Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08533
Subject:
NM_145964.2
Aligned Length:
908
Identities:
669
Gaps:
115

Alignment

Query   1  ATGGGGAACTGCTGGTGGACGCAGTGCTTCGGACTGCTTCGCAAGGAAGCGGGGCGGCTGCAGCGAGTAGGCGG  74
           ||||||||||||||.||||||||.||||||||.|||||.|||..|||||||||.||||||||||||    ||| 
Sbjct   1  ATGGGGAACTGCTGCTGGACGCAATGCTTCGGGCTGCTCCGCCGGGAAGCGGGTCGGCTGCAGCGA----GCG-  69

Query  75  CGGCGGAGGATCCAAGTATTTTAGAACATGCTCAAGAGGTGAGCACTTAACAATAGAGTTTGAGAATCTAGTAG  148
            |||||||||||.|||||||||||.||||||.|||||||.||||||||.||.||||||||||||||.||.||.|
Sbjct  70  -GGCGGAGGATCAAAGTATTTTAGGACATGCCCAAGAGGAGAGCACTTGACCATAGAGTTTGAGAACCTCGTGG  142

Query 149  AAAGTGATGAAGGGGAGAGCCCAGGAAGCAGTCATAGGCCTCTTACTGAGGAAGAAATTGTTGACCTA-AGAGA  221
           |.||||||||.||||||||||||||||||||.||||||||.||.|||||.||.|||||.|.||||.|| || ||
Sbjct 143  AGAGTGATGAGGGGGAGAGCCCAGGAAGCAGCCATAGGCCACTCACTGAAGACGAAATCGCTGACTTACAG-GA  215

Query 222  AAGGCATTATGATTCCATTGCCGAAAAACAAAAAGATCTTGATAAGAAAATTCA---------------AAAA-  279
           ..|||||||||||||.|||||.|||||.||.||||||.|.||||.||||||.||               |.|| 
Sbjct 216  GCGGCATTATGATTCTATTGCAGAAAAGCAGAAAGATGTGGATAGGAAAATCCAGAGGCAGTTAGCCTTACAAG  289

Query 280  --------------------------------------------------------------------------  279
                                                                                     
Sbjct 290  AGGAGAAGTTAAGACTAGAAGAGGAGGCTTTATACGCTGCCCAGCGTGAAGCAGCCAGGGCAGCAAGGCAGCGG  363

Query 280  ---------GAGCAAGAAAGGCAGAGAATTGTGCAGCAATATCATCCTTCCAACAATGGAGAATATCAAAGTTC  344
                    ||||||||||.|||||||.|||..|||||.|||||   ||.||.||.||||||.|||||||||.|
Sbjct 364  AAGCTCCTGGAGCAAGAAAAGCAGAGAGTTGCTCAGCACTATCA---TTGCAGCAGTGGAGACTATCAAAGTGC  434

Query 345  AGGACCAGAAGATGACTTCGAATCTTGTTTGAGAAATATGAAGTCACAGTATGAAGTTTTTCGAAGTAGTAGAC  418
           |||||||||.||.|||||.|||||||..||.|||||.||.|||||||||||||||||.|||||.||.|||||||
Sbjct 435  AGGACCAGAGGACGACTTTGAATCTTCCTTAAGAAACATAAAGTCACAGTATGAAGTGTTTCGGAGCAGTAGAC  508

Query 419  TCTCATCAGATGCTACAGTTTTGACACCAAATACAGAAAGCAGTTGTGATTTAATGACCAAAACTAAATCAACT  492
           ||||.||.||.||.|||||..||||||||||.||.||.|||||.|||||..|.|||||||||||.||||||||.
Sbjct 509  TCTCCTCTGACGCCACAGTGCTGACACCAAACACCGAGAGCAGCTGTGACCTGATGACCAAAACCAAATCAACG  582

Query 493  AGTGGAAATGACGACAGCACATCCTTAGATCTAGAGTGGGAAGATGAAGAAGGAATGAATAGAATGCTTCCAAT  566
           ||||||||||||||||||||.||||||||.|||||||||||||||||||||||||||||.||.|||||.||.||
Sbjct 583  AGTGGAAATGACGACAGCACCTCCTTAGACCTAGAGTGGGAAGATGAAGAAGGAATGAACAGGATGCTGCCCAT  656

Query 567  GAGAGAACGTTCCAAAACAGAGGAAGACATTCTACGGGCAGCACTTAAGTATAGCAACAAGGAGACTGGAAGTA  640
           |||.||.||.|||||.||||||||||||||.||.|||||||||||.|||||.||||.||||.||   ||.||.|
Sbjct 657  GAGGGAGCGCTCCAAGACAGAGGAAGACATCCTGCGGGCAGCACTGAAGTACAGCAGCAAGAAG---GGCAGCA  727

Query 641  ATCCTACATCAGCCTCTGATGATTCCAATGGGCTGGAGTGGGAAAATGATTTTGTTAGTGCCGAAATGGATGAT  714
           |.||.||.||.|||||.|||||.|||||.||||||||||||||.||.||.|||||.||||||||.|||||.||.
Sbjct 728  ACCCCACGTCCGCCTCGGATGACTCCAACGGGCTGGAGTGGGAGAACGACTTTGTCAGTGCCGAGATGGACGAC  801

Query 715  AATGGAAATTCCGAGTATTCTGGATTTGTAAATCCTGTATTAGAACTGTCTGATTCTGGCATAAGGCATTCTGA  788
           ||.||.||.||.|||||.||.||.|||||.||.|||||.|||||||||||.|||||||.|||.|.|||.|||||
Sbjct 802  AACGGCAACTCTGAGTACTCCGGGTTTGTGAACCCTGTGTTAGAACTGTCGGATTCTGCCATCAAGCAGTCTGA  875

Query 789  CACAGATCAACAGACTCGG-  807
           .|||||.||.|||| ||.| 
Sbjct 876  TACAGACCAGCAGA-TCCGA  894

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.