Nucleotide Global Alignment

Description

• Query: ccsbBroad304_08533
• Subject: XM_006501244.2
• Aligned Length: 944
• Identities: 669
• Gaps: 151

Alignment

Query   1  -----ATGGGGAACTGCTGGTGGACGCAGTGCTTCGGACTGCTTCGCAAGGAAGCGGGGCGGCTGCAGCGAGTA  69
                ||||||||||||||.||||||||.||||||||.|||||.|||..|||||||||.||||||||||||   
Sbjct   1  ATGCGATGGGGAACTGCTGCTGGACGCAATGCTTCGGGCTGCTCCGCCGGGAAGCGGGTCGGCTGCAGCGA---  71

Query  70  GGCGGCGGCGGAG-------------------------------GATCCAAGTATTTTAGAACATGCTCAAGAG  112
            |||  |||||||                               ||||.|||||||||||.||||||.||||||
Sbjct  72  -GCG--GGCGGAGGGTTGCTGTACAGTTGCCCATCCTTGCTTCAGATCAAAGTATTTTAGGACATGCCCAAGAG  142

Query 113  GTGAGCACTTAACAATAGAGTTTGAGAATCTAGTAGAAAGTGATGAAGGGGAGAGCCCAGGAAGCAGTCATAGG  186
           |.||||||||.||.||||||||||||||.||.||.||.||||||||.||||||||||||||||||||.||||||
Sbjct 143  GAGAGCACTTGACCATAGAGTTTGAGAACCTCGTGGAGAGTGATGAGGGGGAGAGCCCAGGAAGCAGCCATAGG  216

Query 187  CCTCTTACTGAGGAAGAAATTGTTGACCTA-AGAGAAAGGCATTATGATTCCATTGCCGAAAAACAAAAAGATC  259
           ||.||.|||||.||.|||||.|.||||.|| || ||..|||||||||||||.|||||.|||||.||.||||||.
Sbjct 217  CCACTCACTGAAGACGAAATCGCTGACTTACAG-GAGCGGCATTATGATTCTATTGCAGAAAAGCAGAAAGATG  289

Query 260  TTGATAAGAAAATTCA---------------AAAA---------------------------------------  279
           |.||||.||||||.||               |.||                                       
Sbjct 290  TGGATAGGAAAATCCAGAGGCAGTTAGCCTTACAAGAGGAGAAGTTAAGACTAGAAGAGGAGGCTTTATACGCT  363

Query 280  ---------------------------------------------GAGCAAGAAAGGCAGAGAATTGTGCAGCA  308
                                                        ||||||||||.|||||||.|||..|||||
Sbjct 364  GCCCAGCGTGAAGCAGCCAGGGCAGCAAGGCAGCGGAAGCTCCTGGAGCAAGAAAAGCAGAGAGTTGCTCAGCA  437

Query 309  ATATCATCCTTCCAACAATGGAGAATATCAAAGTTCAGGACCAGAAGATGACTTCGAATCTTGTTTGAGAAATA  382
           .|||||   ||.||.||.||||||.|||||||||.||||||||||.||.|||||.|||||||..||.|||||.|
Sbjct 438  CTATCA---TTGCAGCAGTGGAGACTATCAAAGTGCAGGACCAGAGGACGACTTTGAATCTTCCTTAAGAAACA  508

Query 383  TGAAGTCACAGTATGAAGTTTTTCGAAGTAGTAGACTCTCATCAGATGCTACAGTTTTGACACCAAATACAGAA  456
           |.|||||||||||||||||.|||||.||.|||||||||||.||.||.||.|||||..||||||||||.||.||.
Sbjct 509  TAAAGTCACAGTATGAAGTGTTTCGGAGCAGTAGACTCTCCTCTGACGCCACAGTGCTGACACCAAACACCGAG  582

Query 457  AGCAGTTGTGATTTAATGACCAAAACTAAATCAACTAGTGGAAATGACGACAGCACATCCTTAGATCTAGAGTG  530
           |||||.|||||..|.|||||||||||.||||||||.||||||||||||||||||||.||||||||.||||||||
Sbjct 583  AGCAGCTGTGACCTGATGACCAAAACCAAATCAACGAGTGGAAATGACGACAGCACCTCCTTAGACCTAGAGTG  656

Query 531  GGAAGATGAAGAAGGAATGAATAGAATGCTTCCAATGAGAGAACGTTCCAAAACAGAGGAAGACATTCTACGGG  604
           |||||||||||||||||||||.||.|||||.||.|||||.||.||.|||||.||||||||||||||.||.||||
Sbjct 657  GGAAGATGAAGAAGGAATGAACAGGATGCTGCCCATGAGGGAGCGCTCCAAGACAGAGGAAGACATCCTGCGGG  730

Query 605  CAGCACTTAAGTATAGCAACAAGGAGACTGGAAGTAATCCTACATCAGCCTCTGATGATTCCAATGGGCTGGAG  678
           |||||||.|||||.||||.||||.||   ||.||.||.||.||.||.|||||.|||||.|||||.|||||||||
Sbjct 731  CAGCACTGAAGTACAGCAGCAAGAAG---GGCAGCAACCCCACGTCCGCCTCGGATGACTCCAACGGGCTGGAG  801

Query 679  TGGGAAAATGATTTTGTTAGTGCCGAAATGGATGATAATGGAAATTCCGAGTATTCTGGATTTGTAAATCCTGT  752
           |||||.||.||.|||||.||||||||.|||||.||.||.||.||.||.|||||.||.||.|||||.||.|||||
Sbjct 802  TGGGAGAACGACTTTGTCAGTGCCGAGATGGACGACAACGGCAACTCTGAGTACTCCGGGTTTGTGAACCCTGT  875

Query 753  ATTAGAACTGTCTGATTCTGGCATAAGGCATTCTGACACAGATCAACAGACTCGG-  807
           .|||||||||||.|||||||.|||.|.|||.|||||.|||||.||.|||| ||.| 
Sbjct 876  GTTAGAACTGTCGGATTCTGCCATCAAGCAGTCTGATACAGACCAGCAGA-TCCGA  930