Nucleotide Global Alignment

Description

• Query: ccsbBroad304_08587
• Subject: XM_011543510.3
• Aligned Length: 1608
• Identities: 989
• Gaps: 588

Alignment

Query    1  ATGGAGCATCGCATCGTGGGGCCCGGGCCGTACCGAGCTACCAGGCTGTGGAATGAGACCGTGGAGCTTTTTCG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGAGCATCGCATCGTGGGGCCCGGGCCGTACCGAGCTACCAGGCTGTGGAATGAGACCGTGGAGCTTTTTCG  74

Query   75  TGCTAAGATGCCGTTACGGAAACATCGCTGTCGTTTCAAGAGCTATGAGCATTGTTTCACAGCGGCCGAAGCTG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TGCTAAGATGCCGTTACGGAAACATCGCTGTCGTTTCAAGAGCTATGAGCATTGTTTCACAGCGGCCGAAGCTG  148

Query  149  TGGATTGGCTGCATGAGCTGCTGAGGTGCAGTCAAAACTTCGGCCCTGAAGTGACCCGCAAACAAACGGTCCAG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGGATTGGCTGCATGAGCTGCTGAGGTGCAGTCAAAACTTCGGCCCTGAAGTGACCCGCAAACAAACGGTCCAG  222

Query  223  CTGCTAAAAAAATTCCTGAAGAATCACGTTATTGAAGACATCAAGGGAAAATGGGGTGAGGAAGATTTTGAAGA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CTGCTAAAAAAATTCCTGAAGAATCACGTTATTGAAGACATCAAGGGAAAATGGGGTGAGGAAGATTTTGAAGA  296

Query  297  CAATCGTCACTTATACAGATTTCCTCCTTCTTCACCCCTGAAACCATATCCAAAGAAGCCCCCAAACCAAAAGG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CAATCGTCACTTATACAGATTTCCTCCTTCTTCACCCCTGAAACCATATCCAAAGAAGCCCCCAAACCAAAAGG  370

Query  371  ATGTTATTAAATTTCCAGAATGGAATGATCTCCCACCAGGCACTTCACAAGAGAACATCCCAGTGAGGCCAGTT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ATGTTATTAAATTTCCAGAATGGAATGATCTCCCACCAGGCACTTCACAAGAGAACATCCCAGTGAGGCCAGTT  444

Query  445  GTGATGAATTCTGAGATGTGGTACAAGCGTCACAGTATTGCAATTGGAGAGGTGCCAGCTTGCCGTCTTGTCCA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GTGATGAATTCTGAGATGTGGTACAAGCGTCACAGTATTGCAATTGGAGAGGTGCCAGCTTGCCGTCTTGTCCA  518

Query  519  CCGCAGACAGCTGACAGAGGCCAATGTAGAAGAGATATGGAAGTCTATGACATTATCATACTTACAGAAAATTC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CCGCAGACAGCTGACAGAGGCCAATGTAGAAGAGATATGGAAGTCTATGACATTATCATACTTACAGAAAATTC  592

Query  593  TTGGCCTGGATTCCTTAGAAGAAGTTTTAGACGTCAAACTTGTCAATTCGAAGTTCATCATCCATAATGTATAT  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TTGGCCTGGATTCCTTAGAAGAAGTTTTAGACGTCAAACTTGTCAATTCGAAGTTCATCATCCATAATGTATAT  666

Query  667  AGTGTTAGCAAGCAGGGAGTTGTTATTCTTGATGACAAGTCAAAAGAACTTCCTCATTGGGTGCTGTCAGCTAT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AGTGTTAGCAAGCAGGGAGTTGTTATTCTTGATGACAAGTCAAAAGAACTTCCTCATTGGGTGCTGTCAGCTAT  740

Query  741  GAAGTGTTTGGCAAATTGGCCCAACTGTTCTGATTTGAAGCAGCCTATGTACTTGGGATTTGAAAAAGATGTCT  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GAAGTGTTTGGCAAATTGGCCCAACTGTTCTGATTTGAAGCAGCCTATGTACTTGGGATTTGAAAAAGATGTCT  814

Query  815  TTAAAACCATAGCTGATTACTATGGTCACTTGAAAGAGCCTCTACTTACATTTCATCTTTTTGATGCTTTTGTC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TTAAAACCATAGCTGATTACTATGGTCACTTGAAAGAGCCTCTACTTACATTTCATCTTTTTGATGCTTTTGTC  888

Query  889  AGTGTACTGGGTTTG--TTACAGAAGGAGAAAGT-------GGCAGTTGAAG---------CATTTCAGATTTG  944
            ||||||||||.|.||  ||.||.|.|      ||       ||.||.||.||         ||  |||..|.||
Sbjct  889  AGTGTACTGGATCTGGTTTCCACATG------GTCCTTGCAGGGAGCTGGAGAGTCCTCCCCA--TCACTTATG  954

Query  945  CTGCCTTCTCCTACCTCCTGAAAATAGGAGAAAGTTACAGCTATTGATGATGATGATGGCAAGGATTTGCTTAA  1018
            ||            ||||.|||             |.|| ||.|.|.|.|         ||.|.|.|||     
Sbjct  955  CT------------CTCCAGAA-------------TCCA-CTCTGGGTCA---------CATGAAGTTG-----  988

Query 1019  ACAAAGAGATGCCACCCCTGTGTG---ATGGCTTTGGTACCCGAACACTGATGGTTCAGACATTTTCCCGTTGC  1089
            ||||            |.||||.|   |||.|.||  |.||.||     ||      |||.||.||||    .|
Sbjct  989  ACAA------------CGTGTGGGAACATGTCATT--TCCCTGA-----GA------AGAAATCTTCC----TC  1033

Query 1090  ATCTTGTGTTCCAAGGATGAAGTGGACTTGGATGAGTTATTAGCTGCTAGATTGGTAACGTTTCTGATGGACAA  1163
            || ||.||.                                                                 
Sbjct 1034  AT-TTCTGC-----------------------------------------------------------------  1041

Query 1164  TTACCAGGAAATTCTGAAACTCCCTTTGGCCTTGCAGACCTCTATAGAGGAGCGTGTGGCTCATCTACGAAGAG  1237
                                                                                      
Sbjct 1042  --------------------------------------------------------------------------  1041

Query 1238  TCCAGATAAAATACCCAGGAGCTGATATGGATATCACTTTATCTGCTCCATCATTTTGCCGTCAAATTAGTCCA  1311
                                                                                      
Sbjct 1042  --------------------------------------------------------------------------  1041

Query 1312  GAGGAATTTGAATATCAAAGATCATATGGCTCTCAGGAACCTCTGGCAGCCTTGTTGGAGGAAGTCATAACAGA  1385
                                                                                      
Sbjct 1042  --------------------------------------------------------------------------  1041

Query 1386  TGCCAAACTCTCCAACAAAGAGAAAAAGAAGAAACTGAAGCAGTTTCAGAAATCCTATCCTGAAGTCTATCAAG  1459
                                                                                      
Sbjct 1042  --------------------------------------------------------------------------  1041

Query 1460  AACGATTTCCTACACCAGAAAGTGCAGCACTTCTGTTTCCTGAAAAACCCAAACCGAAACCACAGCTGCTAATG  1533
                                                                                      
Sbjct 1042  --------------------------------------------------------------------------  1041

Query 1534  TGGGCACTAAAGAAGCCTTTCCAACCATTTCAAAGAACTAGAAGTTTTCGAATG  1587
                                                                  
Sbjct 1042  ------------------------------------------------------  1041