Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08453
- Subject:
- XR_002957558.1
- Aligned Length:
- 1922
- Identities:
- 1221
- Gaps:
- 700
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACGATGCACCGCGCCAGCCCCGACCGACGGACGAGACTGACCCGGACTTAGGCGTTCCGCCTGGCCCGGCGGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGAAAAAAGGCAGTTTTGAAGCATTTAGTGGCAAAAGGGGTAGGAGACGGCTGCTGAAGTGTCTACTACATTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGGGACCTGGAAGGCTTCCAGATATCCGCAATGAACAATGAAAAGAAATTGTGAAAGAAGGCGCTTCCCTCAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCGGAACTAATGAACTCCTGGGTCACGTGGTGCGCACGCGCCAAAGGCACACGATAAAGGAAAACGCGGGCTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATCGTGGCCTTTAAAATCCGGCTTGCCAAGACTTCCGCCCTCGATCAAGATGGTGGTTGGACGGCCTTCCTAAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTTTACGGGGCCTGGCGGTGCTGACGCCTGAGCTGGTAGGGGTGGAGCAGGTAGGAAACAGCAAATGCAGAAGC 444
Query 1 -------------------ATGGACTGGAAAGAAGTTCTTCGTCGGCGCCTAGCGACGCCCAACACCTGTCCAA 55
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TGCTGCGCGGAAGTCGGCCATGGACTGGAAAGAAGTTCTTCGTCGGCGCCTAGCGACGCCCAACACCTGTCCAA 518
Query 56 ACAAAAAAAAAAGTGAACAAGAATTAAAAGATGAAGAAATGGATTTATTTACAAAATATTACTCCGAATGGAAA 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ACAAAAAAAAAAGTGAACAAGAATTAAAAGATGAAGAAATGGATTTATTTACAAAATATTACTCCGAATGGAAA 592
Query 130 GGAGGTAGAAAAAACACAAATGAATTCTATAAGACCATTCCCCGGTTTTATTATAGGCTGCCTGCTGAAGATGA 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GGAGGTAGAAAAAACACAAATGAATTCTATAAGACCATTCCCCGGTTTTATTATAGGCTGCCTGCTGAAGATGA 666
Query 204 AGTCTTACTACAGAAATTAAGAGAGGAATCAAGAGCTGTCTTTCTACAAAGAAAAAGCAGAGAACTGTTAGATA 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGTCTTACTACAGAAATTAAGAGAGGAATCAAGAGCTGTCTTTCTACAAAGAAAAAGCAGAGAACTGTTAGATA 740
Query 278 ATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGATG 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGATG 814
Query 352 ATCAATTACGAAAACTTTTTGAAGGTTGGTGAAAAGGCTGGAGCAAAGTGCAAGCAATTTTTCACAGCAAAAGT 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ATCAATTACGAAAACTTTTTGAAGGTTGGTGAAAAGGCTGGAGCAAAGTGCAAGCAATTTTTCACAGCAAAAGT 888
Query 426 CTTTGCTAAACTCCTTCATACAGATTCATATGGAAGAATTTCCATCATGCAGTTCTTTAATTATGTCATGAGAA 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTTTGCTAAACTCCTTCATACAGATTCATATGGAAGAATTTCCATCATGCAGTTCTTTAATTATGTCATGAGAA 962
Query 500 AAGTTTGGCTTCATCAAACAAGAATAGGACTCAGTTTATATGATGTCGCTGGGCAGGGGTACCTTCGGGAATCT 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AAGTTTGGCTTCATCAAACAAGAATAGGACTCAGTTTATATGATGTCGCTGGGCAGGGGTACCTTCGGGAATCT 1036
Query 574 GATTTAGAAAACTACATATTGGAACTTATCCCTACGTTGCCACAATTAGATGGTCTGGAAAAATCTTTCTACTC 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GATTTAGAAAACTACATATTGGAACTTATCCCTACGTTGCCACAATTAGATGGTCTGGAAAAATCTTTCTACTC 1110
Query 648 CTTTTATGTTTGTACAGCAGTTAGGAAGTTCTTCTTCTTTTTAGATCCTTTAAGAACAGGAAAGATAAAAATTC 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CTTTTATGTTTGTACAGCAGTTAGGAAGTTCTTCTTCTTTTTAGATCCTTTAAGAACAGGAAAGATAAAAATTC 1184
Query 722 AAGATATTTTAGCATGCAGCTTCCTAGATGATTTATTGGAGCTAAGGGATGAGGAACTGTCCAAGGAGAGTCAA 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AAGATATTTTAGCATGCAGCTTCCTAGATGATTTATTGGAGCTAAGGGATGAGGAACTGTCCAAGGAGAGTCAA 1258
Query 796 GAAACAAATTGGTTTTCTGCTCCTTCTGCCCTAAGAGTTTATGGCCAGTACTTGAATCTTGATAAAGATCACAA 869
||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GAAACAAATTGGTTTTCTGCTCCTTCTGCCCTAAGAGTTT---------------------------------- 1298
Query 870 TGGCATGCTCAGTAAAGAAGAACTCTCACGCTATGGAACAGCTACCATGACCAATGTCTTCTTAGACCGTGTTT 943
Sbjct 1299 -------------------------------------------------------------------------- 1298
Query 944 TCCAGGAGTGTCTCACTTATGATGGAGAAATGGACTATAAGACCTACTTGGACTTTGTCCTTGCATTAGAAAAC 1017
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1299 -----------------------------ATGGACTATAAGACCTACTTGGACTTTGTCCTTGCATTAGAAAAC 1343
Query 1018 AGAAAGGAACCTGCAGCTCTACAATATATTTTCAAACTGCTTGATATTGAGAACAAAGGATACCTGAATGTCTT 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1344 AGAAAGGAACCTGCAGCTCTACAATATATTTTCAAACTGCTTGATATTGAGAACAAAGGATACCTGAATGTCTT 1417
Query 1092 TTCACTTAATTATTTCTTTAGGGCCATACAGGAACTAATGAAAATCCATGGACAAGATCCTGTTTCATTTCAAG 1165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1418 TTCACTTAATTATTTCTTTAGGGCCATACAGGAACTAATGAAAATCCATGGACAAGATCCTGTTTCATTTCAAG 1491
Query 1166 ATGTCAAGGATGAAATCTTTGACATGGTAAAACCAAAGGATCCTTTGAAAATCTCTCTTCAGGATTTAATCAAC 1239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1492 ATGTCAAGGATGAAATCTTTGACATGGTAAAACCAAAGGATCCTTTGAAAATCTCTCTTCAGGATTTAATCAAC 1565
Query 1240 AGTAATCAAGGAGACACAGTAACCACCATTCTAATCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGGC 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1566 AGTAATCAAGGAGACACAGTAACCACCATTCTAATCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGGC 1639
Query 1314 TCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTNGATGATACA---------------------------- 1359
||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 1640 TCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACTAGACTGTCTTAT 1713
Query 1360 ------------------------------------------------------------------------ 1359
Sbjct 1714 ATTATGAGATACTTGAATGCTGCATGTAAAGCCTTTAAAGCAAAATCCTCAGAAATGGTCTAAATAAAACAC 1785
