Nucleotide Global Alignment

Description

• Query: ccsbBroad304_08386
• Subject: XM_011239475.1
• Aligned Length: 1506
• Identities: 764
• Gaps: 672

Alignment

Query    1  ATGCAAAGTTGTGAATCCAGTGGTGACAGTGCGGATGACCCTCTCAGTCGCGGCCTACGGAGAAGGGGACAGCC  74
            |||||||||||||||||||||||.||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct    1  ATGCAAAGTTGTGAATCCAGTGGCGACAGTGCGGATGACCCTCTCAGTCGTGGCCTACGGAGAAGGGGACAGCC  74

Query   75  TCGTGTGGTGGTGATCGGCGCCGGCTTGGCTGGCCTGGCTGCAGCCAAAGCACTTCTTGAGCAGGGTTTCACGG  148
            ||||||||||||||||||.||.|||||||||||||||||||||||.|.|||.|||||.||||||||.|||||||
Sbjct   75  TCGTGTGGTGGTGATCGGTGCTGGCTTGGCTGGCCTGGCTGCAGCTAGAGCCCTTCTGGAGCAGGGCTTCACGG  148

Query  149  ATGTCACTGTGCTTGAGGCTTCCAGCCACATCGGAGGCCGTGTGCAGAGTGTGAAACTTGGACACGCCACCTTT  222
            |||||||||||||||||||||||||||||||.||.|||||||||||||||||||..||||||.||.||||||||
Sbjct  149  ATGTCACTGTGCTTGAGGCTTCCAGCCACATTGGGGGCCGTGTGCAGAGTGTGAGGCTTGGAGACACCACCTTT  222

Query  223  GAGCTGGGAGCCACCTGGATCCATGGCTCCCATGGGAACCCTATCTATCATCTAGCAGAAGCCAACGGCCTCCT  296
            ||||||||||||||||||||||||||.|||||.|||||.|||||||||||.||||||||||||||.|||||..|
Sbjct  223  GAGCTGGGAGCCACCTGGATCCATGGATCCCACGGGAATCCTATCTATCAACTAGCAGAAGCCAATGGCCTTTT  296

Query  297  GGAAGAGACAACCGATGGGGAACGCAGCGTGGGCCGCATCAGCCTCTATTCCAAGAATGGCGTGGCCTGCTACC  370
            ||||||||||||.||||||||.|||||.|||||||||||||||||.||.|||||||||||||||||||||||||
Sbjct  297  GGAAGAGACAACAGATGGGGAGCGCAGTGTGGGCCGCATCAGCCTTTACTCCAAGAATGGCGTGGCCTGCTACC  370

Query  371  TTACCAACCACGGCCGCAGGATCCCCAAGGACGTGGTTGAGGAATTCAGCGATTTATACAACGAGGTCTATAAC  444
            |||||||||..|||.||.|.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TTACCAACCGTGGCTGCCGCATCCCCAAGGACGTGGTTGAGGAATTCAGCGATTTATACAACGAGGTCTATAAC  444

Query  445  TTGACCCAGGAGTTCTTCCGGCACGATAAACCAGTCAATGCTGAAAGTCAAAATAGCGTGGGGGTGTTCACCCG  518
            .||||||||||||||||||||||.|.|||||||||||||||.||.|||||.||.|||||.||||||||||||||
Sbjct  445  ATGACCCAGGAGTTCTTCCGGCATGGTAAACCAGTCAATGCCGAGAGTCAGAACAGCGTCGGGGTGTTCACCCG  518

Query  519  AGAGGAGGTGCGTAACCGCATCAGGAATGACCCTGACGACCCAGAGGCTACCAAGCGCCTGAAGCTCGCCATGA  592
            .|||.|||||||.||.|||||||||.||||||||||||||.|||||||.|||||||||||||||||||||||||
Sbjct  519  GGAGAAGGTGCGGAATCGCATCAGGGATGACCCTGACGACACAGAGGCCACCAAGCGCCTGAAGCTCGCCATGA  592

Query  593  TCCAGCAGTACCTGAAGGTGGAGAGCTGTGAGAGCAGCTCACACAGCATGGACGAGGTGTCCCTGAGCGCCTTC  666
            |||||||||||||||                             |||||.||                      
Sbjct  593  TCCAGCAGTACCTGA-----------------------------AGCATAGA----------------------  615

Query  667  GGGGAGTGGACCGAGATCCCCGGCGCTCACCACATCATCCCCTCGGGCTTCATGCGGGTTGTGGAGCTGCTGGC  740
                                                                            ||||      
Sbjct  616  ----------------------------------------------------------------AGCT------  619

Query  741  GGAGGGCATCCCTGCCCACGTCATCCAGCTAGGGAAACCTGTCCGCTGCATTCACTGGGACCAGGCCTCAGCCC  814
                                                                                      
Sbjct  620  --------------------------------------------------------------------------  619

Query  815  GCCCCAGAGGCCCTGAGATTGAGCCCCGGGGTGTGCTAAAGAGGCAGTACACCAGTTTCTTCCGGCCAGGCCTG  888
                                                                                      
Sbjct  620  --------------------------------------------------------------------------  619

Query  889  CCCACAGAGAAGGTGGCTGCCATCCACCGCCTGGGCATTGGCACCACCGACAAGATCTTTCTGGAATTCGAGGA  962
             ||||||||.||              |.||||||                                        
Sbjct  620  -CCACAGAGCAG--------------CAGCCTGG----------------------------------------  638

Query  963  GCCCTTCTGGGGCCCTGAGTGCAACAGCCTACAGTTTGTGTGGGAGGACGAAGCGGAGAGCCACACCCTCACCT  1036
                                                                                ||||||
Sbjct  639  --------------------------------------------------------------------TCACCT  644

Query 1037  ACCCACCTGAGCTCTGGTACCGCAAGATCTGCGGCTTTGATGTCCTCTACCCGCCTGAGCGCTACGGCCATGTG  1110
                                                         |.||||..||                   
Sbjct  645  ---------------------------------------------TTTACCATCC-------------------  654

Query 1111  CTGAGCGGCTGGATCTGCGGGGAGGAGGCCCTCGTCATGGAGAAGTGTGATGACGAGGCAGTGGCCGAGATCTG  1184
                                                      ||||                 |||.||     
Sbjct  655  ------------------------------------------AAGT-----------------GCCCAG-----  664

Query 1185  CACGGAGATGCTGCGTCAGTTCACAGGGAACCCCAACATTCCAAAACCTCGGCGAATCTTGCGCTCGGCCTGGG  1258
                                              ||||.||                           ||||| 
Sbjct  665  ----------------------------------AACAATC---------------------------CCTGG-  676

Query 1259  GCAGCAACCCTTACTTCCGCGGCTCCTATTCATACACGCAGGTGGGCTCCAGCGGGGCGGATGTGGAGAAGCTG  1332
                  |||||                         .|.||  ||||||||                       
Sbjct  677  ------ACCCT-------------------------AGTAG--GGGCTCCA-----------------------  694

Query 1333  GCCAAGCCCCTGCCGTACACGGAGAGCTCAAAGACAGCGCCCATGCAGGTGCTGTTTTCCGGTGAGGCCACCCA  1406
                           ||.|                   |||||||||||||||.||.|||||.||||||||.||
Sbjct  695  ---------------TAAA-------------------GCCCATGCAGGTGCTCTTCTCCGGGGAGGCCACACA  734

Query 1407  CCGCAAGTACTATTCCACCACCCACGGTGCTCTGCTGTCCGGCCAGCGTGAGGCTGCCCGCCTCATTGAGATGT  1480
            ||||||||||||.|||||||||||||||||||||||.||.||||||||.|||||.|||||.|||||.|||||||
Sbjct  735  CCGCAAGTACTACTCCACCACCCACGGTGCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCGGCTCATCGAGATGT  808

Query 1481  ACCGAGACCTCTTCCAGCAGGGGACC  1506
            |||||||||||||||||||||||.||
Sbjct  809  ACCGAGACCTCTTCCAGCAGGGGCCC  834