Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08386
- Subject:
- NM_001177840.1
- Aligned Length:
- 1521
- Identities:
- 499
- Gaps:
- 966
Alignment
Query 1 ATGCAAAGTTGTGAATCCAGTGGTGACAGTGCGGATGACCCTCTCAGTCGCGGCCTACGGAGAAGGGGACAGCC 74
|||||||||||||||||||||||.||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 1 ATGCAAAGTTGTGAATCCAGTGGCGACAGTGCGGATGACCCTCTCAGTCGTGGCCTACGGAGAAGGGGACAGCC 74
Query 75 TCGTGTGGTGGTGATCGGCGCCGGCTTGGCTGGCCTGGCTGCAGCCAAAGCACTTCTTGAGCAGGGTTTCACGG 148
||||||||||||||||||.||.|||||||||||||||||||||||.|.|||.|||||.||||||||.|||||||
Sbjct 75 TCGTGTGGTGGTGATCGGTGCTGGCTTGGCTGGCCTGGCTGCAGCTAGAGCCCTTCTGGAGCAGGGCTTCACGG 148
Query 149 ATGTCACTGTGCTTGAGGCTTCCAGCCACATCGGAGGCCGTGTGCAGAGTGTGAAACTTGGACACGCCACCTTT 222
|||||||||||||||||||||||||||||||.||.|||||||||||||||||||..||||||.||.||||||||
Sbjct 149 ATGTCACTGTGCTTGAGGCTTCCAGCCACATTGGGGGCCGTGTGCAGAGTGTGAGGCTTGGAGACACCACCTTT 222
Query 223 GAGCTGGGAGCCACCTGGATCCATGGCTCCCATGGGAACCCTATCTATCATCTAGCAGAAGCCAACGGCCTCCT 296
||||||||||||||||||||||||||.|||||.|||||.|||||||||||.||||||||||||||.|||||..|
Sbjct 223 GAGCTGGGAGCCACCTGGATCCATGGATCCCACGGGAATCCTATCTATCAACTAGCAGAAGCCAATGGCCTTTT 296
Query 297 GGAAGAGACAACCGATGGGGAACGCAGCGTGGGCCGCATCAGCCTCTATTCCAAGAATGGCGTGGCCTGCTACC 370
||||||||||||.||||||||.|||||.|||||||||||||||||.||.|||||||||||||||||||||||||
Sbjct 297 GGAAGAGACAACAGATGGGGAGCGCAGTGTGGGCCGCATCAGCCTTTACTCCAAGAATGGCGTGGCCTGCTACC 370
Query 371 TTACCAACCACGGCCGCAGGATCCCCAAGGACGTGGTTGAGGAATTCAGCGATTTATACAACGAGGTCTATAAC 444
|||||||||..|||.||.|.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TTACCAACCGTGGCTGCCGCATCCCCAAGGACGTGGTTGAGGAATTCAGCGATTTATACAACGAG--------- 435
Query 445 TTGACC----CAGGAGTTCT--TCCGG------CACGATAAACCAGTCAATGCTGAAAGTCAAAATAGCGTGGG 506
|| ||||.|.||| ||||| ||| |.||| |.|||| |.||
Sbjct 436 ----CCCATGCAGGTGCTCTTCTCCGGGGAGGCCAC---ACACC----------GCAAGT---ACTA------- 482
Query 507 GGTGTTCAC--CCGAGAGGAGGTGCGTAACCGCATCAGGAATG-ACCCTGACGACCCAGAGGCTACCAAGCGCC 577
.|.||| ||.| .||||| || || .|.|||.|.|.|..||||| ||||
Sbjct 483 ---CTCCACCACCCA----CGGTGC---------TC-----TGCTCTCTGGCCAGCGCGAGGC-------CGCC 528
Query 578 TGAAGCTCGCCATGATCCAGCAGTACCTGAAGGTGGAGAGCTGTGAGAGCAGCTCACACAGCATGGACGAGGTG 651
.| |||| |||.||..||||| ||||.||.| || |||| |||.|
Sbjct 529 CG--GCTC------ATCGAGATGTACC--------GAGACCTCT---------TC---CAGC-------AGGGG 567
Query 652 TCCCTGAGCGCCTTCGGGGAGTGGACCGAGATCCCCGGCGCTCACCACATCATCCCCTCGGGCTTCATGCGGGT 725
.||
Sbjct 568 CCC----------------------------------------------------------------------- 570
Query 726 TGTGGAGCTGCTGGCGGAGGGCATCCCTGCCCACGTCATCCAGCTAGGGAAACCTGTCCGCTGCATTCACTGGG 799
Sbjct 571 -------------------------------------------------------------------------- 570
Query 800 ACCAGGCCTCAGCCCGCCCCAGAGGCCCTGAGATTGAGCCCCGGGGTGTGCTAAAGAGGCAGTACACCAGTTTC 873
Sbjct 571 -------------------------------------------------------------------------- 570
Query 874 TTCCGGCCAGGCCTGCCCACAGAGAAGGTGGCTGCCATCCACCGCCTGGGCATTGGCACCACCGACAAGATCTT 947
Sbjct 571 -------------------------------------------------------------------------- 570
Query 948 TCTGGAATTCGAGGAGCCCTTCTGGGGCCCTGAGTGCAACAGCCTACAGTTTGTGTGGGAGGACGAAGCGGAGA 1021
Sbjct 571 -------------------------------------------------------------------------- 570
Query 1022 GCCACACCCTCACCTACCCACCTGAGCTCTGGTACCGCAAGATCTGCGGCTTTGATGTCCTCTACCCGCCTGAG 1095
Sbjct 571 -------------------------------------------------------------------------- 570
Query 1096 CGCTACGGCCATGTGCTGAGCGGCTGGATCTGCGGGGAGGAGGCCCTCGTCATGGAGAAGTGTGATGACGAGGC 1169
Sbjct 571 -------------------------------------------------------------------------- 570
Query 1170 AGTGGCCGAGATCTGCACGGAGATGCTGCGTCAGTTCACAGGGAACCCCAACATTCCAAAACCTCGGCGAATCT 1243
Sbjct 571 -------------------------------------------------------------------------- 570
Query 1244 TGCGCTCGGCCTGGGGCAGCAACCCTTACTTCCGCGGCTCCTATTCATACACGCAGGTGGGCTCCAGCGGGGCG 1317
Sbjct 571 -------------------------------------------------------------------------- 570
Query 1318 GATGTGGAGAAGCTGGCCAAGCCCCTGCCGTACACGGAGAGCTCAAAGACAGCGCCCATGCAGGTGCTGTTTTC 1391
Sbjct 571 -------------------------------------------------------------------------- 570
Query 1392 CGGTGAGGCCACCCACCGCAAGTACTATTCCACCACCCACGGTGCTCTGCTGTCCGGCCAGCGTGAGGCTGCCC 1465
Sbjct 571 -------------------------------------------------------------------------- 570
Query 1466 GCCTCATTGAGATGTACCGAGACCTCTTCCAGCAGGGGACC 1506
Sbjct 571 ----------------------------------------- 570
