Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08496
- Subject:
- NR_130762.2
- Aligned Length:
- 3628
- Identities:
- 468
- Gaps:
- 3160
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTTCCGGGGGCCAGGCGGCCGCCGCGAGTCTGGTATCCTGAGCTTCGTGAGTTGAGCGCTGCTGCTCCGCGGT 74
Query 1 --------------------------ATGGTGTTCTACTTCACCAGCAGCAGCGTTAATTCATCTGCCTACACT 48
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGAGTCACCGCACCGCTCCCGGGATCATGGTGTTCTACTTCACCAGCAGCAGCGTTAATTCATCTGCCTACACT 148
Query 49 ATTTACATGGGAAAAGATAAATATGAAAATGAAGATCTGATCAAGCATGGCTGGCCTGAAGATATCTGGTTTCA 122
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATTTACATGGGAAAAGATAAATATGAAAATGAAGATCTGATCAAGCATGGCTGGCCTGAAGATATCT------- 215
Query 123 TGTGGACAAACTCTCTTCGGCTCATGTATACCTTCGATTACATAAGGGAGAGAATATAGAAGACATCCCAAAGG 196
|||||||||||||||||||||||||||||
Sbjct 216 ---------------------------------------------GGGAGAGAATATAGAAGACATCCCAAAGG 244
Query 197 AAGTGCTGATGGACTGTGCCCACCTTGTGAAGGCCAATAGCATTCAAGGCTGCAAGATGAACAACGTTAATGTG 270
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 245 AAGTGCTGATGGACTGTGCCCACCTTGTGAAGGCCAATAGCATTCAAG-------------------------- 292
Query 271 GTATATACGCCGTGGTCTAACCTGAAGAAAACAGCTGACATGGATGTGGGGCAGATAGGCTTTCACAGGCAGAA 344
Sbjct 293 -------------------------------------------------------------------------- 292
Query 345 GGATGTAAAAATTGTGACAGTGGAGAAGAAAGTAAATGAGATCCTGAACCGATTAGAAAAGACCAAAGTCGAGC 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 293 ----GTAAAAATTGTGACAGTGGAGAAGAAAGTAAATGAGATCCTGAACCGATTAGAAAAGACCAAAGTCGAGC 362
Query 419 GGTTCCCAGACCTAGCAGCAGAGAAAGAATGCAGAGATCGTGAAGAGAGGAATGAGAAAAAAGCCCAAATTCAG 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 363 GGTTCCCAGACCTAGCAGCAGAGAAAGAATGCAGAGATCGTGAAGAGAGGAATGAGAAAAAAGCCCAAATTCAG 436
Query 493 GAAATGAAAAAGAGAGAAAAAGAAGAAATGAAGAAGAAGAGGGAAATGGATGAACTTAGGAGCTATTCATCACT 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 437 GAAATGAAAAAGAGAGAAAAAGAAGAAATGAAGAAGAAGAGGGAAATGGATGAACTTAGGAGCTATTCATCACT 510
Query 567 AATGAAAGTTGAAAATATGTCTTCAAATCAGGATGGCAATGATTCAGATGAATTCAATG--------------- 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 511 AATGAAAGTTGAAAATATGTCTTCAAATCAGGATGGCAATGATTCAGATGAATTC-ATGTAAAAGGAGAAAAGG 583
Query 626 -------------------------------------------------------------------------- 625
Sbjct 584 AGAAAAGGACCTTTGAAAGATGTGAATGTAGAGACAATTGCAGACCTTTTGGTTTCATCTGTGTTCTGAAATAT 657
Query 626 -------------------------------------------------------------------------- 625
Sbjct 658 AAAATACAACCAAAATTCTACCTTCATCCTACCCAGAAATTATTGATTTTCAAGTTTTAAAAAAATTGTACCTT 731
Query 626 -------------------------------------------------------------------------- 625
Sbjct 732 TTTTGCTGACAGAAAAGGATCAGATATGTATAAAATAGTTGAACTTGACAGCATATAACTTAAAGTGAAAATGT 805
Query 626 -------------------------------------------------------------------------- 625
Sbjct 806 TTTTGCCAGAACATGTCTTGGTACCTTGTGAAAGCAGGCTGCCCTTGTTCTTGAGATAGACTTTAAAATGAACC 879
Query 626 -------------------------------------------------------------------------- 625
Sbjct 880 AGCTCTGAAAAGTACTTCTGCTGCTCTGGTCTATCCCTGAAAACAGATGTCTTGAAACACTTTTCATATTCTTA 953
Query 626 -------------------------------------------------------------------------- 625
Sbjct 954 AAATAATCTTCACTTCTGTTAAGAAGAACATGTTGGTGGGTAATTATGCGAATGTTTCCCTGTCCCTGATTTCT 1027
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1028 CGATTAGGCGTATGGGTTTTGAAAAAGAGATTTTTCAGAAGATTGTCAGCTTCAGTATTCATGTTCCATCGTGT 1101
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1102 CATCTGGGTCTGTTAGTGTAGTGACCCTCAGTGCAGTCTGTCCCAGCGTTTACGTCCTTGCTTCCTCTGAGCAG 1175
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1176 AGGCCTCCATCTTAGTATCAACATATTTAAAGAAATTGATGGTGTTCATCAAGCTGGGGCCTGTGGCAGTTGTT 1249
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1250 GCCTGAGCACCAAGTAACCCAAGCCACCTATGTGACAACTTCTGGGCCCAGGAGTAATTTCTCAGCATTGAGGG 1323
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1324 TAAAATAGGATGGAGTGCTCTGTTGATCATTTGGGAGATGTAGGTTACCTGATTTGTGCCTTAGGATGCAGCGT 1397
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1398 GAAGCAGAAGTCCATATTGCAATTATGATTTTAGAAGGAACTAAGCATTTTACTCACACCCACAGCAGCAAGAA 1471
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1472 TGACCTCCTGCAGCAGATATTCCACCTGTAATAGCACTTTGGAACTGTGGGCAAAACCAAAAGGCTAGTGTTTC 1545
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1546 CATTTATTCCATGTTGGTGTATGGGGTTGAACTGGAAAATTCCCTGAGGCAAAACTCACTGGCCAAATTTTGAG 1619
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1620 AGGGTATAGAAAATGACTTTAGAGATGAGTGGTTTTGTGTATGTGTCTGATGATATTCAGTCTGATGTTCCGCA 1693
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1694 ATTTTAAAAGTTATAATAAAATACCATTTTTTTAATCTGGAAGGACATTGATATATGAATTCTTAGAATTTGCT 1767
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1768 ATTAAAAAGGGTAGCCCCCATTCCACAAGCTGGTTTTGAGGGTGATCTTGCTCTAAAAAACCTCATTCATCATA 1841
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1842 GGCTCAGTCTGACAGGTTCTGTACGGGGCTATCATCTTTCTCCTCCTCTGCTAAATGCCTCTTTCTTCCAGCTG 1915
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1916 CTCACTGGGTCAAAGGGATGTCCTTTCTCAGATGTATTCTTGATACATCTCAGATGTATTCGTAGCTGTGCTCC 1989
Query 626 -------------------------------------------------------------------------- 625
Sbjct 1990 TTCCATACTTCCAAGGAGTCCGGCTTCTACAGAATTCCTCTGTACCTCACACTGCAACACATGTAGATAGCGCT 2063
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2064 TTTGAAAAATACATATATTTTTACTATAGTATGAGAGGTCCTGGGGCTCAAACTTTAAACATTTCCTAACTCAG 2137
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2138 CTTACACTGGTTTAAAATGTCCAGGTCTCTGCTGAATTCTCTTGTTGAATTCATAGCTCTGTGTTGATTCCTAT 2211
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2212 GCCCCTAACCCTGCAGCCTCTTTGTTTTATTTTTTTCCCCATCTCTGTTGGTCCCAGGGAAAGCAAGGAAATTT 2285
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2286 TCTTTTGAGGACTTATAGGTTGATTGCCCACAGGTCAAACTGTTGGCATTGAACTCCTCTCATTTCTTGCCATT 2359
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2360 GGATTGTTTCCTAAACGTTGGATAGGAGAATTCGAAATTGTTGCTATTTTTATGAGCTGTGCCCTTGATCAAAT 2433
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2434 CTGTGCTGTGGGTCTGAGTCACTTTGCCAATGTCGTCTTCAGTTTCAACACTCTGATCAGCATGCAGGCGAGGG 2507
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2508 GCATGTTTAATTTACTTCACTAACTGCTATATTCTATAGCTTTAGACTTCATATTTCTTATCCACCTTTGTCTA 2581
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2582 GGCTCACGATCTTTGGGCAAGGGAGCTTTGTCACCGTGGTTGGGCTAGAACAAATATTGAGAAGTTTACCAACA 2655
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2656 CAGATGTTGAGAAGTTTATTGAAAGGCACTGACATTAGCAGAATAAGTGATGGACATTAGTTGAACCCCTTCAG 2729
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2730 TGTCTATGTGTTTTATTGTATTGTCTTTAACTCGTTCTTGAAGCACAGATTTCAGCGAGCCTTTCAGCTATTCA 2803
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2804 GTGCCAGCGGTTTTCCCCACTCAGGAAAGATGGTGTGAGCCATACACACAGCAGGATTAGACGGGGAGAGTTTC 2877
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2878 AGCTGCAGCTTCTAGTTTAAGACCAAAGCCCTTCCTCCCGCTGCTGCATCTGTCTGAGAGGGGAAGCTCTTGTT 2951
Query 626 -------------------------------------------------------------------------- 625
Sbjct 2952 TTCCAAGCTGGAACCGTTTATGAGGAAAACTGAGCAGGGTGGCAAAATGGAAAAGGAACAATTTTCTAGTTTTT 3025
Query 626 -------------------------------------------------------------------------- 625
Sbjct 3026 CCTACGCGTGATATTGACGCGTGCTTTTTCTTTGATTTGAGGTACAGCATGTAAATAACAAATTTCCATATTCA 3099
Query 626 -------------------------------------------------------------------------- 625
Sbjct 3100 AAATGATCATATTAGAGTGACTGAGTGACCTTTTGATTTTGAAGCAGACTAAAATCTGACCAGACCACAATGAA 3173
Query 626 -------------------------------------------------------------------------- 625
Sbjct 3174 AAGTATAAAATTAGAAACTTAAATTCCAAGCTAAATTTCAGCTTTGACCCACCTAACTCCAGTGAATAGGTGGC 3247
Query 626 -------------------------------------------------------------------------- 625
Sbjct 3248 AGCTCAGAAACAAGGACAGCACTGCTGCTGCCAGAGCAAGCTCACATCCAGCTGGCACTTCGTGAGAGCTCCTT 3321
Query 626 -------------------------------------------------------------------------- 625
Sbjct 3322 CCTGCCGGGCACGTGTGAGTTCAGCGTGGGCAAGAGACTTTTATGCACATTCTGTCATTCAAAAGGGAAATGAT 3395
Query 626 -------------------------------------------------------------------------- 625
Sbjct 3396 GCCAACCCCAGATGCAGCATGTCCTGAATGAATGATCTGTAAAATACAATAATAAAAGCTTATAGTTTGAGTAG 3469
Query 626 -- 625
Sbjct 3470 AA 3471
