Nucleotide Global Alignment

Description

• Query: ccsbBroad304_08437
• Subject: NM_001110100.2
• Aligned Length: 1652
• Identities: 1218
• Gaps: 262

Alignment

Query    1  ATGATGTCGGAACACGACCTGGCCGATGTGGTTCAGATTGCAGTGGAAGACCTGAGCCCTGACCACCCAGTTGT  74
            ||||||||.||.||.||||||||.||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct    1  ATGATGTCAGAGCAGGACCTGGCGGATGTGGTTCAGATTGCAGTGGAAGACCTGAGCCCTGATCACCCAGTTGT  74

Query   75  TTTGGAGAATCATGTAGTGACAGATGAAGACGAACCTGCTTTGAAACGCCAGCGACTAGAAATCAATTGCCAGG  148
            |||||||||||||||.|||||||||||.||.||||||||.|||||.||||||||||||||.|||||||||||||
Sbjct   75  TTTGGAGAATCATGTCGTGACAGATGATGATGAACCTGCCTTGAAGCGCCAGCGACTAGAGATCAATTGCCAGG  148

Query  149  ATCCATCTATAAAGTCATTCCTGTATTCCATCAACCAGACAATCTGCTTGCGGTTGGATAGCATTGAAGCCAAA  222
            |.||.|||||||||||.||||||||.||.||.||||||||.||.||.||||||||||||||||||||.|||||.
Sbjct  149  ACCCCTCTATAAAGTCTTTCCTGTACTCTATTAACCAGACGATATGTTTGCGGTTGGATAGCATTGAGGCCAAG  222

Query  223  TTGCAAGCCCTGGAGGCTACTTGTAAATCCTTAGAAGAAAAGCTGGATCTGGTCACGAACAAGCAGCACAGCCC  296
            .|||||||.||.|||||.|||||.|||||..|.|||||.|||||.||.||||||||.||.||.||||||||.||
Sbjct  223  CTGCAAGCTCTCGAGGCCACTTGCAAATCTCTGGAAGAGAAGCTAGACCTGGTCACCAATAAACAGCACAGTCC  296

Query  297  CATCCAGGTCCCCATGGTGGCCGGCTCCCCTCTCGGGGCAACCCAGACGTGCAACAAAGTGCGATG--------  362
            |||||||||||||||||||||.||.|||||.||.||.||.||||||||.|||||||||||||||||        
Sbjct  297  CATCCAGGTCCCCATGGTGGCAGGTTCCCCACTTGGCGCCACCCAGACCTGCAACAAAGTGCGATGCGTCGTCC  370

Query  363  --------------------------------------------------------------------------  362
                                                                                      
Sbjct  371  CCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCCATTGTAGCCAAGATGGAAGACCCATTGAGCAAC  444

Query  363  -----------------------------------CGCTGTGCCTGGGCGTCGGCAGAACACCATTGTGGTGAA  401
                                               ||||||.|||||||||||||||||||||||.||||||||
Sbjct  445  AGGGCACCGGATTCCCTGGAAAATATCATTAGCAACGCTGTTCCTGGGCGTCGGCAGAACACCATCGTGGTGAA  518

Query  402  GGTGCCGGGCCAAGAAGACAGCCACCACGAGGACGGGGAGAGCGGCTCGGAGGCCAGCGACTCTGTGTCCAGCT  475
            .|||||.||.||.||.|||||||||.||||.||.|||||||||||.||.||||||||.|||||.|||||.|.||
Sbjct  519  AGTGCCTGGTCAGGACGACAGCCACAACGAAGATGGGGAGAGCGGGTCAGAGGCCAGTGACTCCGTGTCTAACT  592

Query  476  GTGGGCAGGCGGGCAGTCAGAGCATCGGGAGCAACGTCACGCTCATCACCCTGAACTCGGAAGAGGACTACCCC  549
            ||||.|||.|.||.||.||||.|||.||.|||||||||||.|||||||||||||||||.|||||||||||.|||
Sbjct  593  GTGGCCAGCCAGGAAGCCAGAACATTGGAAGCAACGTCACACTCATCACCCTGAACTCCGAAGAGGACTATCCC  666

Query  550  AATGGCACCTGGCTGGGCGACGAGAACAACCCCGAGATGCGGGTACGCTGCGCCATCATCCCCTCCGACATGCT  623
            ||||||||||||||||||||.|||||.|||||.|||||||||||||||||.|||||||||||.|||||||||.|
Sbjct  667  AATGGCACCTGGCTGGGCGATGAGAATAACCCTGAGATGCGGGTACGCTGTGCCATCATCCCTTCCGACATGTT  740

Query  624  GCACATCAGCACCAACTGCCGCACGGCTGAGAAGATGGCGCTAACGCTGCTGGACTACCTCTTCCACCGCGAGG  697
            ||||||||||||||||||.||||||||.||||||||||||||.||.||||||||||||||.||||||||.||||
Sbjct  741  GCACATCAGCACCAACTGTCGCACGGCCGAGAAGATGGCGCTGACACTGCTGGACTACCTGTTCCACCGTGAGG  814

Query  698  TGCAGGCTGTGTCCAACCTCTCGGGGCAGGGCAAGCACGGGAAGAAGCAGCTGGACCCGCTCACCATCTACGGC  771
            |||||||||||||||||.|.||.||.||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct  815  TGCAGGCTGTGTCCAACTTGTCCGGCCAGGGCAAGCACGGGAAGAAGCAGCTGGACCCCCTCACCATCTACGGC  888

Query  772  ATCCGGTGTCACCTTTTCTATAAATTTGGCATCACAGAATCCGACTGGTACCGAATCAAGCAGAGCATCGACTC  845
            ||||||||||||||.||||||||||||||.|||||.|||||.||||||||.||.||||||||||||||.|||||
Sbjct  889  ATCCGGTGTCACCTCTTCTATAAATTTGGAATCACGGAATCTGACTGGTATCGGATCAAGCAGAGCATTGACTC  962

Query  846  CAAGTGCCGCACGGCGTGGCGGCGCAAGCAGCGGGGCCAGAGCCTGGCGGTCAAGAGCTTCTCGCGGAGAACGC  919
            |||||||||.||.||.||||||||.||||||||.|||||||||||||||||||||||||||||.|||||.||||
Sbjct  963  CAAGTGCCGGACAGCCTGGCGGCGGAAGCAGCGAGGCCAGAGCCTGGCGGTCAAGAGCTTCTCTCGGAGGACGC  1036

Query  920  CCAACTCGTCCTCCTAC--TGCCCTTCAGAGCCGATGATGAGCACCCCACCTCCTGCCAGCGAGCTCCCGCAGC  991
            |...|||.|||||.|||  ||||  ||||||.|.||||||.|.|||||.|||||..||||.|||||.|.||||.
Sbjct 1037  CATCCTCATCCTCTTACAGTGCC--TCAGAGACCATGATGGGAACCCCTCCTCCCACCAGTGAGCTACAGCAGT  1108

Query  992  CACAGCCGCAGCCGCAGGCCCTGCACTACGCGCTGGCCAACGCACAGCAGGTGCAGATCCACCAGATCGGAGAA  1065
            ||      |||||.||||||||.||||||||.|||||||||||.||||||||.||||||||||||||.||.||.
Sbjct 1109  CA------CAGCCACAGGCCCTACACTACGCCCTGGCCAACGCCCAGCAGGTCCAGATCCACCAGATTGGGGAG  1176

Query 1066  GACGGACAGGTGCAAGTAATCCCACAGGGACACCTCCACATCGCCCAGGTGCCGCAGGGGGAGCAAGTCCAGAT  1139
            ||.|||||||||||||||         ||.|||||||||||.|||||||||||.||.||||||||.||.|||||
Sbjct 1177  GATGGACAGGTGCAAGTA---------GGCCACCTCCACATTGCCCAGGTGCCTCAAGGGGAGCAGGTGCAGAT  1241

Query 1140  CACGCAGGACAGCGAGGGCAACCTCCAGATCCATCACGTGGGGCAGGA--------------------------  1187
            |||.|||||||||||||||||.||.|||||||||||.|||||.|||||                          
Sbjct 1242  CACACAGGACAGCGAGGGCAATCTGCAGATCCATCATGTGGGTCAGGATGGCCAGTCGTGGGGCCTGTGCCAGA  1315

Query 1188  ----------------CGGT------------------------------------------------------  1191
                            ||||                                                      
Sbjct 1316  ATCCCATTCCTGTCAGCGGTGACTCAGTGGCCCAGGCTAATCCCTCCCAGCTTTGGCCTCTGGGAGGAGACACA  1389

Query 1192  ------------------------------CAGGTGCTGCAGGGTGCACAGCTGATCGCCGTGGCCTCCTCGGA  1235
                                          |||||.|||||||||||.|||||.||.|||||||||||.||.||
Sbjct 1390  CTTGATCTGCCTGCTGGAAATGAAATGATCCAGGTACTGCAGGGTGCTCAGCTCATAGCCGTGGCCTCTTCAGA  1463

Query 1236  CCCCGCGGCGGCGGGCGTGGATGGGTCGCCACTCCAGGGCAGCGACATCCAGGTTCAGTACGTGCAGCTGGCGC  1309
            |||.||.||..|.||.||.|||||||||||.|||||||||||.|||||.|||||||||||.||.||||||||||
Sbjct 1464  CCCTGCTGCTACAGGAGTAGATGGGTCGCCTCTCCAGGGCAGTGACATTCAGGTTCAGTATGTCCAGCTGGCGC  1537

Query 1310  CAGTGAGTGACCACACGGCCGGGGCACAGACGGCCGAAGCCCTGCAGCCCACGCTACAGCCGGAGATGCAGCTC  1383
            |.||||||||||||||.||||..||.|||||.||.||.||||||||||||||.||.|||||.||.||||||||.
Sbjct 1538  CTGTGAGTGACCACACAGCCGCAGCGCAGACCGCAGAGGCCCTGCAGCCCACTCTGCAGCCCGACATGCAGCTT  1611

Query 1384  GAGCACGGGGCCATCCAGATTCAG  1407
            ||.||.||||||||||||||.|||
Sbjct 1612  GAACATGGGGCCATCCAGATCCAG  1635