Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08533
- Subject:
- NR_136622.2
- Aligned Length:
- 5911
- Identities:
- 804
- Gaps:
- 5104
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTCACGCTGGGCTAGGAGCTGAGGCGAGAAGGGCCATGCGGACGGCGAGGGAGTCCAGAGCCTTGAGCCCGGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCTCCTCCCTCGCGCAGCGGTGGCTCTGCGGCCGCTGGAGTAAACACTGCCTTTGTTCCCTAGCGCCTCGTCTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCGTCGCCCCGTGCCCTCACGCCGCCGGGCTCTGGCCGGCCCGCCCTCGGTCCTTGAACCCCATTTCGGCTCGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCGTGCGGATGCAGCTGCCGGGCCTGGGTTTGGGCATTGAGCGGGAGGAGGAGGAGGAGCGGCGGCGCCTGGG 296
Query 1 ---------ATGGGGAACTGCTGGTGGACGCAGTGCTTCGGACTGCTTCGCAAGGAAGCGGGGCGGCTGCAGCG 65
||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CGGCATGCGATGGGGAACTGCTGCTGGACGCAGTGCTTCGGACTGCTTCGCAAGGAAGCGGGGCGGCTGCAGCG 370
Query 66 AGTAGGCGGCGGCGGAGGATCCAAGTATTTTAGAACATGCTCAAGAGGTGAGCACTTAACAATAGAGTTTGAGA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGTAGGCGGCGGCGGAGGATCCAAGTATTTTAGAACATGCTCAAGAGGTGAGCACTTAACAATAGAGTTTGAGA 444
Query 140 ATCTAGTAGAAAGTGATGAAGGGGAGAGCCCAGGAAGCAGTCATAGGCCTCTTACTGAGGAAGAAATTGTTGAC 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATCTAGTAGAAAGTGATGAAGGGGAGAGCCCAGGAAGCAGTCATAGGCCTCTTACTGAGGAAGAAATTGTTGAC 518
Query 214 CTAAGAGAAAGGCATTATGATTCCATTGCCGAAAAACAAAAAGATCTTGATAAGAAAATTCAAAAAGAG----- 282
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTAAGAGAAAGGCATTATGATTCCATTGCCGAAAAACAAAAAGATCTTGATAAGAAAATTCAAAAAGAGTTAGC 592
Query 283 ----CA-------------------------------------------------------------------- 284
||
Sbjct 593 CTTACAAGAAGAGAAGTTAAGACTAGAAGAAGAAGCTTTATACGCTGCACAGCGTGAAGCAGCCAGGGCAGCAA 666
Query 285 ------------------AGAAAGGCAGAGAATTGTGCAGCAATATCATCCTTCCAACAATGGAGAATATCAAA 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGCAGCGAAAGCTCTTGGAGAAAGGCAGAGAATTGTGCAGCAATATCATCCTTCCAACAATGGAGAATATCAAA 740
Query 341 GTTCAGGACCAGAAGATGACTTCGAATCTTGTTTGAGAAATATGAAGTCACAGTATGAAGTTTTTCGAAGTAGT 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GTTCAGGACCAGAAGATGACTTCGAATCTTGTTTGAGAAATATGAAGTCACAGTATGAAGTTTTTCGAAGTAGT 814
Query 415 AGACTCTCATCAGATGCTACAGTTTTGACACCAAATACAGAAAGCAGTTGTGATTTAATGACCAAAACTAAATC 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGACTCTCATCAGATGCTACAGTTTTGACACCAAATACAGAAAGCAGTTGTGATTTAATGACCAAAACTAAATC 888
Query 489 AACTAGTGGAAATGACGACAGCACATCCTTAGATCTAGAGTGGGAAGATGAAGAAGGAATGAATAGAATGCTTC 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AACTAGTGGAAATGACGACAGCACATCCTTAGATCTAGAGTGGGAAGATGAAGAAGGAATGAATAGAATGCTTC 962
Query 563 CAATGAGAGAACGTTCCAAAACAGAGGAAGACATTCTACGGGCAGCACTTAAGTATAGCAACAAGGAGACTGGA 636
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 963 CAATGAGAGAACGTTCCAAAACAGAGGAAGACATTCTACGGGCAGCACTTAAGTATAGCAACAAGAAGACTGGA 1036
Query 637 AGTAATCCTACATCAGCCTCTGATGATTCCAATGGGCTGGAGTGGGAAAATGATTTTGTTAGTGCCGAAATGGA 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGTAATCCTACATCAGCCTCTGATGATTCCAATGGGCTGGAGTGGGAAAATGATTTTGTTAGTGCCGAAATGGA 1110
Query 711 TGATAATGGAAATTCCGAGTATTCTGGATTTGTAAATCCTGTATTAGAACTGTCTGATTCTGGCATAAGGCATT 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TGATAATGGAAATTCCGAGTATTCTGGATTTGTAAATCCTGTATTAGAACTGTCTGATTCTGGCATAAGGCATT 1184
Query 785 CTGACACAGATCAACAGACTCGG--------------------------------------------------- 807
||||||||||||||||||||||.
Sbjct 1185 CTGACACAGATCAACAGACTCGATAGGGTAAAATTGTGTGACCTTGTTTATCAGTTATGACCAAATGTTAAAAA 1258
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1259 CCAACTAGAATGTATAAGTGATTGTGCTTAGCCTTTTTGTAAGGGAGATGTGTAAGAAACCATGTTGTAAATGC 1332
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1333 TTATTTTATTACAAAGGAGTAGGGATGATAGGATCTGAATTGATACAGAATTAAGTGCAATTTCATCATCTGCC 1406
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1407 TTCTGCTTTTCAAGACCAATTTAATGGTCCTGTCATGTTACTGATTAAATTTACTTTGTCTTGTCTTTATAGCA 1480
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1481 TTTCTGTTTACTATGGTAGATTTCCACTTTCAATTTTTAAAATTAATTTTACTTTGAATGATTTATGAAGCCTA 1554
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1555 TTTCATTGTCTAACTATGAAAATATTAAGACTTTTTTGTTAATTCTCAGCCGATGTGAAGGAAGCATGAGGAGG 1628
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1629 GATCGTCAGATTCAGATTTAGAATAGTGTTCCCGTTTCCAGCATTATTTATTTCTATGACTTCTTTGGATTTTA 1702
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1703 TTATCTAATAGTAAGTACAGTTGATGTGGGTAGATGACTCTAAGAAATGCTGAAGTATCGGCATTACATGTGTT 1776
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1777 TATTTACATGTCCTAGTATGATAATGTTGATTCAATCTGAACAAAAGATAATATAAAAATAACCCTTCAGAGTT 1850
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1851 TGGACATTTCAAGTTGGTAATAATAAAAAATAATATTTAAGAAGATATATATATATATATATTTAGTTTTTTCC 1924
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1925 ACTTCATTTTACATGCCACTATATTGACTTTAATTGATATACAGTATTAAGTTTTTAGGTGCCATTATTTTTAA 1998
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1999 AAAATTCTATATTTCCAATGAACGATGTTAGATTTTACACAGAACATATTCTCTGCATGATTTCAGAAAAGAAA 2072
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2073 ATCTAAAAAGGTAATACGGGTATTTCAAATAAAATCCTTTCTGGTATGAAAGGCTCCATTGATTTTATTAAGCC 2146
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2147 TTCCTTTACCTTGTAGTACAAGGTGCTTTAATGGGATAGAACTAAGCATATCAATATCTATAACTGCATTTTGT 2220
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2221 GCTAGACAATTACTGTTCTTTTCTCTAAAATGTATATGTCAATTTACAAGGCCAGGGATAGAAAACACTCCATA 2294
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2295 ATTGCTTTCCTTGATTTTGCTGAGGATTTGGTATGATTTTAGTAAGCAAACTGTTTTTTGGTTTTTCCTTAATG 2368
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2369 TTTTTAATTTTTTTTCCTCTTGCAACAATGACGGTGCATGTTCTTATAAATATAGGAAGGTCCAGATATAAATA 2442
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2443 GTAACCTAAAGTTCTTGCTGTGCTTAAAAAAAAAAATCATGTGGCCCTTTCAATATTTGAACTGCTAAGCAATG 2516
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2517 ACATCTGTAGTTTTATCTCCTTTTTTATGTCATAGAAATTAATATGATACTTTAAATATGTAAATATAATACAT 2590
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2591 TAGGTAATGCTATTATTTATATCTGTCTTAACATAATTTAAGTTGTAGCTGTGTCTTGGAAATATTTTTAAGGT 2664
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2665 AATCTATATTCACATTGCCTGTGTTAATGCTTTTTAAAGTTTGTATACATCAGATGTATATTTTTGGTTTGGCA 2738
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2739 TAAGCTACGATTGTAATTTTTCTTGGCTTTTTGTTCATAAAGAATTTTTTGAAGGAATGGTAACAAATGGTAAT 2812
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2813 TTACAAATGGTTGTGAATAAACACATTTTTACACTTAAAGGTAATAAGTTATTTGACTATTATTGGTTTTACTC 2886
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2887 CATAAACATGCAGGTATTCTGATTCCTGACTTGTAATTATTTTATTAAATCTGATGTGAAGACAAAAGTAAATT 2960
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2961 AAGAAAGCAAGATGGAACTAGAAAATGTGTTTTAACTGTTAAAAAAAAGTTAACGTTTTGTTTTGTGTTTATAA 3034
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3035 AAAGTACTAGAAATAACTTATTCAGCAAATATTGGAATAGTATTTAATATTATTGGAACTGTGTCTGGTGGGTG 3108
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3109 TTAGGGACATAGAAGTACAAAGACATATAAGGTCTCTGCTCTTTGCTTACCATTCTGGTGAGAGAGAGAGACAA 3182
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3183 TAATAAGTAAACATACATGCAAGAAAATCACAGGTCACAGTTAGAAAATATACAAGATTATAGGAGAGAGAGTA 3256
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3257 ACTGGGGGCCAATTGACTACTTCTCATAGGTCAGGACAATCCTCTCTGAGGAGATAGCTTGGCTAAAACTTAAT 3330
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3331 TGTTTTAAGTTTTAGTTGTTAACTTGTTAATTGTTTACTTGGCTAAAACCTAATTGTTAAGCAGGAAACAGTCA 3404
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3405 AGTAAAACCTGGTATGAAGCATGTTATAAGCAAAGGGAACGGCAAGTACAAAGTACCTGAGGTGGGAAAGAGTT 3478
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3479 TGTTATGTTCTGTGAATAAAAAGACCACTGGGAATGAAGCATCATGAGTGAGGGGGAAGAGTGGTATGAGATGA 3552
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3553 TACTGGAGTGGTAGTTAAGGGCCAGATGATGCAAGACCTTGTAGACCAAGAATGAGTTTTATTTGATGTGTAAT 3626
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3627 AGAAAGCCACTGAAATTTTTTGTAAGCAAGGATGTACAGTCATCATATACACATTTTCAAACGATTGCTTTAGT 3700
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3701 TGCTGTGTAGAGAATGGATTGTAAGAAGGCAAGAGTGGATATATAGCACTCCCAATGGAATATAGTGTGCCTTG 3774
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3775 GGTTTACAATGGCTGTGAAAAGGCAGAGCAGATTTGTTTTAGAGGTAGAATCATCAGGATTTTCTGATGGGTTG 3848
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3849 GATATAAGACTAAAGGAAGGGGTAGAATCAGATACTACTGTAGGGGTAACACATCTGGCATGGTGCCGTGGCTA 3922
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3923 CCTTGCTCACTGCACATAGTCCACGTAGGCAAAACTCAACCACAGTCTGACACAGGTCTTGGTAGAAAACATCG 3996
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3997 TGATCCTCTCTGGATCCTCCATGGCAAGATAGGCCATCGTAAAGGAGCTGTCAAAGGGCCATTTATCTTGCAAA 4070
Query 808 -------------------------------------------------------------------------- 807
Sbjct 4071 ATACCTCCCTGTCTTGCAAAAGGCTGCCGTGAGGCAATTTCTCATCCAGCTGGTTTCCAGTGACCTCACTCTCA 4144
Query 808 -------------------------------------------------------------------------- 807
Sbjct 4145 TTCAGGTGCAGATACCGACTATAAAAATGTTTAGCTATAGTTTAGAGTTGGCTCCTCAACAGAGCTATTTCTAC 4218
Query 808 -------------------------------------------------------------------------- 807
Sbjct 4219 TTGTCATCTGTCATCTTGTCCCCTTGGTTCAGTGTCATCCAGGGATGTCCCTAAGGACCAGGTATACAGGGAGC 4292
Query 808 -------------------------------------------------------------------------- 807
Sbjct 4293 TGACTCCATCCTGATACTGCTTTTGCTGTCTGTGTAAATAATAAACTGTCTCAATCTATTTGGACTCATTGTCT 4366
Query 808 -------------------------------------------------------------------------- 807
Sbjct 4367 CCCTACTGGCCAAATCTATAGATGTCTGACAGCCAGCCTAGTAGCTGCAAGTGCCCTTAACTATAACTTCTTGG 4440
Query 808 -------------------------------------------------------------------------- 807
Sbjct 4441 TTCTGATTTGACTTCAGTGTAATGGGAGGAACAGGTTTGGGAAAGTGGGGAAAATGAAAGAGTTCTATTTGAAA 4514
Query 808 -------------------------------------------------------------------------- 807
Sbjct 4515 AGTTAACTTTGAGGTGTTCATAAGATATTTGGATGAAGATGTCAAGTAGGTGATGGGATATATGTCTGCAGCCC 4588
Query 808 -------------------------------------------------------------------------- 807
Sbjct 4589 AAGAAAGAGGTCTAGGTTCAAGTTTGGGAGTCATTAGTAGGAAAATGGTATTTTAAGTCATTAAACCAGCTGAG 4662
Query 808 -------------------------------------------------------------------------- 807
Sbjct 4663 TTCACCCCAGGGGAGCACATAGGCAGAAAAGCCCCACTAAGTGTTGACATTTAGAAGTTGGGGGTAGTGAAACA 4736
Query 808 -------------------------------------------------------------------------- 807
Sbjct 4737 GTCGTCAAAAGAAACAGATACAGGAGGAATGCAGGAACCAGAGAATAGTGTCACAGGAGCCAGGAAATAAGAGG 4810
Query 808 -------------------------------------------------------------------------- 807
Sbjct 4811 GCTCAACAATAGCAAATGCTTTGAAAAGAGGTCCGCTGCTTTAGTTGCATTTGGAGACAGTTACACAAATGAAG 4884
Query 808 -------------------------------------------------------------------------- 807
Sbjct 4885 GGATGGAAACTGGGGAGTTGGGGATGAAGAATAAAGAACAGCTAATGCAGACAATTTGAAAAGAGAGCAGAGAA 4958
Query 808 -------------------------------------------------------------------------- 807
Sbjct 4959 ATGGGGTAGCTGGAAGGGGATGTGGAGTTATAGAAGGGTTTTTATTTAAAAGATACTAGCTTTAGAGTAGATAG 5032
Query 808 -------------------------------------------------------------------------- 807
Sbjct 5033 GCAGATATGAACAGGGCAGGACAGCGCCACAAAGACTGTGAGGGCTGGTGACAGGGAAGGGAAAATCTAACAGG 5106
Query 808 -------------------------------------------------------------------------- 807
Sbjct 5107 AGACATCTTGAGCTCATGGGCAACAACTTCCCAATAAGAATTTAAGATGGCAGAGTTTGGCCTTCCTCTGGGGG 5180
Query 808 -------------------------------------------------------------------------- 807
Sbjct 5181 CATGACCAGACATGCGCAGTAAGGGGCAAAATGACAGAGTTTGACAAATATATGACCTTCCCATGGGGCTTGGC 5254
Query 808 -------------------------------------------------------------------------- 807
Sbjct 5255 CGGGAGTGCTAGCCCAGTAAGGGAAAATTGCCCTAAGAGAGCATGTGCATAACTTCAATCACCAAAAGGCCCTT 5328
Query 808 -------------------------------------------------------------------------- 807
Sbjct 5329 CCAGATACTGGCAAACCACTGCACATACAGGGAGGGAAGAGATGGGGAAAAAAATAGGAAATAATAAATCTCTA 5402
Query 808 -------------------------------------------------------------------------- 807
Sbjct 5403 AGAGCCCTAAGACAAAGGTCAAGCTGGGTACTCAATCTTTTGACGTCCCCCTTCGTTCCATCCAAGTGTACTTT 5476
Query 808 -------------------------------------------------------------------------- 807
Sbjct 5477 TTTTTGCTTCAATAAACTCTTGTTTCTGCCTTAAATATAATTCTGTCTCTTGGCTGAATTCTTTCTCCCAAGAA 5550
Query 808 -------------------------------------------------------------------------- 807
Sbjct 5551 GACAAAGATCAAGGACTATGGAGCGTGCCCATACTCACCACTGGTAACACTAGAACTTTTGAAATGATATATTT 5624
Query 808 -------------------------------------------------------------------------- 807
Sbjct 5625 TGGAATTATGCCCGCTTTTTTTTCAATAGATAAATATATTTTTCTAGCAGAGGCCAGAGGTTTCGTTTAACTAT 5698
Query 808 -------------------------------------------------------------------------- 807
Sbjct 5699 GTAAACATGTCCTAATCATAATTTCTTGAGAATACAGACATCTAAAAAAGATTTTATGTTAAATATGTAGTGTT 5772
Query 808 -------------------------------------------------------------------------- 807
Sbjct 5773 TTCCCATCTTCATTTATTTGGTATTTCTGGTTAATTGTCTGACAGTAAAGGAGTTCACAAAAGAAATCTGAGAT 5846
Query 808 ----------------------------------------------------------------- 807
Sbjct 5847 TCCACATTGAAATCCTAAATGTAAAACAACAACAACAATAACAATAAAAATGGAGAGAAACAGAA 5911