Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08533
Subject:
XM_006501240.1
Aligned Length:
1118
Identities:
670
Gaps:
319

Alignment

Query    1  -------------------------------------------------------------------ATGGGGA  7
                                                                               |||||||
Sbjct    1  ATGCAGCTGCTCCGCCTGGGCTCGCGCTCGGGGCAGGAGGAGGAGCGGCGGCTCCGGGCGGCATGCGATGGGGA  74

Query    8  ACTGCTGGTGGACGCAGTGCTTCGGACTGCTTCGCAAGGAAGCGGGGCGGCTGCAGCGAGTAGGCGGCGGC---  78
            |||||||.||||||||.||||||||.|||||.|||..|||||||||.|||||||||||||..|||||.|||   
Sbjct   75  ACTGCTGCTGGACGCAATGCTTCGGGCTGCTCCGCCGGGAAGCGGGTCGGCTGCAGCGAGCGGGCGGAGGCTGT  148

Query   79  --------------------------------------------------------------------------  78
                                                                                      
Sbjct  149  TGTGCATTGTGATCCAAAATCATGTTATTCCAAGTACTTCTAACTTAGGGAAGGAAGAAAATGAAGACTCACAT  222

Query   79  ------------------------------------------------------------------GGAGGATC  86
                                                                              |.|.||||
Sbjct  223  AAGAAAAGAGGTCACATTTCACTCTCCAACAAGAAAATGAGTGATGCCAGCTGCTGCACACAATGTGAAAGATC  296

Query   87  CAAGTATTTTAGAACATGCTCAAGAGGTGAGCACTTAACAATAGAGTTTGAGAATCTAGTAGAAAGTGATGAAG  160
            .|||||||||||.||||||.|||||||.||||||||.||.||||||||||||||.||.||.||.||||||||.|
Sbjct  297  AAAGTATTTTAGGACATGCCCAAGAGGAGAGCACTTGACCATAGAGTTTGAGAACCTCGTGGAGAGTGATGAGG  370

Query  161  GGGAGAGCCCAGGAAGCAGTCATAGGCCTCTTACTGAGGAAGAAATTGTTGACCTA-AGAGAAAGGCATTATGA  233
            |||||||||||||||||||.||||||||.||.|||||.||.|||||.|.||||.|| || ||..||||||||||
Sbjct  371  GGGAGAGCCCAGGAAGCAGCCATAGGCCACTCACTGAAGACGAAATCGCTGACTTACAG-GAGCGGCATTATGA  443

Query  234  TTCCATTGCCGAAAAACAAAAAGATCTTGATAAGAAAATTCA---------------AAAA-------------  279
            |||.|||||.|||||.||.||||||.|.||||.||||||.||               |.||             
Sbjct  444  TTCTATTGCAGAAAAGCAGAAAGATGTGGATAGGAAAATCCAGAGGCAGTTAGCCTTACAAGAGGAGAAGTTAA  517

Query  280  -----------------------------------------------------------------------GAG  282
                                                                                   |||
Sbjct  518  GACTAGAAGAGGAGGCTTTATACGCTGCCCAGCGTGAAGCAGCCAGGGCAGCAAGGCAGCGGAAGCTCCTGGAG  591

Query  283  CAAGAAAGGCAGAGAATTGTGCAGCAATATCATCCTTCCAACAATGGAGAATATCAAAGTTCAGGACCAGAAGA  356
            |||||||.|||||||.|||..|||||.|||||   ||.||.||.||||||.|||||||||.||||||||||.||
Sbjct  592  CAAGAAAAGCAGAGAGTTGCTCAGCACTATCA---TTGCAGCAGTGGAGACTATCAAAGTGCAGGACCAGAGGA  662

Query  357  TGACTTCGAATCTTGTTTGAGAAATATGAAGTCACAGTATGAAGTTTTTCGAAGTAGTAGACTCTCATCAGATG  430
            .|||||.|||||||..||.|||||.||.|||||||||||||||||.|||||.||.|||||||||||.||.||.|
Sbjct  663  CGACTTTGAATCTTCCTTAAGAAACATAAAGTCACAGTATGAAGTGTTTCGGAGCAGTAGACTCTCCTCTGACG  736

Query  431  CTACAGTTTTGACACCAAATACAGAAAGCAGTTGTGATTTAATGACCAAAACTAAATCAACTAGTGGAAATGAC  504
            |.|||||..||||||||||.||.||.|||||.|||||..|.|||||||||||.||||||||.||||||||||||
Sbjct  737  CCACAGTGCTGACACCAAACACCGAGAGCAGCTGTGACCTGATGACCAAAACCAAATCAACGAGTGGAAATGAC  810

Query  505  GACAGCACATCCTTAGATCTAGAGTGGGAAGATGAAGAAGGAATGAATAGAATGCTTCCAATGAGAGAACGTTC  578
            ||||||||.||||||||.|||||||||||||||||||||||||||||.||.|||||.||.|||||.||.||.||
Sbjct  811  GACAGCACCTCCTTAGACCTAGAGTGGGAAGATGAAGAAGGAATGAACAGGATGCTGCCCATGAGGGAGCGCTC  884

Query  579  CAAAACAGAGGAAGACATTCTACGGGCAGCACTTAAGTATAGCAACAAGGAGACTGGAAGTAATCCTACATCAG  652
            |||.||||||||||||||.||.|||||||||||.|||||.||||.||||.||   ||.||.||.||.||.||.|
Sbjct  885  CAAGACAGAGGAAGACATCCTGCGGGCAGCACTGAAGTACAGCAGCAAGAAG---GGCAGCAACCCCACGTCCG  955

Query  653  CCTCTGATGATTCCAATGGGCTGGAGTGGGAAAATGATTTTGTTAGTGCCGAAATGGATGATAATGGAAATTCC  726
            ||||.|||||.|||||.||||||||||||||.||.||.|||||.||||||||.|||||.||.||.||.||.||.
Sbjct  956  CCTCGGATGACTCCAACGGGCTGGAGTGGGAGAACGACTTTGTCAGTGCCGAGATGGACGACAACGGCAACTCT  1029

Query  727  GAGTATTCTGGATTTGTAAATCCTGTATTAGAACTGTCTGATTCTGGCATAAGGCATTCTGACACAGATCAACA  800
            |||||.||.||.|||||.||.|||||.|||||||||||.|||||||.|||.|.|||.|||||.|||||.||.||
Sbjct 1030  GAGTACTCCGGGTTTGTGAACCCTGTGTTAGAACTGTCGGATTCTGCCATCAAGCAGTCTGATACAGACCAGCA  1103

Query  801  GACTCGG-  807
            || ||.| 
Sbjct 1104  GA-TCCGA  1110

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