTCTCCACGTCTCATGAAGCCGCTGGTCGTGTTCGTCCTCGGCGGCCCCGGCGCCGG 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CGGCCGATTCTCCTCTGCTCTCCACGTCTCATGAAGCCGCTGGTCGTGTTCGTCCTCGGCGGCCCCGGCGCCGG 296
Query 141 CAAGGGGACCCAGTGCGCCCGCATCGTCGAGAAATATGGCTACACACACCTTTCTGCAGGAGAGCTGCTTCGTG 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CAAGGGGACCCAGTGCGCCCGCATCGTCGAGAAATATGGCTACACACACCTTTCTGCAGGAGAGCTGCTTCGTG 370
Query 215 ATGAAAGGAAGAACCCAGATTCACAGTATGGTGAACTTATTGAAAAGTACATTAAAGAAGGAAAGATTGTACCA 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATGAAAGGAAGAACCCAGATTCACAGTATGGTGAACTTATTGAAAAGTACATTAAAGAAGGAAAGATTGTACCA 444
Query 289 GTTGAGATAACCATCAGTTTATTAAAGAGGGAAATGGATCAGACAATGGCTGCCAATGCTCAGAAGAATAAATT 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTTGAGATAACCATCAGTTTATTAAAGAGGGAAATGGATCAGACAATGGCTGCCAATGCTCAGAAGAATAAATT 518
Query 363 CTTGATTGATGGGTTTCCAAGAAATCAAGACAACCTTCAAGGATGGAACAAGACCATGGATGGGAAGGCAGATG 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTTGATTGATGGGTTTCCAAGAAATCAAGACAACCTTCAAGGATGGAACAAGACCATGGATGGGAAGGCAGATG 592
Query 437 TATCTTTCGTTCTCTTTTTTGACTGTAATAATGAGATTTGTATTGAACGATGTCTTGAGAGGGGAAAGAGTAGT 510
||||||||||||||||||||||||||||||||
Sbjct 593 TATCTTTCGTTCTCTTTTTTGACTGTAATAAT------------------------------------------ 624
Query 511 GGTAGGAGTGATGACAACAGAGAGAGCTTGGAAAAGAGAATTCAGACCTACCTTCAGTCAACAAAGCCAATTAT 584
|||||||||||||||||||||||||||||||||||||||
Sbjct 625 -----------------------------------GAGAATTCAGACCTACCTTCAGTCAACAAAGCCAATTAT 663
Query 585 TGACTTATATGAAGAAATGGGGAAAGTCAAGAAAATAGATGCTTCTAAATCTGTTGATGAAGTTTTTGATGAAG 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 664 TGACTTATATGAAGAAATGGGGAAAGTCAAGAAAATAGATGCTTCTAAATCTGTTGATGAAGTTTTTGATGAAG 737
Query 659 TTGTGCAGATTTTTGACAAGGAAGGC------------------------------------------------ 684
||||||||||||||||||||||||||
Sbjct 738 TTGTGCAGATTTTTGACAAGGAAGGCTAATTCTAAACCTGAAGGCATCCTTGAAATCATGCTTGAATATTGCTT 811
Query 685 -------------------------------------------------------------------------- 684
Sbjct 812 TGATAGCTGCTATCATGACCCCTTTTTAAGGCAATTCTAATCTTTCATAACTACATCTCAATTAGTGGCTGGAA 885
Query 685 -------------------------------------------------------------------------- 684
Sbjct 886 AGTACATGGTAAAACAAAGTAAATTTTTTTATGTTCTTTTTTTTGGTCACAGGAGTAGACAGTGAATTCAGGTT 959
Query 685 -------------------------------------------------------------------------- 684
Sbjct 960 TAACTTCACCTTAGTTATGGTGCTCACCAAACGAAGGGTATCAGCTATTTTTTTTAAAATTCAAAAAGAATATC 1033
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1034 CCTTTTATAGTTTGTGCCTTCTGTGAGCAAAACTTTTTAGTACGCGTATATATCCCTCTAGTAATCACAACATT 1107
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1108 TTAGGATTTAGGGATACCCGCTTCCTCTTTTTCTTGCAAGTTTTAAATTTCCAACCTTAAGTGAATTTGTGGAC 1181
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1182 CAAATTTCAAAGGAACTTTTTGTGTAGTCAGTTCTTGCACAATGTGTTTGGTAAACAAACTCAAAATGGATTCT 1255
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1256 TAGGAGCATTTTAGTGTTTATTAAATAACTGACCATTTGCTGTAGAAAGATGAGAAAACTTAAGCTTTGTTTTA 1329
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1330 CTACAACTTGTACAAAGTTGTATGACAGGGCATATTCTTTGCTTCCAAGATTTGGGTTGGGGGCACTAGGGGTT 1403
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1404 CAGAGCCTGGCAGAATTGTCAGCTTTAGTCTGACATAATCTAAGGGTATGGGGCAAGGATCACATCTAATGCTT 1477
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1478 GTGTTCCTTATACTCTATTATATAGTGTTATTCATGATTCAGCTGATCTTAACAAAATTCGTAGCAGTGGAACC 1551
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1552 TTGAAATGCATGTGGCTAGATTTATGCTAAAATGATTCTCAGTTAGCATTTTAGTAACACTTCAAAGGTTTTTT 1625
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1626 TTTGTTTGTTTTCTAGACTTAATAAAAGCTTAGGATTAATTAGAAGAAGCAATCTAGTTAAATTTCCCATTTGT 1699
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1700 ATTTTATTTTCTTGAATACTTTTTTCATAGTTATTTGTTTAAAAAGATTTAAAAATCATTGCACTTTGGTCAGA 1773
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1774 AAAATAATAAATATATCTTATAAATGTTTGATTCCCTTCCTTGCTATTTTTATTCAGTAGATTTTTGTTTGGCA 1847
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1848 TCATGTTGAAGCACCGAAAGATAAATGATTTTTAAAAGGCTATAGAGTCCAAAGGAATATTCTTTTACACCAAT 1921
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1922 TCTTCCTTTAAAAATCTCTGAGGAATTTGTTTTCGCCTTACTTTTTTTTCTTCTGTCACAATGCTAAGTGGTAT 1995
Query 685 -------------------------------------------------------------------------- 684
Sbjct 1996 CCGAGGTTCTTAATATGAGATTTAAAATCTTAAAATGTTTCTTATTTTCAGCACTTACATCATTTGGTACACAG 2069
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2070 GGTCAAATAGGGCAAATAATTTTGTCTTTGTATAATAGATTTGATATTTAAAGTCACTGGAAATAGGACAAGTT 2143
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2144 AATGGATGTTTTTATATTTTAATAGAATCATTTATTTCTATGTGTTATGAAATTCACTTAATGATAAATTTTTC 2217
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2218 AACATACTTGCCATTAGAAAACAAAGTATTGCTAAGTACTATAACATATTGGCCACTAAAATTCATATTGAGAT 2291
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2292 TATCTTGGTTTCTTGGAAGAGATAGGAATGAGTTCTTATCTAGTGTTGCAGGCCAGCAAATACAGAGGTGGTTT 2365
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2366 AATCAAACAGCTCTAGTATGAAGCAAGAGTAAAGACTAAGGTTTCGAGAGCATTCCTACTCACATAAGTGAAGA 2439
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2440 AATCTGTCAGATAGGAATCTAAATATTTATAGTGAGATTGTGAAAGCAACCTTAAAGTTTTGAAGAAGACTGAT 2513
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2514 GAGACTAGGTGCTTTGCTTCCTTTCATCAGGTATCTTTCTGTGGCATTTGAGAACAGAAACCAAGAAACATGGT 2587
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2588 AATTACTAAATTATGAGGCTTTGCTTTTTGTTTGCTTTTAAGTAGAAAAACATGTTGGCAACATTGAGTTTTGG 2661
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2662 AGTTGATTGAGATAATATGACTTAACTAGTTTTGTCATTCCATTTGTTAAAGATACAGTCACCAAGAATGTTTT 2735
Query 685 -------------------------------------------------------------------------- 684
Sbjct 2736 GAGTTTTTTGAAAGACCCCAATTTAAGCCTTGCTTATTTTTAAATTATTTCCATTCAGTGATGTTGGATGTATA 2809
Query 685 --------------------------------------------------- 684
Sbjct 2810 TCAGTTATTTAGTAAATAATCTCAATAAATTTTGTGCTGTGGCCTTTGCTA 2860
