Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08390
- Subject:
- NR_126056.2
- Aligned Length:
- 3700
- Identities:
- 976
- Gaps:
- 2722
Alignment
Query 1 ------------------------ATGCGGTCCCGGGTTCTGTGGGGCGCTGCCCGGTGGCTCTGGCCCCGCCG 50
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AGGGTCCGCGATCTCGGACTAAGGATGCGGTCCCGGGTTCTGTGGGGCGCTGCCCGGTGGCTCTGGCCCCGCCG 74
Query 51 GGCCGTTGGCCCAGCCCGCCGGCCCCTGAGCTCCGGTAGCCCGCCGCTGGAGGAGCTGTTCGCCCGGGGCGGGC 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 75 GGCCGTTGGCCCAGCCCGCCGGCCCCTGAGCTCCGGTAGCCCGCCGCTGGAGGAGCTGTTCACCCGGGGCGGGC 148
Query 125 CCTTGCGGACCTTCCTCGAGCGCCAGGCGGGGTCTGAAGCCCATTTGAAGGTCAGGAGGCCCGAGTTGCTGGCG 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCTTGCGGACCTTCCTCGAGCGCCAGGCGGGGTCTGAAGCCCATTTGAAGGTCAGGAGGCCCGAGTTGCTGGCG 222
Query 199 GTGATCAAACTGCTGAACGAGAAGGAGCAGGAGCTGCGGGAGACTGAGCACTTGCTGCACGATGAGAATGAAGA 272
||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GTGATCAAACTGCTGAACGAGAAGGAGCGGGAGCTGCGGGAGACTGAGCACTTGCTGCACGATGAGAATGAAGA 296
Query 273 TTTAAGGAAACTTGCAGAGAATGAAATCACTTTGTGTCAAAAAGAAATAACTCAGCTGAAGCATCAGATTATCT 346
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TTTAAGGAAACTTGCAGAGAATGAAATCACTTTGTGTCAAAAAGAAATAACTCAGCTGAAGCA----------- 359
Query 347 TACTTTTGGTTCCCTCAGAAGAAACAGATGAAAATGATTTGATCCTGGAAGTAACTGCAGGAGTTGGAGGTCAG 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 --------------TCAGAAGAAACAGATGAAAATGATTTGATCCTGGAAGTAACTGCAGGAGTTGGAGGTCAG 419
Query 421 GAGGCAATGTTGTTTACATCAGAGATATTTGATATGTATCAGCAATATGCTGCATTTAAAAGATGGCATTTTGA 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 GAGGCAATGTTGTTTACATCAGAGATATTTGATATGTATCAGCAATATGCTGCATTTAAAAGATGGCATTTTGA 493
Query 495 AACCCTGGAATATTTTCCAAGTGAACTAGGTGGCCTTAGACATGCATCTGCCAGCATTGGGGGTTCAGAAGCCT 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 494 AACCCTGGAATATTTTCCAAGTGAACTAGGTGGCCTTAGACATGCATCTGCCAGCATTGGGGGTTCAGAAGCCT 567
Query 569 ATAGGCACATGAAATTTGAAGGAGGTGTTCACAGAGTACAAAGAGTGCCAAAGACAGAAAAGCAAGGCCGCGTC 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 568 ATAGGCACATGAAATTTGAAGGAGGTGTTCACAGAGTACAAAGAGTGCCAAAGACAGAAAAGCAAGGCCGCGTC 641
Query 643 CATACTAGCACCATGACTGTAGCAATATTACCCCAGCCTACTGAGATTAATCTGGTGATTAATCCGAAAGATTT 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 642 CATACTAGCACCATGACTGTAGCAATATTACCCCAGCCTACTGAGATTAATCTGGTGATTAATCCGAAAGATTT 715
Query 717 GAGAATTGACACTAAGCGAGCCAGTGGAGCTGGGGGGCAGCATGTAAATACCACGGACAGTGCTGTCCGGATAG 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 716 GAGAATTGACACTAAGCGAGCCAGTGGAGCTGGGGGGCAGCATGTAAATACCACGGACAGTGCTGTCCGGATAG 789
Query 791 TTCATCTTCCAACAGGTGTTGTTTCTGAATGTCAACAAGAGAGATCTCAGCTGAAAAATAAAGAGCTGGCTATG 864
||||||||||||
Sbjct 790 TTCATCTTCCAA-------------------------------------------------------------- 801
Query 865 ACAAAGTTACGTGCAAAACTGTACAGCATGCATCTAGAAGAAGAAATAAATAAAAGACAGAATGCTAGAAAAAT 938
Sbjct 802 -------------------------------------------------------------------------- 801
Query 939 TCAGATTGGAAGTAAAGGAAGATCAGAGAAAATAAGAACATATAATTTTCCACAGAACCGGGTCACAGATCACA 1012
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 802 -CAGATTGGAAGTAAAGGAAGATCAGAGAAAATAAGAACATATAATTTTCCACAGAACCGGGTCACAGATCACA 874
Query 1013 GAATAAACAAGACGCTGCATGATCTTGAAACTTTTATGCAAGGAGATTATCTACTGGATGAACTTGTACAGTCA 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 875 GAATAAACAAGACGCTGCATGATCTTGAAACTTTTATGCAAGGAGATTATCTACTGGATGAACTTGTACAGTCA 948
Query 1087 TTGAAGGAATACGCCGATTATGAATCTTTAGTAGAAATTATTTCCCAAAAAGTT-------------------- 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 949 TTGAAGGAATACGCCGATTATGAATCTTTAGTAGAAATTATTTCCCAAAAAGTTTAAGTTGATTTGTTATTTAT 1022
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1023 AGACTTTCGTAGCTTAGAAAAATTCTACAGTACATCCACATAGGGTGAAAGTACCCTTACTCTCTTGAAAAACG 1096
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1097 TTGAGTTAACACAGTTGGAGGTAATATGCATATTCTGAAGTCATAGATAATTTACACAGATCTCTCTCAATGCA 1170
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1171 TTAGCAAAAATCATACAATATACAGATGGTCCTCGATTTACATTGTGGTTAATTCCCAATAAACCCATCATAAG 1244
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1245 TTAAAAATGCATATAACGTTAGCAACACAGCAGTCTCCTAATTAATGACAGCTTGACTTAACAATTTTCCAACT 1318
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1319 TTACCATGGTGTGAAAGAGGTATGATTCCTAAGCCCTAAGGAGCTCCTCAGCTTGAAATGGGGCTGCATCCCTA 1392
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1393 TAAACCCATCATAAAGTCAAAAAATCCTAAAACATAAGTTGGTGACCATCTGTAATCATGATGTGGTGGTAAAT 1466
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1467 CTTGGACGCTACCTTACAATAACTAGACAAAGGAAAATCATCCTTTGTCCTGTTCTGTGTAAATATTTAATGAA 1540
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1541 TGATCAAAACTTCAGTTTAAATATTATGAAAAACTTTAAACATAAAGTAGTAGAAATAAGACAGTAAATACTGT 1614
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1615 ATCCTAATATCCAGTCAGGATACAGAAACCATACCATTAACTTGAACAGGGATAATTTTAATATAAAAACTGTT 1688
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1689 AACTGATAATGGTATTAACTTTTAAGAGGGATGAAAGAGAGCTATGATGTCCTAGGACTGAGAGTACCCCAGGA 1762
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1763 AAGAATACCCTTGAAAGGGTCTCCCCTTCCCCATGGTGAAGTCAGGCCTAATGGAGAGAGTGGCTACAGCCTAC 1836
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1837 TCAGTGATTGGGAAATTCCCTGTCTTGCCCTGGGCCAGAGCTGGTGTACCGCTGGTGGATCAGGTCTTACAAGC 1910
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1911 AAAGAACCTCACACTCCCAACTGGTAAGCCAGAAGCCTCTTGCTAGGGTGTGAGCAAAACTTGGACAGGAACTC 1984
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1985 TCAGTAGATGTTTGTGTTTGTCAAGATTCTCCAGACAAACTTCCTTAAAAGGATTGGCTTGTGTTGTTATTATT 2058
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2059 AAGTCTAACAAGTCCAAAAGCTGGAGTGTGAGGCAGGAGGCTGGAAACCCAGGAAAGCTGATGGTGCAAGGTCC 2132
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2133 AGTCCAAAGGTATCTGTTGGAGGATTCTCTTGTTCTGGGAAGAGGACGGTCTTTTTTTCTCTTCAGACCTTCAC 2206
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2207 CTGACTGGATCAAGCCCACTAACATCGAGGAGGACAGTCTGCATTACTCAGAGTTCACTGATTGATTTAAATGT 2280
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2281 CAATCTCATATAAAACACCCTCACAGAAACACCTAGAATAATGTTTGACCTTATAATTGGAAAATCAGAGCAAA 2354
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2355 AGTTAAATCTCAAAAAAAAAAAAAAAAAAAGTATGACCCAGTAGCTAGGCACCTGTGGCCCCGCCAAGTTGACA 2428
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2429 CATAAAATTAACTGTCACAGTATCATCTTAGAAGTGAAAGAAGCCCCTTTATCCTGCAGTGCCCCTCTACCACC 2502
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2503 ACCTACTGACAAAGAACATGGTGCTATCTGGCATGGGAGAAATGTTCAGTTTGCTATGGCTTGTATGTGTCCCC 2576
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2577 TCAAATTCAAGTGTTGCCAATGTGACAGCATCAAGAGGTGGGGTCTTTAAGAGATCACTAGGCCATGAGGGATT 2650
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2651 CTCTTAGGACTGGGATGAAGGCCCATAATAAAAGAGGTTTCGGGGAGCATCCTGCTAGCTTGCCTTCTGTATGT 2724
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2725 GAGAACACAGCAAGAAAGCCCTAGTCAACAAGTGCCAGCTCCTTGATCTTAGACTTCCCATCCTCCAGAACTGT 2798
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2799 GAGAAATACATTTCTGTTCCTTACAAATTACCCAGTCTCCTGTATTCTGTTATAGCAGCACAAAATGAAGATAC 2872
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2873 CATACCTGAACACCTGAACATTCTTCACAAGGTAGTAAATGCACTGCTTTATTCTGGTCTCAGTATTGTGTGCT 2946
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2947 TAATAAGGAAATGAGAAAGGGTGGATCAGGGCATAGGATGAACAAGTTACTGCTAGACCTCTCACAATGCCACT 3020
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 3021 AATGGATAAGATTGTATTTTCATCATTCTTGTCTCTTCGGAAGCTAACACCATGCTATAATAGGCACTAAATAG 3094
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 3095 ATGTCTAAAAACACCTTAAGTATTTGTCTAGAAATCTGGTGCATTGTTCAGAAAGAACCAAAATTCAAAATAAT 3168
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 3169 TTCAAAGGGCCTAAAGCACTAGTTAATCAAAATTCATTAGTTTTTAATGGTACTACCACTCTCAAATTTAAAAT 3242
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 3243 GTCATCTTACGTTCCTCTTCCTCGCATTGGATTTATTGCTAAAACCTGGTAAACACTTTTAATCCTTTTCAATT 3316
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 3317 CCATTACCACTGCTCTTGTCCAGAATTACTTCGCAGACTAATAGTCACCTGACTTCTCCCCTGCATCCGATTTG 3390
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 3391 CTGTCTAATTCTGGTTACAAATAAGTAACTGCCAAACTAATCTTTCTAAAAAGCAAGACTGATCTCGTCACTCC 3464
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 3465 TTTGCTCAACAATGTAAAAGCTCCCATTGTCTCCCAAATAAAACCAGCTTTCCACTGTGTATACAATACATCCA 3538
