Nucleotide Global Alignment

Description

• Query: ccsbBroad304_08533
• Subject: XM_006501247.2
• Aligned Length: 909
• Identities: 513
• Gaps: 291

Alignment

Query   1  ATGGGGAACTGCTGGTGGACGCAGTGCTTCGGACTGCTTCGCAAGGAAGCGGGGCGGCTGCAGCGAGTAGGCGG  74
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query  75  CGGCGGAGGATCCAAGTATTTTAGAACATGCTCAAGAGGTGAGCACTTAACAATAGAGTTTGAGAATCTAGTAG  148
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query 149  AAAGTGATGAAGGGGAGAGCCCAGGAAGCAGTCAT-AGGCCTCTTACTGAGGAAGAAATTGTTGACCTA-AGAG  220
                                            || |||||.||.|||||.||.|||||.|.||||.|| || |
Sbjct   1  ---------------------------------ATGAGGCCACTCACTGAAGACGAAATCGCTGACTTACAG-G  40

Query 221  AAAGGCATTATGATTCCATTGCCGAAAAACAAAAAGATCTTGATAAGAAAATTCA---------------AAAA  279
           |..|||||||||||||.|||||.|||||.||.||||||.|.||||.||||||.||               |.||
Sbjct  41  AGCGGCATTATGATTCTATTGCAGAAAAGCAGAAAGATGTGGATAGGAAAATCCAGAGGCAGTTAGCCTTACAA  114

Query 280  --------------------------------------------------------------------------  279
                                                                                     
Sbjct 115  GAGGAGAAGTTAAGACTAGAAGAGGAGGCTTTATACGCTGCCCAGCGTGAAGCAGCCAGGGCAGCAAGGCAGCG  188

Query 280  ----------GAGCAAGAAAGGCAGAGAATTGTGCAGCAATATCATCCTTCCAACAATGGAGAATATCAAAGTT  343
                     ||||||||||.|||||||.|||..|||||.|||||   ||.||.||.||||||.|||||||||.
Sbjct 189  GAAGCTCCTGGAGCAAGAAAAGCAGAGAGTTGCTCAGCACTATCA---TTGCAGCAGTGGAGACTATCAAAGTG  259

Query 344  CAGGACCAGAAGATGACTTCGAATCTTGTTTGAGAAATATGAAGTCACAGTATGAAGTTTTTCGAAGTAGTAGA  417
           ||||||||||.||.|||||.|||||||..||.|||||.||.|||||||||||||||||.|||||.||.||||||
Sbjct 260  CAGGACCAGAGGACGACTTTGAATCTTCCTTAAGAAACATAAAGTCACAGTATGAAGTGTTTCGGAGCAGTAGA  333

Query 418  CTCTCATCAGATGCTACAGTTTTGACACCAAATACAGAAAGCAGTTGTGATTTAATGACCAAAACTAAATCAAC  491
           |||||.||.||.||.|||||..||||||||||.||.||.|||||.|||||..|.|||||||||||.||||||||
Sbjct 334  CTCTCCTCTGACGCCACAGTGCTGACACCAAACACCGAGAGCAGCTGTGACCTGATGACCAAAACCAAATCAAC  407

Query 492  TAGTGGAAATGACGACAGCACATCCTTAGATCTAGAGTGGGAAGATGAAGAAGGAATGAATAGAATGCTTCCAA  565
           .||||||||||||||||||||.||||||||.|||||||||||||||||||||||||||||.||.|||||.||.|
Sbjct 408  GAGTGGAAATGACGACAGCACCTCCTTAGACCTAGAGTGGGAAGATGAAGAAGGAATGAACAGGATGCTGCCCA  481

Query 566  TGAGAGAACGTTCCAAAACAGAGGAAGACATTCTACGGGCAGCACTTAAGTATAGCAACAAGGAGACTGGAAGT  639
           ||||.||.||.|||||.||||||||||||||.||.|||||||||||.|||||.||||.||||.||   ||.||.
Sbjct 482  TGAGGGAGCGCTCCAAGACAGAGGAAGACATCCTGCGGGCAGCACTGAAGTACAGCAGCAAGAAG---GGCAGC  552

Query 640  AATCCTACATCAGCCTCTGATGATTCCAATGGGCTGGAGTGGGAAAATGATTTTGTTAGTGCCGAAATGGATGA  713
           ||.||.||.||.|||||.|||||.|||||.||||||||||||||.||.||.|||||.||||||||.|||||.||
Sbjct 553  AACCCCACGTCCGCCTCGGATGACTCCAACGGGCTGGAGTGGGAGAACGACTTTGTCAGTGCCGAGATGGACGA  626

Query 714  TAATGGAAATTCCGAGTATTCTGGATTTGTAAATCCTGTATTAGAACTGTCTGATTCTGGCATAAGGCATTCTG  787
           .||.||.||.||.|||||.||.||.|||||.||.|||||.|||||||||||.|||||||.|||.|.|||.||||
Sbjct 627  CAACGGCAACTCTGAGTACTCCGGGTTTGTGAACCCTGTGTTAGAACTGTCGGATTCTGCCATCAAGCAGTCTG  700

Query 788  ACACAGATCAACAGACTCGG-  807
           |.|||||.||.|||| ||.| 
Sbjct 701  ATACAGACCAGCAGA-TCCGA  720