Nucleotide Global Alignment

Description

• Query: ccsbBroad304_08344
• Subject: XM_017014807.1
• Aligned Length: 1471
• Identities: 717
• Gaps: 710

Alignment

Query    1  ATGAACATGCCCCAGTCCCTGGGCAACCAGCCACTGCCCCCAGAACCGCCATCCCTTGGAACCCCTGCGGAGGG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GCCTGGGACCACGTCCCCACCCGAGCACTGCTGGCCAGTGCGCCCGACTCTGCGCAACGAGCTGGACACCTTCT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CTGTCCACTTCTACATCTTCTTTGGCCCAAGTGTGGCCCTTCCCCCTGAGCGCCCAGCCGTGTTCGCCATGAGG  222
                                                                                ||||  
Sbjct    1  --------------------------------------------------------------------ATGA--  4

Query  223  CTGTTGCCAGTGCTGGACAGTGGAGGCGTCCTCAGCCTGG-AGCTCCAG-----CTCAATGC--------GAGC  282
                       .|||||    |||||      ||.|.||| |||.||||     |   ||||        ||||
Sbjct    5  -----------TCTGGA----GGAGG------CAACTTGGCAGCCCCAGGAGGAC---ATGCTGGGTCCAGAGC  54

Query  283  TCCGTGCGCCAGGAAAACGTGACGGTGTTTGGATGCTTGACTCACGAGGTGCCCTTGAGCCTGGGGGATGCAGC  356
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   55  TCCGTGCGCCAGGAAAACGTGACGGTGTTTGGATGCTTGACTCACGAGGTGCCCTTGAGCCTGGGGGATGCAGC  128

Query  357  AGTGACCTGTTCCAAAGAGTCCCTGGCCGGCTTCCTCCTCTCTGTCAGTGCCACCACCAGGGTTGCCAGGCTGC  430
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  129  AGTGACCTGTTCCAAAGAGTCCCTGGCCGGCTTCCTCCTCTCTGTCAGTGCCACCACCAGGGTTGCCAGGCTGC  202

Query  431  GAATCCCATTCCCGCAGACGGGGACCTGGTTCCTGGCCCTCCGCTCCCTGTGCGGGGTGGGGCCTCGGTTCGTG  504
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  203  GAATCCCATTCCCGCAGACGGGGACCTGGTTCCTGGCCCTCCGCTCCCTGTGCGGGGTGGGGCCTCGGTTCGTG  276

Query  505  CGGTGCCGCAACGCGACGGCCGAGGTGTGGATGCGCACCTTCCTGTCCCCATGCGTGGACGACTGCGGGCCCTA  578
            |||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  277  CGGTGCCGCAACGCGACGGCCGAGGTGCGGATGCGCACCTTCCTGTCCCCATGCGTGGACGACTGCGGGCCCTA  350

Query  579  CGGCCAGTGCAAGCTGCTGCGCACACACAATTATCTGTACGCAGCCTGCGAGTGCAAGGCCGGGTGGAGAGGCT  652
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  351  CGGCCAGTGCAAGCTGCTGCGCACACACAATTATCTGTACGCAGCCTGCGAGTGCAAGGCCGGGTGGAGAGGCT  424

Query  653  GGGGCTGCACCGACAGTGCAGATGCGCTCACCTATGGATTCCAGCTGCTGTCCACACTCCTGCTCTGCCTGAGC  726
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  425  GGGGCTGCACCGACAGTGCAGATGCGCTCACCTATGGATTCCAGCTGCTGTCCACACTCCTGCTCTGCCTGAGC  498

Query  727  AACCTCATGTTTCTGCCACCTGTGGTCCTGGCCATTCGGAGTCGATATGTGCTGGAAGCTGCAGTCTACACCTT  800
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  499  AACCTCATGTTTCTGCCACCTGTGGTCCTGGCCATTCGGAGTCGATATGTGCTGGAAGCTGCAGTCTACACCTT  572

Query  801  CACCATGTTCTTCTCCACGGT-----ATGC------------------GGTGG-TGTCTGCATCTT--ATCACT  848
            |||||||||||||||||||.|     ||||                  .|||| |.||||||||.|  |..||.
Sbjct  573  CACCATGTTCTTCTCCACGTTCTATCATGCCTGTGACCAGCCAGGCATCGTGGTTTTCTGCATCATGGACTACG  646

Query  849  GGGTGCT-------TGTG----CATGG---------TG-----GTGGGTCACAGTCTGTATTTCCA--CCACGT  895
            ..|||||       ||||    |.|||         ||     |||||||||.|||   |||.|||  .|.|||
Sbjct  647  ATGTGCTGCAGTTCTGTGATTTCCTGGGCTCCTTAATGTCCGTGTGGGTCACTGTC---ATTGCCATGGCTCGT  717

Query  896  TCT-----CCGAG--------GGT----------TTGGGA---------------ATGTCTGTGC--CTT----  925
            | |     |||.|        |||          .|||||               |||.||.|||  |||    
Sbjct  718  T-TACAGCCCGTGGTCAAGCAGGTGCTGTATTTGCTGGGAGCTATGCTGCTGTCCATGGCTCTGCAGCTTGACC  790

Query  926  --------------------------CACTGTGTCTT-----------------CTACAGACAGAGACAGCAG-  955
                                      |.|.||.||||                 |.||||.|.|..|| |||| 
Sbjct  791  GACATGGACTCTGGAACCTGCTTGGACCCAGTCTCTTCGCCCTGGGGATCTTGGCCACAGCCTGGTAC-GCAGC  863

Query  956  ---------------TGCTTCCCA--------------------------------AACTGTCA-------TGC  975
                           ||||.||||                                ..|||.||       |||
Sbjct  864  GTCCGCCGCCGGCACTGCTACCCACCCACGTGGCGCCGCTGGCTTTTCTACTTGTGCCCTGGCAGCCTTATTGC  937

Query  976  ATAGATAATG--GTCAT---------TTTTGT-AAGACACATTGGAGTAAA-----------------------  1014
              ||..|.||  |||.|         |||||| .||||.|    |.|..||                       
Sbjct  938  --AGGCAGTGCCGTCCTGCTTTATGCTTTTGTGGAGACCC----GGGACAACTACTTCTACATTCACAGCATTT  1005

Query 1015  --------------------------------------------------------------------------  1014
                                                                                      
Sbjct 1006  GGCATATGCTCATTGCGGGCAGTGTGGGCTTCCTGCTGCCCCCTCGTGCCAAGACTGACCACGGGGTCCCATCT  1079

Query 1015  --------------------------------------------------------------------------  1014
                                                                                      
Sbjct 1080  GGAGCCCGGGCCCGGGGCTGTGGTTACCAGCTATGCATCAACGAGCAGGAGGAGCTGGGCCTCGTGGGCCCAGG  1153

Query 1015  -----------------------------------------------------------------  1014
                                                                             
Sbjct 1154  AGGGGCCACTGTCAGCAGCATCTGTGCCAGCTGAGAGGGGCTTTGGGCCTGGCCCTGAGGGGATA  1218