Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08453
Subject:
NR_130972.1
Aligned Length:
1966
Identities:
1093
Gaps:
872

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CACGATGCACCGCGCCAGCCCCGACCGACGGACGAGACTGACCCGGACTTAGGCGTTCCGCCTGGCCCGGCGGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAGGAAAAAAGGCAGTTTTGAAGCATTTAGTGGCAAAAGGGGTAGGAGACGGCTGCTGAAGTGTCTACTACATT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGGGGACCTGGAAGGCTTCCAGATATCCGCAATGAACAATGAAAAGAAATTGTGAAAGAAGGCGCTTCCCTCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGCCGGAACTAATGAACTCCTGGGTCACGTGGTGCGCACGCGCCAAAGGCACACGATAAAGGAAAACGCGGGCT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TATCGTGGCCTTTAAAATCCGGCTTGCCAAGACTTCCGCCCTCGATCAAGATGGTGGTTGGACGGCCTTCCTAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CCTTTACGGGGCCTGGCGGTGCTGACGCCTGAGCTGGTAGGGGTGGAGCAGGTAGGAAACAGCAAATGCAGAAG  444

Query    1  --------------------ATGGACTGGAAAGAAGTTCTTCGTCGGCGCCTAGCGACGCCCAACACCTGTCCA  54
                                ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CTGCTGCGCGGAAGTCGGCCATGGACTGGAAAGAAGTTCTTCGTCGGCGCCTAGCGACGCCCAACACCTGTCCA  518

Query   55  AACAAAAAAAAAAGTGAACAAGAATTAAAAGATGAAGAAATGGATTTATTTACAAAATATTACTCCGAATGGAA  128
            ||||                                                                      
Sbjct  519  AACA----------------------------------------------------------------------  522

Query  129  AGGAGGTAGAAAAAACACAAATGAATTCTATAAGACCATTCCCCGGTTTTATTATAGGCTGCCTGCTGAAGATG  202
                                                                      ||||||||||||||||
Sbjct  523  ----------------------------------------------------------CTGCCTGCTGAAGATG  538

Query  203  AAGTCTTACTACAGAAATTAAGAGAGGAATCAAGAGCTGTCTTTCTACAAAGAAAAAGCAGAGAACTGTTAGAT  276
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  539  AAGTCTTACTACAGAAATTAAGAGAGGAATCAAGAGCTGTCTTTCTACAAAGAAAAAGCAGAGAACTGTTAGAT  612

Query  277  AATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGAT  350
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  613  AATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGAT  686

Query  351  GATCAATTACGAAAACTTTTTGAAGGTTGGTGAAAAGGCTGGAGCAAAGTGCAAGCAATTTTTCACAGCAAAAG  424
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  687  GATCAATTACGAAAACTTTTTGAAGGTTGGTGAAAAGGCTGGAGCAAAGTGCAAGCAATTTTTCACAGCAAAAG  760

Query  425  TCTTTGCTAAACTCCTTCATACAGATTCATATGGAAGAATTTCCATCATGCAGTTCTTTAATTATGTCATGAGA  498
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  761  TCTTTGCTAAACTCCTTCATACAGATTCATATGGAAGAATTTCCATCATGCAGTTCTTTAATTATGTCATGAGA  834

Query  499  AAAGTTTGGCTTCATCAAACAAGAATAGGACTCAGTTTATATGATGTCGCTGGGCAGGGGTACCTTCGGGAATC  572
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  835  AAAGTTTGGCTTCATCAAACAAGAATAGGACTCAGTTTATATGATGTCGCTGGGCAGGGGTACCTTCGGGAATC  908

Query  573  TGATTTAGAAAACTACATATTGGAACTTATCCCTACGTTGCCACAATTAGATGGTCTGGAAAAATCTTTCTACT  646
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  909  TGATTTAGAAAACTACATATTGGAACTTATCCCTACGTTGCCACAATTAGATGGTCTGGAAAAATCTTTCTACT  982

Query  647  CCTTTTATGTTTGTACAGCAGTTAGGAAGTTCTTCTTCTTTTTAGATCCTTTAAGAACAGGAAAGATAAAAATT  720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  983  CCTTTTATGTTTGTACAGCAGTTAGGAAGTTCTTCTTCTTTTTAGATCCTTTAAGAACAGGAAAGATAAAAATT  1056

Query  721  CAAGATATTTTAGCATGCAGCTTCCTAGATGATTTATTGGAGCTAAGGGATGAGGAACTGTCCAAGGAGAGTCA  794
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1057  CAAGATATTTTAGCATGCAGCTTCCTAGATGATTTATTGGAGCTAAGGGATGAGGAACTGTCCAAGGAGAGTCA  1130

Query  795  AGAAACAAATTGGTTTTCTGCTCCTTCTGCCCTAAGAGTTTATGGCCAGTACTTGAATCTTGATAAAGATCACA  868
            |||||||||||||||||||||||||||||||||||||||||                                 
Sbjct 1131  AGAAACAAATTGGTTTTCTGCTCCTTCTGCCCTAAGAGTTT---------------------------------  1171

Query  869  ATGGCATGCTCAGTAAAGAAGAACTCTCACGCTATGGAACAGCTACCATGACCAATGTCTTCTTAGACCGTGTT  942
                                                                                      
Sbjct 1172  --------------------------------------------------------------------------  1171

Query  943  TTCCAGGAGTGTCTCACTTATGATGGAGAAATGGACTATAAGACCTACTTGGACTTTGTCCTTGCATTAGAAAA  1016
                                          ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1172  ------------------------------ATGGACTATAAGACCTACTTGGACTTTGTCCTTGCATTAGAAAA  1215

Query 1017  CAGAAAGGAACCTGCAGCTCTACAATATATTTTCAAACTGCTTGATATTGAGAACAAAGGATACCTGAATGTCT  1090
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1216  CAGAAAGGAACCTGCAGCTCTACAATATATTTTCAAACTGCTTGATATTGAGAACAAAGGATACCTGAATGTCT  1289

Query 1091  TTTCACTTAATTATTTCTTTAGGGCCATACAGGAACTAATGAAAATCCATGGACAAGATCCTGTTTCATTTCAA  1164
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1290  TTTCACTTAATTATTTCTTTAGGGCCATACAGGAACTAATGAAAATCCATGGACAAGATCCTGTTTCATTTCAA  1363

Query 1165  GATGTCAAGGATGAAATCTTTGACATGGTAAAACCAAAGGATCCTTTGAAAATCTCTCTTCAGGATTTAATCAA  1238
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1364  GATGTCAAGGATGAAATCTTTGACATGGTAAAACCAAAGGATCCTTTGAAAATCTCTCTTCAGGATTTAATCAA  1437

Query 1239  CAGTAATCAAGGAGACACAGTAACCACCATTCTAATCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGG  1312
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1438  CAGTAATCAAGGAGACACAGTAACCACCATTCTAATCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGG  1511

Query 1313  CTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTNGATGATACA---------------------------  1359
            |||||||||||||||||||||||||||||||||||||.|||||||||                           
Sbjct 1512  CTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACTAGACTGTCTTA  1585

Query 1360  --------------------------------------------------------------------------  1359
                                                                                      
Sbjct 1586  TATTATGAGATACTTGAATGCTGCATGTAAAGCCTTTAAAGCAAAATCCTCAGAAATGGTCTAAATAAAACACT  1659

Query 1360  ------------------------------------------  1359
                                                      
Sbjct 1660  TGATATGCCTAGAGAACACAGCAAAAAAAAAAAAAAAAAAAA  1701

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