Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08412
Subject:
XR_001753711.1
Aligned Length:
2326
Identities:
763
Gaps:
1562

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TCGAATATTTTCCATGATCAAACGCTGTTCATTGGCTTTCCCTCCTCCGCTAAGGCGGAGCCTACTTCTCTTGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCTCCCATTTGGGTCGTGCCATTCTCAGGGGAACCAACCCCAATACCTAAGGGAGGCTGGGAGGCGTGTCCTCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGACCGTAGTTCTTATTGGTTTCGCTGCTCGCTGTGGGGTGGGCTGGTGCAGCCGCAGCTGTTGCTTATTGGCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CACCGATTCCATGGGGAGGAACTTGGCTGGGCCTAAACTCAATCCGTGGTCTGGTACAGGTTTCAGGGCAAAGC  296

Query    1  ----ATGCGTTCCGGGGGCCGCGGGCGACCCCGCCTGCGGCTGGGGGAACGTGGCCTCATGGAGCCACTCTTGC  70
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGCCATGCGTTCCGGGGGCCGCGGGCGACCCCGCCTGCGGCTGGGGGAACGTGGCCTCATGGAGCCACTCTTGC  370

Query   71  CGCCGAAGCGCCGCCTGCTACCGCGGGTTCGGCTCTTGCCTCTGTTGCTGGCGCTGGCCGTGGGCTCGGCGTTC  144
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CGCCGAAGCGCCGCCTGCTACCGCGGGTTCGGCTCTTGCCTCTGTTGCTGGCGCTGGCCGTGGGCTCGGCGTTC  444

Query  145  TACACCATTTGGAGCGGCTGGCACCGCAGGACTGAGGAGCTGCCGCTGGGCCGGGAGCTGCGGGTCCCATTGAT  218
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TACACCATTTGGAGCGGCTGGCACCGCAGGACTGAGGAGCTGCCGCTGGGCCGGGAGCTGCGGGTCCCATTGAT  518

Query  219  CGGAAGCCTCCCCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGTCTCTGGAGCACTTATC  292
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CGGAAGCCTCCCCGAAGCCCGGCTGCGGAGGGTGGTGGGACAACTGGATCCACAGCGTCTCTGGAGCACTTATC  592

Query  293  TGCGCCCCCTGCTGGTTGTGCGAACCCCGGGCAGCCCGGGAAATCTCCAAGTCAGAA-----------------  349
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 
Sbjct  593  TGCGCCCCCTGCTGGTTGTGCGAACCCCGGGCAGCCCGGGAAATCTCCAAGTCAGAAAGTTCCTGGAGGCCACG  666

Query  350  --------------------------------------------------------------------------  349
                                                                                      
Sbjct  667  CTGCGGTCCCTGACAGCAGGTTGGCACGTGGAGCTGGATCCCTTCACAGCCTCAACACCCCTGGGGCCAGTGGA  740

Query  350  --------------------------------------------------------------------------  349
                                                                                      
Sbjct  741  CTTTGGCAATGTGGTGGCCACACTGGACCCAAGGGCTGCCCGTCACCTCACCCTTGCCTGCCATTATGACTCGA  814

Query  350  --------------------------------------------------------------------------  349
                                                                                      
Sbjct  815  AGCTCTTCCCACCCGGATCGACCCCCTTTGTAGGGGCCACGGATTCGGCTGTGCCCTGTGCCCTGCTGCTGGAG  888

Query  350  -------------------------------------------AGGCAGCCCCGGTGACCCTGCAACTGCTCTT  380
                                                       |||||||||||||||||||||||||||||||
Sbjct  889  CTGGCCCAAGCACTTGACCTGGAGCTGAGCAGGGCCAAAAAACAGGCAGCCCCGGTGACCCTGCAACTGCTCTT  962

Query  381  CTTGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGCACCTGGCCCAGC  454
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CTTGGATGGTGAAGAGGCGCTGAAGGAGTGGGGACCCAAGGACTCCCTTTACGGTTCCCGGCACCTGGCCCAGC  1036

Query  455  TCATGGAGTCTATACCTCACAGCCCCGGCCCCACCAGGATCCAGGCTATTGAGCTCTTTATGCTTCTTGATCTC  528
            ||||||||||||||||||||||||||||||||||||||||||||||||||                        
Sbjct 1037  TCATGGAGTCTATACCTCACAGCCCCGGCCCCACCAGGATCCAGGCTATT------------------------  1086

Query  529  CTGGGAGCCCCCAATCCCACCTTCTACAGCCACTTCCCTCGCACGGTCCGCTGGTTCCATCGGCTGAGGAGCAT  602
                                                                                      
Sbjct 1087  --------------------------------------------------------------------------  1086

Query  603  TGAGAAGCGTCTGCACCGTTTGAACCTGCTGCAGTCTCATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGC  676
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1087  --AGAAGCGTCTGCACCGTTTGAACCTGCTGCAGTCTCATCCCCAGGAAGTGATGTACTTCCAACCCGGGGAGC  1158

Query  677  CCTTTGGCTCTGTGGAAGACGACCACATCCCCTTCCTCCGCAGAGGGGTACCCGTGCTCCATCTCATCTCCACG  750
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1159  CCTTTGGCTCTGTGGAAGACGACCACATCCCCTTCCTCCGCAGAGGGGTACCCGTGCTCCATCTCATCTCCACG  1232

Query  751  CCCTTCCCTGCTGTCTGGCACACCCCTGCGGACACCGAGGTCAATCTCCACCCACCCACGGTACACAACTTATG  824
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 1233  CCCTTCCCTGCTGTCTGGCACACCCCTGCGGACACCGAGGTCAATCTCCACCCACCCACGGTACACAACTTGTG  1306

Query  825  CCGCATTCTCGCTGTGTTCCTGGCTGAATACCTGGGGCTC----------------------------------  864
            ||||||||||||||||||||||||||||||||||||||||                                  
Sbjct 1307  CCGCATTCTCGCTGTGTTCCTGGCTGAATACCTGGGGCTCTAGCGTGCTTGGCCAATGACTGTGGAGAGGACTG  1380

Query  865  --------------------------------------------------------------------------  864
                                                                                      
Sbjct 1381  TGAGAGAGAAGGTCCCAGCGGGGGCCAGTGAAGCTCAGGCAGGATCTGCCTAGGGTGTGCTGGTTTGTCCTTTT  1454

Query  865  --------------------------------------------------------------------------  864
                                                                                      
Sbjct 1455  CATACCTTTGTCTCCTAATTGTGCTACAATTGGAAGACCTTCTTTCTTTTGATTGTCTCAAGCTGCCACCCTTC  1528

Query  865  --------------------------------------------------------------------------  864
                                                                                      
Sbjct 1529  AAGGACAGGGAAGAGACCACTGTGGGATGACAGCCAGAGGAATAAGAACTTGCTCCCTCCCCAGAGGTAAACAC  1602

Query  865  --------------------------------------------------------------------------  864
                                                                                      
Sbjct 1603  TTGGTCCAAAGGTTTGCAGGGACCAAATACTGTTCTTTTTTTTTTTGAGACGGAGTCTCACTGTGTTGCCCAGG  1676

Query  865  --------------------------------------------------------------------------  864
                                                                                      
Sbjct 1677  CTGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAAACTCCGCCTCCTGGGTTCACGCCATTCTCCTGCCTCAGC  1750

Query  865  --------------------------------------------------------------------------  864
                                                                                      
Sbjct 1751  CTCCCAAGTAGCTGGGACTACAGGTGCCCGCCACCACGCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGT  1824

Query  865  --------------------------------------------------------------------------  864
                                                                                      
Sbjct 1825  TTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTTGTAATCCGCCAGCCTCGGCCTCCCAAAGTGCTGG  1898

Query  865  --------------------------------------------------------------------------  864
                                                                                      
Sbjct 1899  GATTACAGGTGTGAGCCACCGCACCTGGCAAAATGCTGTTCTTTAAGTCAGCGAACTGAAAAAGTAAAAGACTG  1972

Query  865  --------------------------------------------------------------------------  864
                                                                                      
Sbjct 1973  CTGGGTGTGGTGGCTCACACCTGTAATCCCAACACTTTGAGAGGCTGAGGGGGAAGGATCACCCGAGGTCAGGA  2046

Query  865  --------------------------------------------------------------------------  864
                                                                                      
Sbjct 2047  GTTTGAGACCAGCCTGGTCAACATGGCGAAACCCTGTCTCTACTAAAAATACAATAATTAGCTGGGCATGGTGG  2120

Query  865  --------------------------------------------------------------------------  864
                                                                                      
Sbjct 2121  TGGGCGCCTGTAATCTCAGCTGCTTGGGAGGCTGAGGCAGGAGAATCACTTGTACGCAGGAGGCGGAGGTTGCA  2194

Query  865  --------------------------------  864
                                            
Sbjct 2195  GTGAGCCAAGATCACACCACTGCACTCCAGCC  2226

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