Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08382
- Subject:
- XR_001747910.2
- Aligned Length:
- 4949
- Identities:
- 821
- Gaps:
- 4127
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGCTGACTGTGGCGGCGGCGGCCTCGAGGTGACAACTGTCTCCGTCGCAGGCTCCGGCGGGGGCGCAGGAGGTC 74
Query 1 ---------------------------------------------------ATGGCGACCACCGTCAGCACTCA 23
|||||||||||||||||||||||
Sbjct 75 GCCCGGCGCGTCACTGTCGGGTCGGCGAGCCACGGGGGCCGCCGCAGCACCATGGCGACCACCGTCAGCACTCA 148
Query 24 GCGCGGGCCGGTGTACATCGGTGAGCTCCCGCAGGACTTCCTCCGCATCACGCCCACACAGCAGCAGCGGCAGG 97
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCGCGGGCCGGTGTACATCGGTGAGCTCCCGCAGGACTTCCTCCGCATCACGCCCACACAGCAGCAGCGGCAGG 222
Query 98 TCCAGCTGGACGCCCAGGCGGCCCAGCAGCTGCAGTACGGAGGCGCAGTGGGCACCGTGGGCCGACTGAACATC 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TCCAGCTGGACGCCCAGGCGGCCCAGCAGCTGCAGTACGGAGGCGCAGTGGGCACCGTGGGCCGACTGAACATC 296
Query 172 ACGGTGGTACAGGCAAAGTTGGCCAAGAATTACGGCATGACCCGCATGGACCCCTACTGCCGACTGCGCCTGGG 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ACGGTGGTACAGGCAAAGTTGGCCAAGAATTACGGCATGACCCGCATGGACCCCTACTGCCGACTGCGCCTGGG 370
Query 246 CTACGCGGTGTACGAGACGCCCACGGCACACAATGGCGCCAAGAATCCCCGCTGGAATAAGGTCATCCACTGCA 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CTACGCGGTGTACGAGACGCCCACGGCACACAATGGCGCCAAGAATCCCCGCTGGAATAAGGTCATCCACTGCA 444
Query 320 CGGTGCCCCCAGGCGTGGACTCTTTCTATCTCGAGATCTTCGATG----------------------------- 364
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CGGTGCCCCCAGGCGTGGACTCTTTCTATCTCGAGATCTTCGATGAGGTGAGAGGGACGTGCCAGCTATTATGG 518
Query 365 -------------------------------------------------------------------------- 364
Sbjct 519 AGGCTGCACGTGGCTGAGCGTGGCTGCCGTGGGGACACACCTGCCAACACAGCCACGTTCCTGGCTGGCTTCGA 592
Query 365 -------------------------------------------------------------------------- 364
Sbjct 593 GGCGTGGCTCCCCACCTGGTGTTTCATTGGGTGCATGACAGGGTCCTGCTCTCCCCAAGGAATGTGAAAAAGGG 666
Query 365 -------------------------------------------------------------------------- 364
Sbjct 667 ATTGTTTCCAGCTCCTTGAACATACTTACATTTGGAAACATCCCCAGTGACAAGCATGACCCAGGGATACAGCG 740
Query 365 -------------------------------------------------------------------------- 364
Sbjct 741 TGCACGTGTCCCCTCCGCTGGGCGCACAGGGTCTGGCCGCTCACCAGCAGGTGGGATTTCCAGGGACAGAGCGT 814
Query 365 -------------------------------------------------------------------------- 364
Sbjct 815 GCACGTGTCCCCTCCGCTGGGCACTGATCTGGCCGCTCACCAGCAGGTGGGATTTCCAGGGACAGAGCATGCAT 888
Query 365 -------------------------------------------------------------------------- 364
Sbjct 889 GTGTCCCCCGCCACTGGGCACTCGTCTGGCCGCTCACCAGCAGGTGGGATTTCCAGGGACAGAGCATGCATGTG 962
Query 365 -------------------------------------------------------------------------- 364
Sbjct 963 TCCGCCCCGCTGGGCGCACAGGGTCTTGCCGCACACCAGCAGGTGGGATTTCCAGGGACAGAGTGTGCACGTGT 1036
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1037 CCACTGGGCACTCGTCTGGCCGCTCACCAGCAGGTGGGATTTCCAGGGACAGAGCGTGCATGTGTCCGCCCCGC 1110
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1111 TGGGCGCACAGGGTCCGGCCGCTCACCAGCAGGTGGGATTTCCAGAGAGTGCGGCTGCCTACTGGGTGGGAAAG 1184
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1185 CTGTTCTTGGTGGTGCGAATGGTCGTGACCCTTGAGGGTCCTGAGTCCCGTCCGTGGCTGCACCTGCAGCGCTT 1258
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1259 CTGAGGCAGAGTCAGAAGGTCAGAGGGGATGTGGCGAGGCTGCTGCTCAGTGTGGTCCTGGCACCTCGCACCTG 1332
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1333 TGGCATTGTGAGGCTAGAGACTGGGTGGGGGCCGGGGAGCAGTGTGGGGCAGCCAGGCCAGCAGACGGCCAGCC 1406
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1407 CTCCCTGCCTGGGCCCTGCCTTTTCCTCCCGGCTTTTCTCTCCCCGTCCCTACCTGCTTTCCCCTCCCTGGCCC 1480
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1481 TCAGAAGAGTAGAGAGCGCATGGGAAGTGCAGAGTCAGCTGTGGGAGGCAGACCCCGTGTCCTTTCCAGTCTGC 1554
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1555 ACCCCGGCTGCTCTGGGGCTTGACAGGTGGCAGCCGGTGGAGCAAGGATGGGGCCCCGAGGGCTGGGGAGGAGC 1628
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1629 AGCCAGTGTCCCTGAAGTGGAACTGAAGGAGGACAGCAGCCCAGGGCCCTCGCTTTCCCCAGCCCCAGACCTGG 1702
Query 365 -------------------------------------------------------------------------- 364
Sbjct 1703 CCCTGGCCCTGGCCCTGGCCCATCCTGGTGGAGAGAGGGAAGAAGTCCCCTACGGAGGCTGATATACGATCGTG 1776
Query 365 --------------------------------------------AGAGAGCCTTCTCCATGGACGACCGCATTG 394
||||||||||||||||||||||||||||||
Sbjct 1777 AAGCCTGCGCTGCCCGAGGGGTCTCATCGATGGGGTGTTGGTGCAGAGAGCCTTCTCCATGGACGACCGCATTG 1850
Query 395 CCTGGACCCACATCACCATCCCAGAGTCCCTGAGGCAGGGCAAGGTGGAGGACAAGTGGTACAGCCTGAGCGGG 468
||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CCTGGACCCACATCACCATCCCGGAGTCCCTGAGGCAGGGCAAGGTGGAGGACAAGTGGTACAGCCTGAGCGGG 1924
Query 469 AGGCAGGGGGACGACAAGGAGGGCATGATCAACCTCGTCATGTCCTACGCGCTGCTTCCAGCTGCCATGGTGAT 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 AGGCAGGGGGACGACAAGGAGGGCATGATCAACCTCGTCATGTCCTACGCGCTGCTTCCAGCTGCCATGGTGAT 1998
Query 543 GCCACCCCAGCCCGTGGTCCTGATGCCAACAGTGTACCAGCAGGGCGTTGGCTATGTGCCCATCACAGGGATGC 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GCCACCCCAGCCCGTGGTCCTGATGCCAACAGTGTACCAGCAGGGCGTTGGCTATGTGCCCATCACAGGGATGC 2072
Query 617 CCGCTGTCTGTAGCCCCGGCATGGTGCCCGTGGCCCTGCCCCCGGCCGCCGTGAACGCCCAGCCCCGCTGTAGC 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 CCGCTGTCTGTAGCCCCGGCATGGTGCCCGTGGCCCTGCCCCCGGCCGCCGTGAACGCCCAGCCCCGCTGTAGC 2146
Query 691 GAGGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAACATGGACCAGGAGGTGATCCGCTCCGTGCTGGAAGC 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 GAGGAGGACCTGAAAGCCATCCAGGACATGTTCCCCAACATGGACCAGGAGGTGATCCGCTCCGTGCTGGAAGC 2220
Query 765 CCAGCGAGGGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGATGGGGGAGGAGCCA---------------- 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 CCAGCGAGGGAACAAGGATGCCGCCATCAACTCCCTGCTGCAGATGGGGGAGGAGCCATAGAGCCTCTGCCTCG 2294
Query 823 -------------------------------------------------------------------------- 822
Sbjct 2295 ATGCCGTTTTGCCCCCGCTCTTTGGACACGCCGACCCGGCGCTCCCCAAGGAATGCTGTCCCAACAAGATTCCC 2368
Query 823 -------------------------------------------------------------------------- 822
Sbjct 2369 GTGAAAGAGCACCCGTGTCGCCCCCTCCCGTGGACTTCTGTGCCGCCCCGTCCACACCTGTTCTTGGGTGCATG 2442
Query 823 -------------------------------------------------------------------------- 822
Sbjct 2443 TGGGTTTTCGGTTCCTGGCGGTCCAGGACGGGGCGGGGGCTCCCCTCCCATCTCGTGCTGGGAGGTCTCAGCGC 2516
Query 823 -------------------------------------------------------------------------- 822
Sbjct 2517 GCTCTCCTGTCCCTGGGACGTGCGTCTCTCCTTCTCATGCCGTTCTGGAAAATGCTCTTGCTGTAGAGAGCAGC 2590
Query 823 -------------------------------------------------------------------------- 822
Sbjct 2591 TGCTTCTGCCAGGGTGTTGGAGGTGGTGGAGCGCCTTCCGATTCCATTCATGGCATTTTGTGATGTGATGTAAT 2664
Query 823 -------------------------------------------------------------------------- 822
Sbjct 2665 TGGAATAGAGCTGTTGATTTAAGGCACACACAATCCCTCACACTGTGGGTTTTTTTTAGAACTTCCCAGACGAA 2738
Query 823 -------------------------------------------------------------------------- 822
Sbjct 2739 AACTCACGCCCTTGCCCTAACGCGCTTTGCTGTGAGCCTGGCCCCTGCCCAGGGCTTGGGTCTGGTGAGCTGAG 2812
Query 823 -------------------------------------------------------------------------- 822
Sbjct 2813 CAGCTTCCTGTGGATGGTGTGGGGCCGGCCTCTGGCCTGGCTCACCTGGCCACTGTCCAGCCAGCCTTGTGACA 2886
Query 823 -------------------------------------------------------------------------- 822
Sbjct 2887 GACTCCGGCCTGAAGGCAGAATGAACCCACACCTGGAGTGAGGAAGGGGGCCTGGCACGGTTGGCCAGGCTCTG 2960
Query 823 -------------------------------------------------------------------------- 822
Sbjct 2961 CCTGATTGCCAGCCAGCGGGCATCTGAAGCCGGGTCCTTCGCCCGCCGGAGGCTGCCGTCCGTCTCTCCTGCTG 3034
Query 823 -------------------------------------------------------------------------- 822
Sbjct 3035 CGCTCGTGCCAGCTCCGTGGGTGTCCTCCCAGGGAGCTTCTCTTCTCAACAGGCCTTGCGAGGCTGGGGTGAGA 3108
Query 823 -------------------------------------------------------------------------- 822
Sbjct 3109 GGTGATAGAGGCAGCACTGTGCATGATTCCGAGAGGGTGTGGTGGCACTGCCAGCCGACTGCTGACAGCTTGGG 3182
Query 823 -------------------------------------------------------------------------- 822
Sbjct 3183 AGCTGCTGTGCCCAGGACGTGGGTTCAGCGTGGGCGAGGAAAGCCTGGCGAGCGTGGCCCTGTAAAAGCTTTCT 3256
Query 823 -------------------------------------------------------------------------- 822
Sbjct 3257 GAGGCGGGAGGCGCTCACTTACCTCTGACTGCCTGGGCGCTGCGTGTAGCATCTTGGCCTACAGGACAGATTTT 3330
Query 823 -------------------------------------------------------------------------- 822
Sbjct 3331 AGGTGACACCTGGTTATGACAGTCAGAAATTTGAGAAGCTTCTCACAAGTGATGCACTTTAAATAATCTGCATG 3404
Query 823 -------------------------------------------------------------------------- 822
Sbjct 3405 CCATTGAGACACCTGCATGTCTGGTGTTTGTGGTTCAAGTGTCTTGCCGCCGGCCTTCGGATGTAAACCCACTG 3478
Query 823 -------------------------------------------------------------------------- 822
Sbjct 3479 ATAACGGACAGAAAGAGAATGCCCACAAGTGGGTCTTCTGTGGAAGATGCAGAAGGAGGAAGTTAGTGCTTACA 3552
Query 823 -------------------------------------------------------------------------- 822
Sbjct 3553 TTTTAGTCTTTTTCTCCCTCAAAAAAATAGGTTAAGTTTCAGTGCCAGCTAGAAAATACTGCTTTCTGCCATCG 3626
Query 823 -------------------------------------------------------------------------- 822
Sbjct 3627 ATTGGGGGTGGTTTTTGTCAAATATACTGTTGATAAATATTTATTTTTGTAAACTTGAAGTGTGTGGTGGCCGT 3700
Query 823 -------------------------------------------------------------------------- 822
Sbjct 3701 GGGGGAGGGACATGCTGGCAGCAGGCGCCTTCTTCAGCTGTGGGTCCTAAAGGCCTTTGATCCTTTGAAGAAGA 3774
Query 823 -------------------------------------------------------------------------- 822
Sbjct 3775 AAGACATGGTATTTGTTCAGCAGACGCCGACCACTCAGACGGAGGGGCCCCTGGGATTCCCTGTCTCAGATGGC 3848
Query 823 -------------------------------------------------------------------------- 822
Sbjct 3849 CTGGTCTTACGCCTGTGTAGATTTCTTCTCCATTGGGAATGAAGGTGTCAGGCGGGACTGGAACGTTCTAGATG 3922
Query 823 -------------------------------------------------------------------------- 822
Sbjct 3923 GTATGTTCCGTGATATTAACAACTCTAACCCAGGACAGACCACAAGCCACACTCAGAGGCCTCACTGTGCTGGG 3996
Query 823 -------------------------------------------------------------------------- 822
Sbjct 3997 GGCTTCGGTGTCCAGGCGCCCAGGTGTGGCCACCAGCACCGGTTTCTGCCTTCGCGTTGCTGGGGTGCAGTGAG 4070
Query 823 -------------------------------------------------------------------------- 822
Sbjct 4071 ACTGCCACACGCGTGCACATGTGGCTCTGTGGGTGTCTCCTAGAGAGGACGTGGCCCCTGCTGCCAGCCCTTGA 4144
Query 823 -------------------------------------------------------------------------- 822
Sbjct 4145 GCAGCCCGTGTGGGGGCCCGAGGGACCCACACAGTGGGGGCCAGCCTCGCTGGAGGGAGAGCAACCCTTTGCCG 4218
Query 823 -------------------------------------------------------------------------- 822
Sbjct 4219 ATGACCACGCTTGCCGCCATCTCTTAGTTTTCTTTTTCACAAGCGCTTTATTTTTTTAATAGACAAATCACATT 4292
Query 823 -------------------------------------------------------------------------- 822
Sbjct 4293 TTGCAAGGCCTTTAATTAAATAAGATTCTTCTTTCCTTCATTTTATGCTTTATTTCCTGTTTGAAGGCTTACTG 4366
Query 823 -------------------------------------------------------------------------- 822
Sbjct 4367 TAGAAGTGGCTTACTGTAGAAGCAGCTTGCTGAGCCCCTCCGAGCGGTCCCCAGAATTAGCTGGTTCACAACCC 4440
Query 823 -------------------------------------------------------------------------- 822
Sbjct 4441 CCACCCTCCCCCGCCCCCGCCTGTGTCAGGTGTGGATGAGGTCGTCACACTCAGAAGGACAGGCTTGTCTGCCA 4514
Query 823 -------------------------------------------------------------------------- 822
Sbjct 4515 GCTCACAAGGGGAGGCTGCAGTGGGTTTGGGAGCTGGGTTTAGGCCCCTGGTGTCTGAGGGCCCAGGCCTTGCC 4588
Query 823 -------------------------------------------------------------------------- 822
Sbjct 4589 AGCCTCTGCTGCTCCTGCTCCTGGGTTTGAAGATGCAGGCCGATCGCCAGCTCCGTGGCAGCGGTCACTAAGGA 4662
Query 823 -------------------------------------------------------------------------- 822
Sbjct 4663 CAGCCTGACTGTGCCATCTTGGAGCCTCAGGCGGGGCTCCGGAGATAGAAGACAGGTCGCCGGAGGCTCCCCCT 4736
Query 823 -------------------------------------------------------------------------- 822
Sbjct 4737 CCTCTCCTCTCCCCTCTGCAGATGCTCCCTGGGCGCTACCCTGCAGGGTGCCAGGCAGGAGTGGTCTCAGAACG 4810
Query 823 -------------------------------------------------------------------------- 822
Sbjct 4811 TGCGCTTCTGATTATTTTACTGGGGTCCATTGTCCAGATTTTTCTTTGATTGTAAAATATATTTTTACTTTTTA 4884
Query 823 ----------------------------------------------------------------- 822
Sbjct 4885 GTCTTCTAATTTAATAAATGATCCATATAAAAATAGAGAAATAAAGTCCTTTAAGGGAAGGTTTA 4949
