Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08496
- Subject:
- NR_130761.2
- Aligned Length:
- 3628
- Identities:
- 474
- Gaps:
- 3154
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTTCCGGGGGCCAGGCGGCCGCCGCGAGTCTGGTATCCTGAGCTTCGTGAGTTGAGCGCTGCTGCTCCGCGGT 74
Query 1 --------------------------ATGGTGTTCTACTTCACCAGCAGCAGCGTTAATTCATCTGCCTACACT 48
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGAGTCACCGCACCGCTCCCGGGATCATGGTGTTCTACTTCACCAGCAGCAGCGTTAATTCATCTGCCTACACT 148
Query 49 ATTTACATGGGAAAAGATAAATATGAAAATGAAGATCTGATCAAGCATGGCTGGCCTGAAGATATCTGGTTTCA 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATTTACATGGGAAAAGATAAATATGAAAATGAAGATCTGATCAAGCATGGCTGGCCTGAAGATATCTGGTTTCA 222
Query 123 TGTGGACAAACTCTCTTCGGCTCATGTATACCTTCGATTACATAAGGGAGAGAATATAGAAGACATCCCAAAGG 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TGTGGACAAACTCTCTTCGGCTCATGTATACCTTCGATTACATAAGGGAGAGAATATAGAAGACATCCCAAAGG 296
Query 197 AAGTGCTGATGGACTGTGCCCACCTTGTGAAGGCCAATAGCATTCAAGGCTGCAAGATGAACAACGTTAATGTG 270
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AAGTGCTGATGGACTGTGCCCACCTTGTGAAGGCCAATAGCATTCAAG-------------------------- 344
Query 271 GTATATACGCCGTGGTCTAACCTGAAGAAAACAGCTGACATGGATGTGGGGCAGATAGGCTTTCACAGGCAGAA 344
Sbjct 345 -------------------------------------------------------------------------- 344
Query 345 GGATGTAAAAATTGTGACAGTGGAGAAGAAAGTAAATGAGATCCTGAACCGATTAGAAAAGACCAAAGTCGAGC 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 345 ----GTAAAAATTGTGACAGTGGAGAAGAAAGTAAATGAGATCCTGAACCGATTAGAAAAGACCAAAGTCGAGC 414
Query 419 GGTTCCCAGACCTAGCAGCAGAGAAAGAATGCAGAGATCGTGAAGAGAGGAATGAGAAAAAAGCCCAAATTCAG 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 415 GGTTCCCAGACCTAGCAGCAGAGAAAGAATGCAGAGATCGTGAAGAGAGGAATGAGAAAAAAGCCCAAATTCAG 488
Query 493 GAAATGAAAAAGAGAGAAAAAGAAGAAATGAAGAAGAAGAGGGAAATGGATGAACTTAGGAGCTATTCATCACT 566
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 489 GAAATGAAAAAGAGAGAAAAAGAAGAAATGAAGAAGAAGAGGGAAATGGATGAACTT----------------- 545
Query 567 AATGAAAGTTGAAAATATGTCTTCAAATCAGGATGGCAATGATTCAGATGAATTCAATG--------------- 625
|||||||||||||||||||||||||| |||
Sbjct 546 -----------------------------AGGATGGCAATGATTCAGATGAATTC-ATGTAAAAGGAGAAAAGG 589
Query 626 -------------------------------------------------------------------------- 625
Sbjct 590 AGAAAAGGACCTTTGAAAGATGTGAATGTAGAGACAATTGCAGACCTTTTGGTTTCATCTGTGTTCTGAAATAT 663
Query 626 -------------------------------------------------------------------------- 625
Sbjct 664 AAAATACAACCAAAATTCTACCTTCATCCTACCCAGAAATTATTGATTTTCAAGTTTTAAAAAAATTGTACCTT 737
Query 626 -------------------------------------------------------------------------- 625
Sbjct 738 TTTTGCTGACAGAAAAGGATCAGATATGTATAAAATAGTTGAACTTGACAGCATATAACTTAAAGTGAAAATGT 811
Query 626 -------------------------------------------------------------------------- 625
Sbjct 812 TTTTGCCAGAACATGTCTTGGTACCTTGTGAAAGCAGGCTGCCCTTGTTCTTGAGATAGACTTTAAAATGAACC 885
Query 626 -------------------------------------------------------------------------- 625
Sbjct 886 AGCTCTGAAAAGTACTTCTGCTGCTCTGGTCTATCCCTGAAAACAGATGTCTTGAAACACTTTTCATATTCTTA 959
Query 626 -------------------------------------------------------------------------- 625
Sbjct 960 AAATAATCTTCACTTCTGTTAAGAAGAACATGTTGGTGGGTAATTATGCGAATGTTTCCCTGTCCCTGATTTCT 1033
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1034 CGATTAGGCGTATGGGTTTTGAAAAAGAGATTTTTCAGAAGATTGTCAGCTTCAGTATTCATGTTCCATCGTGT 1107
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1108 CATCTGGGTCTGTTAGTGTAGTGACCCTCAGTGCAGTCTGTCCCAGCGTTTACGTCCTTGCTTCCTCTGAGCAG 1181
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1182 AGGCCTCCATCTTAGTATCAACATATTTAAAGAAATTGATGGTGTTCATCAAGCTGGGGCCTGTGGCAGTTGTT 1255
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1256 GCCTGAGCACCAAGTAACCCAAGCCACCTATGTGACAACTTCTGGGCCCAGGAGTAATTTCTCAGCATTGAGGG 1329
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1330 TAAAATAGGATGGAGTGCTCTGTTGATCATTTGGGAGATGTAGGTTACCTGATTTGTGCCTTAGGATGCAGCGT 1403
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1404 GAAGCAGAAGTCCATATTGCAATTATGATTTTAGAAGGAACTAAGCATTTTACTCACACCCACAGCAGCAAGAA 1477
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1478 TGACCTCCTGCAGCAGATATTCCACCTGTAATAGCACTTTGGAACTGTGGGCAAAACCAAAAGGCTAGTGTTTC 1551
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1552 CATTTATTCCATGTTGGTGTATGGGGTTGAACTGGAAAATTCCCTGAGGCAAAACTCACTGGCCAAATTTTGAG 1625
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1626 AGGGTATAGAAAATGACTTTAGAGATGAGTGGTTTTGTGTATGTGTCTGATGATATTCAGTCTGATGTTCCGCA 1699
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1700 ATTTTAAAAGTTATAATAAAATACCATTTTTTTAATCTGGAAGGACATTGATATATGAATTCTTAGAATTTGCT 1773
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1774 ATTAAAAAGGGTAGCCCCCATTCCACAAGCTGGTTTTGAGGGTGATCTTGCTCTAAAAAACCTCATTCATCATA 1847
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1848 GGCTCAGTCTGACAGGTTCTGTACGGGGCTATCATCTTTCTCCTCCTCTGCTAAATGCCTCTTTCTTCCAGCTG 1921
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1922 CTCACTGGGTCAAAGGGATGTCCTTTCTCAGATGTATTCTTGATACATCTCAGATGTATTCGTAGCTGTGCTCC 1995
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1996 TTCCATACTTCCAAGGAGTCCGGCTTCTACAGAATTCCTCTGTACCTCACACTGCAACACATGTAGATAGCGCT 2069
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2070 TTTGAAAAATACATATATTTTTACTATAGTATGAGAGGTCCTGGGGCTCAAACTTTAAACATTTCCTAACTCAG 2143
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2144 CTTACACTGGTTTAAAATGTCCAGGTCTCTGCTGAATTCTCTTGTTGAATTCATAGCTCTGTGTTGATTCCTAT 2217
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2218 GCCCCTAACCCTGCAGCCTCTTTGTTTTATTTTTTTCCCCATCTCTGTTGGTCCCAGGGAAAGCAAGGAAATTT 2291
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2292 TCTTTTGAGGACTTATAGGTTGATTGCCCACAGGTCAAACTGTTGGCATTGAACTCCTCTCATTTCTTGCCATT 2365
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2366 GGATTGTTTCCTAAACGTTGGATAGGAGAATTCGAAATTGTTGCTATTTTTATGAGCTGTGCCCTTGATCAAAT 2439
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2440 CTGTGCTGTGGGTCTGAGTCACTTTGCCAATGTCGTCTTCAGTTTCAACACTCTGATCAGCATGCAGGCGAGGG 2513
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2514 GCATGTTTAATTTACTTCACTAACTGCTATATTCTATAGCTTTAGACTTCATATTTCTTATCCACCTTTGTCTA 2587
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2588 GGCTCACGATCTTTGGGCAAGGGAGCTTTGTCACCGTGGTTGGGCTAGAACAAATATTGAGAAGTTTACCAACA 2661
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2662 CAGATGTTGAGAAGTTTATTGAAAGGCACTGACATTAGCAGAATAAGTGATGGACATTAGTTGAACCCCTTCAG 2735
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2736 TGTCTATGTGTTTTATTGTATTGTCTTTAACTCGTTCTTGAAGCACAGATTTCAGCGAGCCTTTCAGCTATTCA 2809
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2810 GTGCCAGCGGTTTTCCCCACTCAGGAAAGATGGTGTGAGCCATACACACAGCAGGATTAGACGGGGAGAGTTTC 2883
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2884 AGCTGCAGCTTCTAGTTTAAGACCAAAGCCCTTCCTCCCGCTGCTGCATCTGTCTGAGAGGGGAAGCTCTTGTT 2957
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2958 TTCCAAGCTGGAACCGTTTATGAGGAAAACTGAGCAGGGTGGCAAAATGGAAAAGGAACAATTTTCTAGTTTTT 3031
Query 626 -------------------------------------------------------------------------- 625
Sbjct 3032 CCTACGCGTGATATTGACGCGTGCTTTTTCTTTGATTTGAGGTACAGCATGTAAATAACAAATTTCCATATTCA 3105
Query 626 -------------------------------------------------------------------------- 625
Sbjct 3106 AAATGATCATATTAGAGTGACTGAGTGACCTTTTGATTTTGAAGCAGACTAAAATCTGACCAGACCACAATGAA 3179
Query 626 -------------------------------------------------------------------------- 625
Sbjct 3180 AAGTATAAAATTAGAAACTTAAATTCCAAGCTAAATTTCAGCTTTGACCCACCTAACTCCAGTGAATAGGTGGC 3253
Query 626 -------------------------------------------------------------------------- 625
Sbjct 3254 AGCTCAGAAACAAGGACAGCACTGCTGCTGCCAGAGCAAGCTCACATCCAGCTGGCACTTCGTGAGAGCTCCTT 3327
Query 626 -------------------------------------------------------------------------- 625
Sbjct 3328 CCTGCCGGGCACGTGTGAGTTCAGCGTGGGCAAGAGACTTTTATGCACATTCTGTCATTCAAAAGGGAAATGAT 3401
Query 626 -------------------------------------------------------------------------- 625
Sbjct 3402 GCCAACCCCAGATGCAGCATGTCCTGAATGAATGATCTGTAAAATACAATAATAAAAGCTTATAGTTTGAGTAG 3475
Query 626 -- 625
Sbjct 3476 AA 3477
