Nucleotide Global Alignment

Description

• Query: ccsbBroad304_08417
• Subject: XM_006537721.3
• Aligned Length: 2046
• Identities: 1335
• Gaps: 555

Alignment

Query    1  ATGACGGCCTCTCCGGATTACTTGGTGGTGCTTTTTGGGATCACTGCTGGGGCCACCGGGGCCAAGCTAGGCTC  74
            ||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||.||.||
Sbjct    1  ATGACGGCGTCTCCGGATTACTTGGTGGTGCTTTTTGGGATCACTGCTGGGGCCACCGGAGCCAAGCTGGGTTC  74

Query   75  GGATGAGAAGGAGTTGATCCTGCTGTTCTGGAAAGTCGTGGATCTGGCCAACAAGAAGGTGGGACAGTTGCACG  148
            |||||||||||||.|||||||||||||.|||||||||||||||.|||||||||||||||||||||||.||||||
Sbjct   75  GGATGAGAAGGAGCTGATCCTGCTGTTATGGAAAGTCGTGGATTTGGCCAACAAGAAGGTGGGACAGCTGCACG  148

Query  149  AAGTGCTAGTTAGACCGGATCAGTTGGAACTGACGGAGGACTGCAAAGAAGAAACTAAAATAGACGTCGAAAGC  222
            ||||.|||||||||||||||||||||||||||||.|||||.||.||||||||||||||||||||||.|||||.|
Sbjct  149  AAGTACTAGTTAGACCGGATCAGTTGGAACTGACAGAGGATTGTAAAGAAGAAACTAAAATAGACGCCGAAAAC  222

Query  223  CTGTCCTCGGCGTCGCAGCTGGACCAAGCCCTCCGACAGTTTAACCAGTCAGTGAGCAATGAACTGAATATTGG  296
            |||||.||.|||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.||
Sbjct  223  CTGTCTTCCGCGCCGCAGCTGGACCAAGCCCTCCGACAGTTTAACCAGTCAGTGAGCAATGAACTGAACATCGG  296

Query  297  AGTAGGGACTTCCTTCTGTCTCTGTACTGATGGGCAGCTTCATGTCAGGCAAATCCTGCATCCTGAGGCTTCCA  370
            .|||||||||||||||||||||||||||||.|||||||||||..|.|||||.|||.|||||||.||||||||||
Sbjct  297  GGTAGGGACTTCCTTCTGTCTCTGTACTGACGGGCAGCTTCACATTAGGCAGATCTTGCATCCCGAGGCTTCCA  370

Query  371  AGAAGAATGTACTATTACCTGAATGCTTCTATTCCTTTTTTGATCTTCGAAAAGAATTCAAGAAATGTTGCCCT  444
            ||||||||||..||.|.|||||.|||||||||||||||||.||||||||.|||||.||||||||.||.|||||.
Sbjct  371  AGAAGAATGTGTTACTGCCTGAGTGCTTCTATTCCTTTTTCGATCTTCGGAAAGAGTTCAAGAAGTGCTGCCCG  444

Query  445  GGTTCACCTGATATTGACAAACTGGACGTTGCCACAATGACAGAGTATTTAAATTTTGAGAAGAGTAGTTCAGT  518
            ||.||.||.|||||.|||||.|||||.||.||..|.||||||||.....|.||.||||||||||||...||.||
Sbjct  445  GGCTCTCCCGATATCGACAAGCTGGATGTCGCAGCGATGACAGAAAGCCTGAACTTTGAGAAGAGTGACTCTGT  518

Query  519  CTCTCGATATGGAGCCTCTCAAGTTGAAGATATGGGGAATATAATTTTAGCAATGATTTCAGAGCCTTATAATC  592
            .||.|||||.||||||||.|||||||||||.||||||||.|||||||||||||||||.||.|||||.||.||||
Sbjct  519  GTCCCGATACGGAGCCTCCCAAGTTGAAGACATGGGGAACATAATTTTAGCAATGATCTCCGAGCCCTACAATC  592

Query  593  ACAGGTTTTCAGATCCAGAGAGAGTGAATTACAAGTTTGAAAGTGGAACTTGCAGCAAGATGGAACTTATTGAT  666
            ||||.||||||||||||||||||||.||.|||||||||||||||||.|||||||||||||||||||||||||||
Sbjct  593  ACAGATTTTCAGATCCAGAGAGAGTAAACTACAAGTTTGAAAGTGGCACTTGCAGCAAGATGGAACTTATTGAT  666

Query  667  GATAACACCGTAGTCAGGGCACGAGGTTTACCATGGCAGTCTTCAGATCAAGATATTGCAAGATTCTTCAAAGG  740
            ||.|.|||.||.||.||.||.||||||||.||.|||||.|||||||||||||||||||||||.|||||||||||
Sbjct  667  GACAGCACAGTGGTGAGAGCTCGAGGTTTGCCCTGGCAATCTTCAGATCAAGATATTGCAAGGTTCTTCAAAGG  740

Query  741  ACTCAATATTGCCAAGGGAGGTGCAGCACTTTGTCTGAATGCTCAGGGTCGAAGGAACGGAGAAGCTCTGGTTA  814
            ||||||||||||||||||.||.|||||||||||.||||||||||||||.||.||||||||||||||||||||||
Sbjct  741  ACTCAATATTGCCAAGGGTGGCGCAGCACTTTGCCTGAATGCTCAGGGCCGGAGGAACGGAGAAGCTCTGGTTA  814

Query  815  GGTTTGTAAGTGAGGAGCACCGAGACCTAGCACTACAGAGGCACAAACATCACATGGGGACCCGGTATATTGAG  888
            |.||||||||||||||||||.||||.|||||.||.||||||||||||||||||||||||||||||||.||||||
Sbjct  815  GATTTGTAAGTGAGGAGCACAGAGATCTAGCCCTGCAGAGGCACAAACATCACATGGGGACCCGGTACATTGAG  888

Query  889  GTTTACAAAGCAACAGGTGAAGATTTCCTTAAAATTGCTGGTGGTACTTCCAATGAGGTAGCCCAGTTTCTCTC  962
            |||||||||||||||||.||||||||||||||||||||.||.||.||.||||||||||||||||||||||||||
Sbjct  889  GTTTACAAAGCAACAGGCGAAGATTTCCTTAAAATTGCCGGAGGGACATCCAATGAGGTAGCCCAGTTTCTCTC  962

Query  963  CAAGGAAAATCAAGTCATTGTTCGCATGCGGGGGCTCCCTTTCACGGCCACAGCTGAAGAAGTGGTGGCCTTCT  1036
            |||||||||.||||||||.||.||||||.||||||||||||||||||||||.||||||||||||||||||||||
Sbjct  963  CAAGGAAAACCAAGTCATCGTGCGCATGAGGGGGCTCCCTTTCACGGCCACGGCTGAAGAAGTGGTGGCCTTCT  1036

Query 1037  TTGGACAGCATTGCCCTATTACTGGGGGAAAGGAAGGCATCCTCTTTGTCACCTACCCAGATGGTAGGCCAACA  1110
            ||||||||||.|||||.||.|||||.||.|||||||||||||||||.||.|||||||||||||||||||||||.
Sbjct 1037  TTGGACAGCACTGCCCCATCACTGGAGGGAAGGAAGGCATCCTCTTCGTTACCTACCCAGATGGTAGGCCAACC  1110

Query 1111  GGGGACGCTTTTGTCCTCTTTGCCTGTGAGGAATATGCACAGAATGCGTTGAGGAAGCATAAAGACTTGTTGGG  1184
            ||.||.||||||||.||||||||.||||||||.|||||.|||||.||..||||||||||.||.||.|||.||||
Sbjct 1111  GGAGATGCTTTTGTGCTCTTTGCTTGTGAGGAGTATGCTCAGAACGCCCTGAGGAAGCACAAGGAGTTGCTGGG  1184

Query 1185  TAAAAGATACATTGAACTCTTCAGGAGCACAGCAGCTGAAGTTCAGCAGGTGCTGAATCGATTCTCCTCGGCCC  1258
            ||||||||||||.||.|||||||||||||||||.||.||||||||||||||||||||.|||||||||||.||||
Sbjct 1185  TAAAAGATACATCGAGCTCTTCAGGAGCACAGCTGCCGAAGTTCAGCAGGTGCTGAACCGATTCTCCTCAGCCC  1258

Query 1259  CTCTCATTCCACTTCCAACCCCTCCCATTATTCCAGTACTACCTCAGCAATTTGTGCCCCCTACAAATGTTAGA  1332
            ||||.||||||||||||||||||||||||||.||.||||||||||||||.||||||||.||.||.|||||.|||
Sbjct 1259  CTCTGATTCCACTTCCAACCCCTCCCATTATCCCTGTACTACCTCAGCAGTTTGTGCCTCCCACGAATGTCAGA  1332

Query 1333  GACTGTATACGCCTTCGAGGTCTTCCCTATGCAGCCACAATTGAGGACATCCTGGATTTCCTGGGGGAGTTCGC  1406
            |||||.|||||.||.|||||||||||||||||.||||||||.||.|||||.|||||.||||||||||||||..|
Sbjct 1333  GACTGCATACGTCTGCGAGGTCTTCCCTATGCTGCCACAATAGAAGACATTCTGGACTTCCTGGGGGAGTTTTC  1406

Query 1407  CACAGATATTCGTACTCATGGGGTTCACATGGTTTTGAATCACCAGGGCCGCCCATCAGGAGATGCCTTTATCC  1480
            |||||||||||||||.|||||.||.||||||||.||||||||||||                            
Sbjct 1407  CACAGATATTCGTACACATGGAGTGCACATGGTATTGAATCACCAG----------------------------  1452

Query 1481  AGATGAAGTCTGCGGACAGAGCATTTATGGCTGCACAGAAGTGTCATAAAAAAAACATGAAGGACAGATATGTT  1554
                                                                                      
Sbjct 1453  --------------------------------------------------------------------------  1452

Query 1555  GAAGTCTTTCAGTGTTCAGCTGAGGAGATGAACTTTGTGTTAATGGGGGGCACTTTAAATCGAAATGGCTTATC  1628
                                                                                      
Sbjct 1453  --------------------------------------------------------------------------  1452

Query 1629  CCCACCGCCATGTAAGTTACCATGCCTGTCTCCTCCCTCCTACACATTTCCAGCTC---CTGCTGCAGTTATTC  1699
                                   |||||||||||||||||||||||||.|||||||   |.||||         
Sbjct 1453  -----------------------GCCTGTCTCCTCCCTCCTACACATTCCCAGCTCCCACGGCTG---------  1494

Query 1700  CTACAGAAGCTGCCATTTACCAGCCCTCTGTGATTTTGAATCCACGAGCACTGCAGCCCTCCACAGCGTACTAC  1773
                                                                                      
Sbjct 1495  --------------------------------------------------------------------------  1494

Query 1774  CCAGCAGGCACTCAGCTCTTCATGAACTACACAGCGTACTATCCCAGCCCCCCAGGTTCGCCTAATAGTCTTGG  1847
                                                                                      
Sbjct 1495  --------------------------------------------------------------------------  1494

Query 1848  CTACTTCCCTACAGCTGCTAATCTTAGCGGTGTCCCTCCACAGCCTGGCACGGTGGTCAGAATGCAGGGCCTGG  1921
                                                                                      
Sbjct 1495  --------------------------------------------------------------------------  1494

Query 1922  CCTACAATACTGGAGTTAAGGAAATTCTTAACTTCTTCCAAGGTTACCAGTATGCAACCGAGGATGGACTTATA  1995
                                                                                      
Sbjct 1495  --------------------------------------------------------------------------  1494

Query 1996  CACACAAATGACCAGGCCAGGACTCTACCCAAAGAATGGGTTTGTATT  2043
                                                            
Sbjct 1495  ------------------------------------------------  1494