Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08386
- Subject:
- XR_374452.1
- Aligned Length:
- 2170
- Identities:
- 830
- Gaps:
- 1265
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGCTGTGCCGCGGGCAACTCCAGGCTGGGTGGCCTCGGGCTCCCCGCCCCCGGTGGGCGGGCCCGGGGCGGAGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACCCAGGCGGGGTGGGCCGGGGACGCGAGGCGGAGCGGGGCCCCCGCACAGGCCCCGGCGGCTGGCTCGGCCCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACGGTCCCGGCGGCGGCTGCAGGAGGAAGCCCAGTGGCTGCGGAGGAGGGGAGGCGGAGAGGCCGAGGCCGCTC 222
Query 1 ---------------------------------------------------------ATGCAAAGTTGTGAATC 17
|||||||||||||||||
Sbjct 223 GCGAAGACGCTCCCGGGCTCCGCAAGGAAAGGCTCCTAGAAGGTGAGCACGGACGGCATGCAAAGTTGTGAATC 296
Query 18 CAGTGGTGACAGTGCGGATGACCCTCTCAGTCGCGGCCTACGGAGAAGGGGACAGCCTCGTGTGGTGGTGATCG 91
||||||.||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CAGTGGCGACAGTGCGGATGACCCTCTCAGTCGTGGCCTACGGAGAAGGGGACAGCCTCGTGTGGTGGTGATCG 370
Query 92 GCGCCGGCTTGGCTGGCCTGGCTGCAGCCAAAGCACTTCTTGAGCAGGGTTTCACGGATGTCACTGTGCTTGAG 165
|.||.|||||||||||||||||||||||.|.|||.|||||.||||||||.||||||||||||||||||||||||
Sbjct 371 GTGCTGGCTTGGCTGGCCTGGCTGCAGCTAGAGCCCTTCTGGAGCAGGGCTTCACGGATGTCACTGTGCTTGAG 444
Query 166 GCTTCCAGCCACATCGGAGGCCGTGTGCAGAGTGTGAAACTTGGACACGCCACCTTTGAGCTGGGAGCCACCTG 239
||||||||||||||.||.|||||||||||||||||||..||||||.||.|||||||||||||||||||||||||
Sbjct 445 GCTTCCAGCCACATTGGGGGCCGTGTGCAGAGTGTGAGGCTTGGAGACACCACCTTTGAGCTGGGAGCCACCTG 518
Query 240 GATCCATGGCTCCCATGGGAACCCTATCTATCATCTAGCAGAAGCCAACGGCCTCCTGGAAGAGACAACCGATG 313
|||||||||.|||||.|||||.|||||||||||.||||||||||||||.|||||..|||||||||||||.||||
Sbjct 519 GATCCATGGATCCCACGGGAATCCTATCTATCAACTAGCAGAAGCCAATGGCCTTTTGGAAGAGACAACAGATG 592
Query 314 GGGAACGCAGCGTGGGCCGCATCAGCCTCTATTCCAAGAATGGCGTGGCCTGCTACCTTACCAACCACGGCCGC 387
||||.|||||.|||||||||||||||||.||.||||||||||||||||||||||||||||||||||..|||.||
Sbjct 593 GGGAGCGCAGTGTGGGCCGCATCAGCCTTTACTCCAAGAATGGCGTGGCCTGCTACCTTACCAACCGTGGCTGC 666
Query 388 AGGATCCCCAAGGACGTGGTTGAGGAATTCAGCGATTTATACAACGAGGTCTATAACTTGACCCAGGAGTTCTT 461
.|.||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 667 CGCATCCCCAAGGACGTGGTTGAGGAATTCAGCGATTTATACAACGAGGTCTATAACATGACCCAGGAGTTCTT 740
Query 462 CCGGCACGATAAACCAGTCAATGCTGAAAGTCAAAATAGCGTGGGGGTGTTCACCCGAGAGGAGGTGCGTAACC 535
||||||.|.|||||||||||||||.||.|||||.||.|||||.||||||||||||||.|||.|||||||.||.|
Sbjct 741 CCGGCATGGTAAACCAGTCAATGCCGAGAGTCAGAACAGCGTCGGGGTGTTCACCCGGGAGAAGGTGCGGAATC 814
Query 536 GCATCAGGAATGACCCTGACGACCCAGAGGCTACCAAGCGCCTGAAGCTCGCCATGATCCAGCAGTACCTGAAG 609
||||||||.||||||||||||||.|||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GCATCAGGGATGACCCTGACGACACAGAGGCCACCAAGCGCCTGAAGCTCGCCATGATCCAGCAGTACCTGA-- 886
Query 610 GTGGAGAGCTGTGAGAGCAGCTCACACAGCATGGACGAGGTGTCCCTGAGCGCCTTCGGGGAGTGGACCGAGAT 683
Sbjct 887 -------------------------------------------------------------------------- 886
Query 684 CCCCGGCGCTCACCACATCATCCCCTCGGGCTTCATGCGGGTTGTGGAGCTGCTGGCGGAGGGCATCCCTGCCC 757
Sbjct 887 -------------------------------------------------------------------------- 886
Query 758 ACGTCATCCAGCTAGGGAAACCTGTCCGCTGCATTCACTGGGACCAGGCCTCAGCCCGCCCCAGAGGCCCTGAG 831
Sbjct 887 -------------------------------------------------------------------------- 886
Query 832 ATTGAGCCCCGGGGTGTGCTAAAGAGGCAGTACACCAGTTTCTTCCGGCCAGGCCTGCCCACAGAGAAGGTGGC 905
Sbjct 887 -------------------------------------------------------------------------- 886
Query 906 TGCCATCCACCGCCTGGGCATTGGCACCACCGACAAGATCTTTCTGGAATTCGAGGAGCCCTTCTGGGGCCCTG 979
Sbjct 887 -------------------------------------------------------------------------- 886
Query 980 AGTGCAACAGCCTACAGTTTGTGTGGGAGGACGAAGCGGAGAGCCACACCCTCACCTACCCACCTGAGCTCTGG 1053
Sbjct 887 -------------------------------------------------------------------------- 886
Query 1054 TACCGCAAGATCTGCGGCTTTGATGTCCTCTACCCGCCTGAGCGCTACGGCCATGTGCTGAGCGGCTGGATCTG 1127
Sbjct 887 -------------------------------------------------------------------------- 886
Query 1128 CGGGGAGGAGGCCCTCGTCATGGAGAAGTGTGATGACGAGGCAGTGGCCGAGATCTGCACGGAGATGCTGCGTC 1201
Sbjct 887 -------------------------------------------------------------------------- 886
Query 1202 AGTTCACAGGGAACCCCAACATTCCAAAACCTCGGCGAATCTTGCGCTCGGCCTGGGGCAGCAACCCTTACTTC 1275
||||||||||||.||.|||||||||.||||||||.|||||||.|||||||||||||||||.||||||
Sbjct 887 -------AGGGAACCCCAATATACCAAAACCTAGGCGAATCCTGCGCTCAGCCTGGGGCAGCAACCCATACTTC 953
Query 1276 CGCGGCTCCTATTCATACACGCAGGTGGGCTCCAGCGGGGCGGATGTGGAGAAGCTGGCCAAGCCCCTGCCGTA 1349
||.||.||||||||.|||||.|||||||||||.||.||||||||||||||||||||.||||||||||||||.||
Sbjct 954 CGGGGTTCCTATTCCTACACACAGGTGGGCTCAAGTGGGGCGGATGTGGAGAAGCTAGCCAAGCCCCTGCCCTA 1027
Query 1350 CACGGAGAGCTCAAAGACAGC----------------------------------------------------- 1370
|||.||||||||.||||||||
Sbjct 1028 CACAGAGAGCTCCAAGACAGCGCATAGAAGCTCCACAGAGCAGCAGCCTGGTCACCTTTTACCATCCAAGTGCC 1101
Query 1371 -------------------------------------GCCCATGCAGGTGCTGTTTTCCGGTGAGGCCACCCAC 1407
|||||||||||||||.||.|||||.||||||||.|||
Sbjct 1102 CAGAACAATCCCTGGACCCTAGTAGGGGCTCCATAAAGCCCATGCAGGTGCTCTTCTCCGGGGAGGCCACACAC 1175
Query 1408 CGCAAGTACTATTCCACCACCCACGGTGCTCTGCTGTCCGGCCAGCGTGAGGCTGCCCGCCTCATTGAGATGTA 1481
|||||||||||.|||||||||||||||||||||||.||.||||||||.|||||.|||||.|||||.||||||||
Sbjct 1176 CGCAAGTACTACTCCACCACCCACGGTGCTCTGCTCTCTGGCCAGCGCGAGGCCGCCCGGCTCATCGAGATGTA 1249
Query 1482 CCGAGACCTCTTCCAGCAGGGGACC------------------------------------------------- 1506
||||||||||||||||||||||.||
Sbjct 1250 CCGAGACCTCTTCCAGCAGGGGCCCTGAAAGGTGTCCTCACTGCCAAATGTGTTCCTTGAAGAACCACTAACTC 1323
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 1324 GTGACTGCTGGTCCTCGTCCCTTGCCCCCGTGCTCTTAATTTCCTAATTGTCTGTAGAATGGAATTTTACCTTC 1397
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 1398 TGTAGTGGACACCGGGCTGACGTCAGACCTGGCCCGAGAGCTTTTCTTTTTCTCCAGGCTGGGTAATGACCAGG 1471
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 1472 TGGGGTTCTGCTTCCTGCTTTTTTCCTCTCTCATGTTATTGCAAGTGCCTTCAATACTTTGCATTTTGGGATAA 1545
Query 1507 ------------------------ 1506
Sbjct 1546 TAAAAGAAGTGACCCTTCCCACGC 1569
