Nucleotide Global Alignment

Description

• Query: ccsbBroad304_08587
• Subject: XM_017009629.2
• Aligned Length: 1597
• Identities: 969
• Gaps: 617

Alignment

Query    1  ATGGAGCATCGCATCGTGGGGCCCGGGCCGTACCGAGCTACCAGGCTGTGGAATGAGACCGTGGAGCTTTTTCG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGAGCATCGCATCGTGGGGCCCGGGCCGTACCGAGCTACCAGGCTGTGGAATGAGACCGTGGAGCTTTTTCG  74

Query   75  TGCTAAGATGCCGTTACGGAAACATCGCTGTCGTTTCAAGAGCTATGAGCATTGTTTCACAGCGGCCGAAGCTG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TGCTAAGATGCCGTTACGGAAACATCGCTGTCGTTTCAAGAGCTATGAGCATTGTTTCACAGCGGCCGAAGCTG  148

Query  149  TGGATTGGCTGCATGAGCTGCTGAGGTGCAGTCAAAACTTCGGCCCTGAAGTGACCCGCAAACAAACGGTCCAG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGGATTGGCTGCATGAGCTGCTGAGGTGCAGTCAAAACTTCGGCCCTGAAGTGACCCGCAAACAAACGGTCCAG  222

Query  223  CTGCTAAAAAAATTCCTGAAGAATCACGTTATTGAAGACATCAAGGGAAAATGGGGTGAGGAAGATTTTGAAGA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CTGCTAAAAAAATTCCTGAAGAATCACGTTATTGAAGACATCAAGGGAAAATGGGGTGAGGAAGATTTTGAAGA  296

Query  297  CAATCGTCACTTATACAGATTTCCTCCTTCTTCACCCCTGAAACCATATCCAAAGAAGCCCCCAAACCAAAAGG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CAATCGTCACTTATACAGATTTCCTCCTTCTTCACCCCTGAAACCATATCCAAAGAAGCCCCCAAACCAAAAGG  370

Query  371  ATGTTATTAAATTTCCAGAATGGAATGATCTCCCACCAGGCACTTCACAAGAGAACATCCCAGTGAGGCCAGTT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ATGTTATTAAATTTCCAGAATGGAATGATCTCCCACCAGGCACTTCACAAGAGAACATCCCAGTGAGGCCAGTT  444

Query  445  GTGATGAATTCTGAGATGTGGTACAAGCGTCACAGTATTGCAATTGGAGAGGTGCCAGCTTGCCGTCTTGTCCA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GTGATGAATTCTGAGATGTGGTACAAGCGTCACAGTATTGCAATTGGAGAGGTGCCAGCTTGCCGTCTTGTCCA  518

Query  519  CCGCAGACAGCTGACAGAGGCCAATGTAGAAGAGATATGGAAGTCTATGACATTATCATACTTACAGAAAATTC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CCGCAGACAGCTGACAGAGGCCAATGTAGAAGAGATATGGAAGTCTATGACATTATCATACTTACAGAAAATTC  592

Query  593  TTGGCCTGGATTCCTTAGAAGAAGTTTTAGACGTCAAACTTGTCAATTCGAAGTTCATCATCCATAATGTATAT  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TTGGCCTGGATTCCTTAGAAGAAGTTTTAGACGTCAAACTTGTCAATTCGAAGTTCATCATCCATAATGTATAT  666

Query  667  AGTGTTAGCAAGCAGGGAGTTGTTATTCTTGATGACAAGTCAAAAGAACTTCCTCATTGGGTGCTGTCAGCTAT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AGTGTTAGCAAGCAGGGAGTTGTTATTCTTGATGACAAGTCAAAAGAACTTCCTCATTGGGTGCTGTCAGCTAT  740

Query  741  GAAGTGTTTGGCAAATTGGCCCAACTGTTCTGATTTGAAGCAGCCTATGTACTTGGGATTTGAAAAAGATGTCT  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GAAGTGTTTGGCAAATTGGCCCAACTGTTCTGATTTGAAGCAGCCTATGTACTTGGGATTTGAAAAAGATGTCT  814

Query  815  TTAAAACCATAGCTGATTACTATGGTCACTTGAAAGAGCCTCTACTTACATTTCATCTTTTTGATGCTTTTGTC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TTAAAACCATAGCTGATTACTATGGTCACTTGAAAGAGCCTCTACTTACATTTCATCTTTTTGATGCTTTTGTC  888

Query  889  AGTGTACTGGGTTTGTTACAGAAGGAGAAAGTGGCAGTTGAAGCATTTCAGATTTGCTGCCTTCTCCTACC--T  960
            ||||||||||      .||..|||    |.|||      |||.||                   .||||||  |
Sbjct  889  AGTGTACTGG------CACTCAAG----ATGTG------GAATCA-------------------ACCTACCTGT  927

Query  961  CCTGAAAATAGGAGAAAGTTACAGCTATTGATGATGATGATGGCAAGGATTTGCTTAAACAAAGAGATGCCACC  1034
            ||       ||||       |||      |||||.|| ||               ||||.|||   |||     
Sbjct  928  CC-------AGGA-------ACA------GATGAAGA-GA---------------TAAAGAAA---ATG-----  957

Query 1035  CCTGTGTG-ATGGCTTTGGTACCCGAACACTGATGG-------TTCAGACATTTTCCCGTTGCATCTTGTGTTC  1100
             |.||||| ||               ||||.| |||       |||| .||                       
Sbjct  958  -CAGTGTGTAT---------------ACACAG-TGGAATGCTCTTCA-CCA-----------------------  990

Query 1101  CAAGGATGAAGTGGACTTGGATGAGTTATTAGCTGCTAGATTGGTAACGTTTCTGATGGACAATTACCAGGAAA  1174
                                                                                      
Sbjct  991  --------------------------------------------------------------------------  990

Query 1175  TTCTGAAACTCCCTTTGGCCTTGCAGACCTCTATAGAGGAGCGTGTGGCTCATCTACGAAGAGTCCAGATAAAA  1248
                                                                                      
Sbjct  991  --------------------------------------------------------------------------  990

Query 1249  TACCCAGGAGCTGATATGGATATCACTTTATCTGCTCCATCATTTTGCCGTCAAATTAGTCCAGAGGAATTTGA  1322
                                                                                      
Sbjct  991  --------------------------------------------------------------------------  990

Query 1323  ATATCAAAGATCATATGGCTCTCAGGAACCTCTGGCAGCCTTGTTGGAGGAAGTCATAACAGATGCCAAACTCT  1396
                                                                                      
Sbjct  991  --------------------------------------------------------------------------  990

Query 1397  CCAACAAAGAGAAAAAGAAGAAACTGAAGCAGTTTCAGAAATCCTATCCTGAAGTCTATCAAGAACGATTTCCT  1470
                                                                                      
Sbjct  991  --------------------------------------------------------------------------  990

Query 1471  ACACCAGAAAGTGCAGCACTTCTGTTTCCTGAAAAACCCAAACCGAAACCACAGCTGCTAATGTGGGCACTAAA  1544
                                                                                      
Sbjct  991  --------------------------------------------------------------------------  990

Query 1545  GAAGCCTTTCCAACCATTTCAAAGAACTAGAAGTTTTCGAATG  1587
                                                       
Sbjct  991  -------------------------------------------  990