Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08527
- Subject:
- NR_163416.1
- Aligned Length:
- 3208
- Identities:
- 968
- Gaps:
- 2239
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTTCCGGGCAGCAGGGAAGATCTGAGTTCATGTAGCTGGTGTTGGCTTAGGGTCTGGGAGGAAGGCTTTTGGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGATGTAAATAAGAACAAAATCTGCAGCCACCTGGGAAGCCTGGCCTCAGTGTGGAAGAGAAGGCAGCAGGATT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATTACAGAACCTTGTGAAGCCAACGCGGGCAGCCGCCAGGAGCTGCAGACCGAGAGGATCTCGTCCTTTCTTGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCCCAGGGAGACCAGGCCTTTCATTCTGGGCTCGAGACCAACAATTCGAATTCCGAACTCCCCCTGCGTGTGG 296
Query 1 -----------------------------ATGGGCGGGCAGGTGAGCGCTTCCAACAGCTTCTCGAGGCTGCAC 45
|||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 297 GACTCAAGGTTGCCCAGGGCTCACCTCTGATGGGTGGGCAGGTGAGCGCTTCCAACAGCTTCTCGAGGCTGCAC 370
Query 46 TGCAGAAATGCCAACGAGGACTGGATGTCGGCACTGTGTCCCCGGCTCTGGGATGTGCCCCTCCACCACCTCTC 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGCAGAAATGCCAACGAGGACTGGATGTCGGCACTGTGTCCCCGGCTCTGGGATGTGCCCCTCCACCACCTCTC 444
Query 120 CATCCCAGGGAGCCACGACACGATGACGTACTGCCTGAACAAGAAGTCCCCCATTTCGCACGAGGAGTCCCGGC 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CATCCCAGGGAGCCACGACACGATGACGTACTGCCTGAACAAGAAGTCCCCCATTTCGCACGAGGAGTCCCGGC 518
Query 194 TGCTGCAGCTGCTGAACAAGGCCTTGCCCTGCATCACGCGCCCTGTCGTGCTGAAATGGTCCGTCACCCAGGCA 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGCTGCAGCTGCTGAACAAGGCCTTGCCCTGCATCACGCGCCCTGTCGTGCTGAAATGGTCCGTCACCCAGGCA 592
Query 268 CTGGACGTCACAGAGCAGCTGGATGCCGGGGTGCGGTACCTGGACCTGCGGATAGCCCACATGCTGGAGGGCTC 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTGGACGTCACAGAGCAGCTGGATGCCGGGGTGCGGTACCTGGACCTGCGGATAGCCCACATGCTGGAGGGCTC 666
Query 342 GGAGAAGAACCTGCACTTTGTCCATATGGTGTACACAACGGCGCTGGTGGAGGACACACTCACGGAAATCTCGG 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGAGAAGAACCTGCACTTTGTCCATATGGTGTACACAACGGCGCTGGTGGAGGACACACTCACGGAAATCTCGG 740
Query 416 AGTGGCTGGAGCGGCATCCACGCGAGGTGGTCATCCTGGCCTGCAGAAACTTCGAGGGGCTGAGCGAGGACCTG 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGTGGCTGGAGCGGCATCCACGCGAGGTGGTCATCCTGGCCTGCAGAAACTTCGAGGGGCTGAGCGAGGACCTG 814
Query 490 CACGAGTACCTGGTCGCCTGTATCAAGAACATCTTCGGGGACATGCTGTGTCCTCGTGGGGAGGTGCCGACACT 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CACGAGTACCTGGTCGCCTGTATCAAGAACATCTTCGGGGACATGCTGTGTCCTCGTGGGGAGGTGCCGACACT 888
Query 564 GCGGCAGCTGTGGTCCCGGGGCCAACAGGTCATCGTCTCCTATGAAGACGAGAGCTCCTTGCGCCGGCACCACG 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GCGGCAGCTGTGGTCCCGGGGCCAACAGGTCATCGTCTCCTATGAAGACGAGAGCTCCTTGCGCCGGCACCACG 962
Query 638 AGCTGTGGCCAGGAGTCCCCTACTGGTGGGGAAACAGGGTGAAGACCGAGGCCCTCATCCGATACCTGGAGACC 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AGCTGTGGCCAGGAGTCCCCTACTGGTGGGGAAACAGGGTGAAGACCGAGGCCCTCATCCGATACCTGGAGACC 1036
Query 712 ATGAAGAGCTGCGGCCGCCCAGGAGGGTTGTTCGTGGCCGGCATCAACCTCACGGAGAACCTGCAGTACGTTCT 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATGAAGAGCTGCGGCCGCCCAGGAGGGTTGTTCGTGGCCGGCATCAACCTCACGGAGAACCTGCAGTACGTTCT 1110
Query 786 GGCGCACCCGTCCGAGTCCCTGGAGAAGATGACGCTGCCCAACCTTCCGCGGCTGAGCGCGTGGGTCCGAGAGC 859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GGCGCACCCGTCCGAGTCCCTGGAGAAGATGACGCTGCCCAACCTTCCGCGGCTGAGCGCGTGGGTCCGAGAGC 1184
Query 860 AGTGCCCGGGGCCGGGTTCACGGTGCACCAACATCATCGCGGGGGACTTCATCGGCGCAGACGGCTTCGTCAGT 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AGTGCCCGGGGCCGGGTTCACGGTGCACCAACATCATCGCGGGGGACTTCATCGGCGCAGACGGCTTCGTCAGT 1258
Query 934 GACGTCATCGCGCTCAATCAGAAGCTGCTGTGGTGC-------------------------------------- 969
||||||||||||||||||||||||||||||||||||
Sbjct 1259 GACGTCATCGCGCTCAATCAGAAGCTGCTGTGGTGCTGACGGGACCCTTCTGAAGTTCGGGACGCGGCGGCTGC 1332
Query 970 -------------------------------------------------------------------------- 969
Sbjct 1333 AGTTTCACCCCCGAATTTCCAAGTATTGTGACTTTGTTTGGGCCAAATGTTGGTGATCATAGGACCGATGATAA 1406
Query 970 -------------------------------------------------------------------------- 969
Sbjct 1407 TACGTTTTCATTTTCTTTAAAATAGAGATGGGGTGGCTGGGCGTGGTGACTTCGCCTGTCTTCCCAGCACTTTG 1480
Query 970 -------------------------------------------------------------------------- 969
Sbjct 1481 GGAGGCCGAGGTGGGTGGATCATGAGGTCAGGAGCTTGAGAGCAGCCTGACCAACATGGTGAAATCCCATCTCT 1554
Query 970 -------------------------------------------------------------------------- 969
Sbjct 1555 ACTAAAAATACAAAACTTAGCTGGGTGTGTGGCAGGCGCCTGTAGTCCCAGTTACTCGGGAGGCTCAGGCAGGA 1628
Query 970 -------------------------------------------------------------------------- 969
Sbjct 1629 GAACTGCTTGAAGCCGGGAGATGGAGGTTGCATTGAGCTGACATCGTGCCACTGCACTCCAGTCTGAATGATAG 1702
Query 970 -------------------------------------------------------------------------- 969
Sbjct 1703 ACCGAGACTCCATCTCAAAAGAAAAAAAAACAGCCGAGTTGCTGGGATCACAGGCGTGAGCCACCGCACCTGGC 1776
Query 970 -------------------------------------------------------------------------- 969
Sbjct 1777 CTCAAGCCAGTATTTCCCTGGCCCTAAATCATTCCTGGCTGGGTCCCAGCCCAGTAGAGCCAGCCCCCCAGCCC 1850
Query 970 -------------------------------------------------------------------------- 969
Sbjct 1851 GGAGTGCTACTGAAGTGTTCAAAAGTTGTCAATCCTCAGCCGTTCCCTAGTCCTGTTGCCCGGTTCTGCCGAAG 1924
Query 970 -------------------------------------------------------------------------- 969
Sbjct 1925 CCCCTTGAAGGCTGTGGCCTGGGCTGTTCCCTCATTCATTCCTGCCTCCCGAGCCAAACCCAGGTATCCGCTTG 1998
Query 970 -------------------------------------------------------------------------- 969
Sbjct 1999 TGCCCTGCGTGGTGTGGCAGCGTCTTCTCTCGGGAAGGGTCAGGAGTAATTTCTTCTTTCAGTGGCCTCTCTGT 2072
Query 970 -------------------------------------------------------------------------- 969
Sbjct 2073 GCTAGTCCCGGTCACCTCCGTGAATTAAAGTCCTACAGGTACAAGGGAGACCCCCCCCCCACGGAAGGCGCCCC 2146
Query 970 -------------------------------------------------------------------------- 969
Sbjct 2147 CAGTCCGTGTGGGAGACTCGCACACCGGTTTTCTGCACAGGTTTCTTTCTGCCTCTGAAGCGTGAACGGTCCTA 2220
Query 970 -------------------------------------------------------------------------- 969
Sbjct 2221 GTTTCAGACGCAGATCCTGCAAATACTTTTTTTTGTTTTTTTGAGATGGATTTTCCCTCTTGTTGTTCAGGCTG 2294
Query 970 -------------------------------------------------------------------------- 969
Sbjct 2295 GAGTGCAATGGCACGATCTCAGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTC 2368
Query 970 -------------------------------------------------------------------------- 969
Sbjct 2369 CCGAGGAGCTGAGATTACAGGCGCGTGCCACCGTGCCTGGTTAATTTTGTATTTGTATTTTTATTTATGTTTTG 2442
Query 970 -------------------------------------------------------------------------- 969
Sbjct 2443 AGACGGAGTTTCGCTCTCGTTGCCGAGGCTGGAGTGTAGTAGTGTGATCCTGGCTCACTGCAACCTCCACCTCC 2516
Query 970 -------------------------------------------------------------------------- 969
Sbjct 2517 CGGGTTCCAGCAAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTGCAGGCGCCCGCCACCACGCCCGGAT 2590
Query 970 -------------------------------------------------------------------------- 969
Sbjct 2591 AATTTTTGTGTGTTTAGCAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGATCTCCTGACCTCAGGTG 2664
Query 970 -------------------------------------------------------------------------- 969
Sbjct 2665 ATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATGACAGGCGTGAGCCACCGCGCCCGGCCTATACCTCATTTT 2738
Query 970 -------------------------------------------------------------------------- 969
Sbjct 2739 CTACATGTCGCTTGTTGGAGCTGCTGGTTCAAGTTCCCAGCCAGCCAATGGATGCCAGCACCATTTTTACTCCC 2812
Query 970 -------------------------------------------------------------------------- 969
Sbjct 2813 CTTTCCCAAGCAAATCGTGCATTTTTGTCTAACGAGAGACATCAGTTTCTCAGGATGATCCTCAAGAACGTTAT 2886
Query 970 -------------------------------------------------------------------------- 969
Sbjct 2887 GGAGTCCATGTTGCAATAGGTTCTCTTTGGGACCTAATGACTCATTTTCCAAAAATCCGCTTCTACTTTTGGTA 2960
Query 970 -------------------------------------------------------------------------- 969
Sbjct 2961 CCCGGTTGCTACGGTGAAATGAAGGTGCCCCGCATCCAGAAAGACGCACTCCTGGACCACAACCGGCGGCTACC 3034
Query 970 -------------------------------------------------------------------------- 969
Sbjct 3035 TCAGCCCCACGGCTCTGCAGGATCAGGGCTCGGGCAGGCCCCGCGGAGATGAAGAATTTGCAGGGAGCCTCCCT 3108
Query 970 -------------------------------------------------------------------------- 969
Sbjct 3109 GACTTCCGTCGGCTGTGAATCCTTGTCTGTCAGGGGCGTATCCACAAAATCACCGAATTCATACAGATCGTTTA 3182
Query 970 -------------------------- 969
Sbjct 3183 AATAAATGAACATCATTAAAGTCAAA 3208
