Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08437
Subject:
NM_001173539.2
Aligned Length:
1524
Identities:
1396
Gaps:
126

Alignment

Query    1  ATGATGTCGGAACACGACCTGGCCGATGTGGTTCAGATTGCAGTGGAAGACCTGAGCCCTGACCACCCAGTTGT  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGATGTCGGAACACGACCTGGCCGATGTGGTTCAGATTGCAGTGGAAGACCTGAGCCCTGACCACCCAGTTGT  74

Query   75  TTTGGAGAATCATGTAGTGACAGATGAAGACGAACCTGCTTTGAAACGCCAGCGACTAGAAATCAATTGCCAGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TTTGGAGAATCATGTAGTGACAGATGAAGACGAACCTGCTTTGAAACGCCAGCGACTAGAAATCAATTGCCAGG  148

Query  149  ATCCATCTATAAAGTCATTCCTGTATTCCATCAACCAGACAATCTGCTTGCGGTTGGATAGCATTGAAGCCAAA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ATCCATCTATAAAGTCATTCCTGTATTCCATCAACCAGACAATCTGCTTGCGGTTGGATAGCATTGAAGCCAAA  222

Query  223  TTGCAAGCCCTGGAGGCTACTTGTAAATCCTTAGAAGAAAAGCTGGATCTGGTCACGAACAAGCAGCACAGCCC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TTGCAAGCCCTGGAGGCTACTTGTAAATCCTTAGAAGAAAAGCTGGATCTGGTCACGAACAAGCAGCACAGCCC  296

Query  297  CATCCAGGTCCCCATGGTGGCCGGCTCCCCTCTCGGGGCAACCCAGACGTGCAACAAAGTGCGATG--------  362
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
Sbjct  297  CATCCAGGTCCCCATGGTGGCCGGCTCCCCTCTCGGGGCAACCCAGACGTGCAACAAAGTGCGATGCGTCGTCC  370

Query  363  --------------------------------------------------------------------------  362
                                                                                      
Sbjct  371  CCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCCATTGTAGCCAAGATGGAAGACCCCTTGAGCAAC  444

Query  363  -----------------------------------CGCTGTGCCTGGGCGTCGGCAGAACACCATTGTGGTGAA  401
                                               |||||||||||||||||||||||||||||||||||||||
Sbjct  445  AGGGCACCGGATTCCCTGGAAAATGTCATTAGCAACGCTGTGCCTGGGCGTCGGCAGAACACCATTGTGGTGAA  518

Query  402  GGTGCCGGGCCAAGAAGACAGCCACCACGAGGACGGGGAGAGCGGCTCGGAGGCCAGCGACTCTGTGTCCAGCT  475
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GGTGCCGGGCCAAGAAGACAGCCACCACGAGGACGGGGAGAGCGGCTCGGAGGCCAGCGACTCTGTGTCCAGCT  592

Query  476  GTGGGCAGGCGGGCAGTCAGAGCATCGGGAGCAACGTCACGCTCATCACCCTGAACTCGGAAGAGGACTACCCC  549
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GTGGGCAGGCGGGCAGTCAGAGCATCGGGAGCAACGTCACGCTCATCACCCTGAACTCGGAAGAGGACTACCCC  666

Query  550  AATGGCACCTGGCTGGGCGACGAGAACAACCCCGAGATGCGGGTACGCTGCGCCATCATCCCCTCCGACATGCT  623
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AATGGCACCTGGCTGGGCGACGAGAACAACCCCGAGATGCGGGTACGCTGCGCCATCATCCCCTCCGACATGCT  740

Query  624  GCACATCAGCACCAACTGCCGCACGGCTGAGAAGATGGCGCTAACGCTGCTGGACTACCTCTTCCACCGCGAGG  697
            |||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct  741  GCACATCAGCACCAACTGCCGCACGGCCGAGAAGATGGCGCTCACGCTGCTGGACTACCTCTTCCACCGCGAGG  814

Query  698  TGCAGGCTGTGTCCAACCTCTCGGGGCAGGGCAAGCACGGGAAGAAGCAGCTGGACCCGCTCACCATCTACGGC  771
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TGCAGGCTGTGTCCAACCTCTCGGGGCAGGGCAAGCACGGGAAGAAGCAGCTGGACCCGCTCACCATCTACGGC  888

Query  772  ATCCGGTGTCACCTTTTCTATAAATTTGGCATCACAGAATCCGACTGGTACCGAATCAAGCAGAGCATCGACTC  845
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  ATCCGGTGTCACCTTTTCTATAAATTTGGCATCACAGAATCCGACTGGTACCGAATCAAGCAGAGCATCGACTC  962

Query  846  CAAGTGCCGCACGGCGTGGCGGCGCAAGCAGCGGGGCCAGAGCCTGGCGGTCAAGAGCTTCTCGCGGAGAACGC  919
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CAAGTGCCGCACGGCGTGGCGGCGCAAGCAGCGGGGCCAGAGCCTGGCGGTCAAGAGCTTCTCGCGGAGAACGC  1036

Query  920  CCAACTCGTCCTCCTACTGCCCTTCAGAGCCGATGATGAGCACCCCACCTCCTGCCAGCGAGCTCCCGCAGCCA  993
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CCAACTCGTCCTCCTACTGCCCTTCAGAGCCGATGATGAGCACCCCACCTCCTGCCAGCGAGCTCCCGCAGCCA  1110

Query  994  CAGCCGCAGCCGCAGGCCCTGCACTACGCGCTGGCCAACGCACAGCAGGTGCAGATCCACCAGATCGGAGAAGA  1067
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CAGCCGCAGCCGCAGGCCCTGCACTACGCGCTGGCCAACGCACAGCAGGTGCAGATCCACCAGATCGGAGAAGA  1184

Query 1068  CGGACAGGTGCAAGTAATCCCACAGGGACACCTCCACATCGCCCAGGTGCCGCAGGGGGAGCAAGTCCAGATCA  1141
            ||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CGGACAGGTGCAAGTA---------GGACACCTCCACATCGCCCAGGTGCCGCAGGGGGAGCAAGTCCAGATCA  1249

Query 1142  CGCAGGACAGCGAGGGCAACCTCCAGATCCATCACGTGGGGCAGGACGGTCAGGTGCTGCAGGGTGCACAGCTG  1215
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1250  CGCAGGACAGCGAGGGCAACCTCCAGATCCATCACGTGGGGCAGGACGGTCAGGTGCTGCAGGGTGCACAGCTG  1323

Query 1216  ATCGCCGTGGCCTCCTCGGACCCCGCGGCGGCGGGCGTGGATGGGTCGCCACTCCAGGGCAGCGACATCCAGGT  1289
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1324  ATCGCCGTGGCCTCCTCGGACCCCGCGGCGGCGGGCGTGGATGGGTCGCCACTCCAGGGCAGCGACATCCAGGT  1397

Query 1290  TCAGTACGTGCAGCTGGCGCCAGTGAGTGACCACACGGCCGGGGCACAGACGGCCGAAGCCCTGCAGCCCACGC  1363
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1398  TCAGTACGTGCAGCTGGCGCCAGTGAGTGACCACACGGCCGGGGCACAGACGGCCGAAGCCCTGCAGCCCACGC  1471

Query 1364  TACAGCCGGAGATGCAGCTCGAGCACGGGGCCATCCAGATTCAG  1407
            ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1472  TACAGCCGGAGATGCAGCTCGAGCACGGGGCCATCCAGATTCAG  1515

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