Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08349
- Subject:
- NR_144414.2
- Aligned Length:
- 2158
- Identities:
- 945
- Gaps:
- 1212
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTCCTTCAGCGGCCGGGTTCGCGCCGCGGTCGCCGGCTGCTTACGTGGGCGGGCCTAGTGTGGGGCTGAGGGT 74
Query 1 ----------ATGGCGGTGGACATCACGCTGCTATTCCGGGCCAGCGTCAAGACCGTGAAGACGCGGAACAAGG 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCGGGTCGCTATGGCGGTGGACATCACGCTGCTATTCCGGGCCAGCGTCAAGACCGTGAAGACGCGGAACAAGG 148
Query 65 CGCTGGGAGTGGCGGTGGGCGGCGGGGTCGATGGCAGCCGGGACGAGCTGTTCCGCCGGAGCCCCCGGCCCAAG 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CGCTGGGAGTGGCGGTGGGCGGCGGGGTCGATGGCAGCCGGGACGAGCTGTTCCGCCGGAGCCCCCGGCCCAAG 222
Query 139 GGCGACTTCTCCAGCCGGGCCCGCGAAGTGATTTCTCACATTGGCAAACTGAGAGATTTTCTTCTGGAACACAG 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGCGACTTCTCCAGCCGGGCCCGCGAAGTGATTTCTCACATTGGCAAACTGAGAGATTTTCTTCTGGAACACAG 296
Query 213 GAAAGATTATATTAATGCTTATAGCCATACCATGTCTGAATATGGGAGGATGACAGACACAGAACGAGACCAGA 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GAAAGATTATATTAATGCTTATAGCCATACCATGTCTGAATATGGGAGGATGACAGACACAGAACGAGACCAGA 370
Query 287 TAGACCAGGATGCCCAGATATTCATGAGGACCTGTTCAGAAGCAATTCAGCAACTACGAACAGAAGCTCACAAG 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TAGACCAGGATGCCCAGATATTCATGAGGACCTGTTCAGAAGCAATTCAGCAACTACGAACAGAAGCTCACAAG 444
Query 361 GAGATACATTCCCAGCAAGTGAAGGAGCACAGGACCGCTGTTTTGGATTTCATTGAAGATTACTTGAAAAGAGT 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAGATACATTCCCAGCAAGTGAAGGAGCACAGGACCGCTGTTTTGGATTTCATTGAAGATTACTTGAAAAGAGT 518
Query 435 ATGTAAACTTTACTCAGAACAGAGAGCCATCCGAGTTAAAAGAGTGGTGGATAAGAAAAGATTATCTAAGTTGG 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct 519 ATGTAAACTTTACTCAGAACAGAGAGCCATCCGAGTTAAAAGAGTGGTGGATAAGAAAAGATTATCTAAGCTGG 592
Query 509 AACCAGAACCAAATACAAAGACAAGAGAATCCACATCTTCTGAGAAAGTTTCACAGAGTCCTTCAAAAGACTCT 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AACCAGAACCAAATACAAAGACAAGAGAATCCACATCTTCTGAGAAAGTTTCACAGAGTCCTTCAAAAGACTCT 666
Query 583 GAAGAAAACCCTGCCACTGAAGAACGTCCAGAAAAAATTTTGGCTGAAACACAACCTGAATTGGGAACGTGGGG 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAAGAAAACCCTGCCACTGAAGAACGTCCAGAAAAAATTTTGGCTGAAACACAACCTGAATTGGGAACGTGGGG 740
Query 657 AGATGGCAAAGGCGAAGATGAGTTATCCCCAGAAGAAATACAAATGTTTGAACAGGAAAATCAGCGACTAATTG 730
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGATGGCAAAGGCGAAGATGAGTTATCCCCAGAAGAAATACAAAT----------------------------- 785
Query 731 GTGAAATGAACAGCTTGTTTGATGAAGTGAGGCAAATCGAAGGGAGAGTGGTTGAGATTTCCAGACTCCAAGAG 804
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 786 ------------------------------GGCAAATCGAAGGGAGAGTGGTTGAGATTTCCAGACTCCAAGAG 829
Query 805 ATATTCACGGAAAAGGTTTTGCAACAGGAAGCTGAGATTGACAGCATTCACCAGTTAGTTGTGGGGGCAACTGA 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 830 ATATTCACGGAAAAGGTTTTGCAACAGGAAGCTGAGATTGACAGCATTCACCAGTTAGTTGTGGGGGCAACTGA 903
Query 879 AAATATCAAGGAAGGCAACGAAGACATAAGAGAGGCCATTAAAAACAACGCTGGCTTCCGCGTGTGGATCCTCT 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 904 AAATATCAAGGAAGGCAACGAAGACATAAGAGAGGCCATTAAAAACAACGCTGGCTTCCGCGTGTGGATCCTCT 977
Query 953 TCTTCCTCGTGATGTGCTCCTTCTCCTTGCTCTTCCTCGACTGGTACGACAGC--------------------- 1005
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 978 TCTTCCTCGTGATGTGCTCCTTCTCCTTGCTCTTCCTCGACTGGTACGACAGCTAGCCAGGGCCACGGGGGCCC 1051
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1052 AGCACGAGAGTCCTCATGGGCACTCACAGACTGCGTGCTTTCATGTACTTCCAGTGCTGGAGCATGGTATGACC 1125
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1126 AGATTTTATCACAGTGCCATTTGAAGGGAAAGGAGTTCAGACAGACAGACGTATTCCCCAAAAAGGGATACCCC 1199
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1200 AGGCCGATGGTGTTCAGCCATTTAGCAGCTGAAAAAGGAAACAGTGCACACCAATGGGAGGCAGCCTGCGTAGC 1273
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1274 CCTCATCAGGCAAGACAGACTGAATGCAGGAGTGGGTGATTAGCTGCTCCTTGAACTTGAGGCTGCCTTGGCAG 1347
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1348 CAGGGGCACAGCAGGCCTCAAGAGCCCCTAATTGTCTCAGGGTTCAAAGGAAGACACTGACCTTTCCCATCCCG 1421
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1422 GTAGCTTCAGGGAAGATCATAGTTAATAACGTCTCTCAACAAATGATTACTTCTTTGTTTCCTTGTGGCTTCTT 1495
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1496 GTCTGTCTGAGTCAACGAATACACAGACTTACTGGATTATAGAAGAGAAAATTCACATCTGCCTTGTTAATCTA 1569
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1570 ATAAATATAATTACAGCCCCTTAATGTGTTGTCAATGAGTCTAAGTTGACAAATTCAGTGGCAGCCCAGCCACC 1643
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1644 TCCTATCAATCAATCAGGGAAGAAATGCAGGGGAGACTGGGGCCCTCAGTGAGGGGCTGCCTGGCATTACTCCT 1717
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1718 CCAAAGACTGCTGCCCCCAGAACAGGCAGGGGGTGTGGGAGGGCCAGTTTCCCGCCACTGGGTCCAAGGAGCCT 1791
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1792 TTGTTCAAAGGAAGAAGTGGGCCACGGAAGAACGGGCCTGCTTCTCTCGTGCCTGTGCTTCTGACCTCCAGGAA 1865
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1866 CTGTAAACAGGAACACCTATGTGTAACTGAAGGCATGAGACATCTGTACAGGAAGCATCCCAGCGCCCACATGG 1939
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1940 GCATGAGACAGTCTGCACTGCGCCTGGTGAAATGCGTGTGTGTACAGACAGTCCACTGGGCAGCACAGGTATCC 2013
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2014 TCATGTTCTTTATTTGCACAGAGTGAAATGTCAGAAGTTACATGTAAATGAATTCACAGTCAATAAAGTCCACG 2087
Query 1006 ------------ 1005
Sbjct 2088 TCTACCTGGAAA 2099
