Nucleotide Global Alignment

Description

• Query: ccsbBroad304_08597
• Subject: XM_006498402.3
• Aligned Length: 1471
• Identities: 1067
• Gaps: 278

Alignment

Query    1  ------------------------ATGCAGAAATCTACAAATTCTGATACTTCCGTGGAAACACTGAATTCTAC  50
                                    .||||||.|||||||||.|.|||.|..||..||||||.||||||||||.|
Sbjct    1  ATGGAGAAAAGGACAAGCTGCAGTGTGCAGACATCTACAAACTGTGACAACTCTCTGGAAATACTGAATTCTGC  74

Query   51  CCGCCAAGGCACAGGAGCTGTGCAAATGAGAATCAAAAATGCCAACAGCCACCATGACAGGCTCAGCCAAAGTA  124
            ||.|||||..||||||||||||||||||||||||||||||||||||||||||||.|||||||..|||||||.||
Sbjct   75  CCACCAAGCTACAGGAGCTGTGCAAATGAGAATCAAAAATGCCAACAGCCACCAAGACAGGCAGAGCCAAACTA  148

Query  125  AATCCATGATCCTCACCGATGTCGGGAAGGTCACTGAACCTATATCCAGACACAGAAGGAATCATTCACAGCAT  198
            |||||||||||||||||||||..||||||||||||||||||||.|||.|.||||||||||||||||||||||||
Sbjct  149  AATCCATGATCCTCACCGATGCTGGGAAGGTCACTGAACCTATTTCCCGGCACAGAAGGAATCATTCACAGCAT  222

Query  199  ATCTTGAAAGATGTCATTCCTCCATTGGAACAACTGATGGTTGAAAAAGAAGGTTATCTGCAAAAAGCTAAAAT  272
            .|.|||||||||||||||||.|||.|.|||||.|..|||||||||||||||||.|||||.||||||||.|||||
Sbjct  223  GTGTTGAAAGATGTCATTCCACCACTAGAACATCCAATGGTTGAAAAAGAAGGGTATCTTCAAAAAGCCAAAAT  296

Query  273  TGCAGATGGAGGAAAGAAACTAAGGAAAAACTGGTCTACTTCCTGGATTGTTCTTTCTAGTCGAAGAATTGAAT  346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||.||||||||
Sbjct  297  TGCAGATGGAGGAAAGAAACTAAGGAAAAACTGGTCTACTTCCTGGATTGTTCTTTCTGGTCGAAAAATTGAAT  370

Query  347  TTTACAAAGAATCCAAGCAACAGGCTCTGTCC-AATATGAAAACTGGGCACAAACCAGAAAGTGTGGATTTGTG  419
            ||||||||||.||||||||.||.||||| ||| ||.||||||||..|||||||....|||||||||||||||||
Sbjct  371  TTTACAAAGACTCCAAGCAGCAAGCTCT-TCCTAACATGAAAACCAGGCACAACGTGGAAAGTGTGGATTTGTG  443

Query  420  TGGAGCACACATTGAATGGGCCAAGGAAAAATCGAGCAGAAAGAATGTCTTTCAGATCACAACAGTATCAGGAA  493
            |||.|||||.||.|||||||||||.||||||||.||||||||||.|||||||||||||||||||||.|||||||
Sbjct  444  TGGTGCACATATAGAATGGGCCAAAGAAAAATCAAGCAGAAAGAGTGTCTTTCAGATCACAACAGTGTCAGGAA  517

Query  494  ATGAGTTCCTTCTACAGTCAGATATTGACTTCATCATATTGGATTGGTTCCACGCTATCAAAAATGCAATTGAC  567
            ||||||||||||||||||||||||||||||||.|||||||||||||||||||.|||||||||||||||||||||
Sbjct  518  ATGAGTTCCTTCTACAGTCAGATATTGACTTCCTCATATTGGATTGGTTCCAAGCTATCAAAAATGCAATTGAC  591

Query  568  AGATTGCCAAAGGATTCAAGTTGTCCATCAAGAAACCTGGAATTATTCAAAATCCAAAGATCCTCTAGCACTGA  641
            ||||||||||||.||.||||||||...||      ||||||.||.|||||..|.||.||||||||.||..||||
Sbjct  592  AGATTGCCAAAGAATCCAAGTTGTGGGTC------CCTGGAGTTGTTCAATTTGCAGAGATCCTCAAGTTCTGA  659

Query  642  ATTGCTAAGTCACTACGACAGTGATATAAAAGAACAGAAACCAGAGCACAGAAAATCTTTAATGTTCAGACTGC  715
            |.|||..|||||||.|.|||..||||.||||||||||||||||||.|||||.||.||.||.|||||..||||||
Sbjct  660  ACTGCCGAGTCACTGCCACATCGATAGAAAAGAACAGAAACCAGAACACAGGAAGTCCTTCATGTTTCGACTGC  733

Query  716  ATCACAGTGCTTCCGATACAAGCGACAAAAATCGAGTTAAAAGCAGATTAAAGAAGTTTATTACCCGAAGACCT  789
            |.|||||||||||.||||||||.|||||.|||||.||.||.||||||.|.||||||||.||..||.||||||||
Sbjct  734  ACCACAGTGCTTCTGATACAAGTGACAAGAATCGCGTGAAGAGCAGACTGAAGAAGTTCATCTCCAGAAGACCT  807

Query  790  TCCCTGAAAACTCTGCAAGAAAAAGGACTTATTAAAGATCAAATTTTTGGCTCTCATCTGCACAAAGTGTGTGA  863
            ||.|||||||||.||||.|||||.|||||.||||||||||||||||||||||||||||||||||.|||||||||
Sbjct  808  TCTCTGAAAACTTTGCAGGAAAAGGGACTCATTAAAGATCAAATTTTTGGCTCTCATCTGCACACAGTGTGTGA  881

Query  864  ACGTGAAAATTCCACAGTTCCGTGGTTTGTAAAGCAATGCATTGAAGCTGTTGAGAAAAGAGGTCTAGATGTTG  937
            |||.|||.|||||||||||||.||||||||||||||||||||||||||||||||.||||||||.|||||.||||
Sbjct  882  ACGAGAACATTCCACAGTTCCATGGTTTGTAAAGCAATGCATTGAAGCTGTTGAAAAAAGAGGCCTAGACGTTG  955

Query  938  ATGGAATATATCGAGTTAGTGGCAATCTGGCAACAATACAGAAGTTAAGATTTATTGTCAACCAAGAAGAGAAG  1011
            |||||||.||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct  956  ATGGAATTTATCGAGTTAGTGGCAATCTTGCAACAATACAGAAGTTAAGATTTATTGTCAACCAAGAAGAGAAG  1029

Query 1012  CTGAATTTGGACGACAGCCAGTGGGAGGACATCCACGTTGTCACCGGAGCACTGAAGATGTTTTTCCGGGAGCT  1085
            |||||||||||.||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 1030  CTGAATTTGGATGACAGCCAGTGGGAGGACATCCACGTCGTCACCGGAGCACTGAAGATGTTTTTCCGGGAGCT  1103

Query 1086  GCCTGAGCCGCTCTTCCCTTACAGTTTCTTTGAGCAGTTTGTGGAAGCGATCAAAAAGCAAGACAACAACACAA  1159
            |.||||.||||||||||||||||||||||||||||.|||||||||.|||||       ||.|.||||       
Sbjct 1104  GTCTGAACCGCTCTTCCCTTACAGTTTCTTTGAGCGGTTTGTGGAGGCGAT-------CAGGTCAAC-------  1163

Query 1160  GAATTGAAGC-TGTAAAATCTCTTGTACAAAAACTCCCTCCGCCAAATCGTGACACCATGAAAGTCC---CCTT  1229
                    || |||                  ||||||                        |||||   ||||
Sbjct 1164  --------GCGTGT------------------ACTCCC------------------------AGTCCCTGCCTT  1187

Query 1230  TGGACATCTAACTAAGATAGTG-----------GCCAAAG----CCTCCAA--GAACCTCATGTCCACGCAAAG  1286
              ||.||.|   |.||| |.||           |.|||||    |.|.|||  |||||                
Sbjct 1188  --GATATTT---TCAGA-ATTGCACTGTTTGCAGACAAAGAGATCTTGCAAGGGAACC----------------  1239

Query 1287  CTTGGGGATTGTATTTGGACCTACCCTTCTGCGAGCTGAAAATGAAACAGGAAACATGGCGATCCACATGGTCT  1360
                                                                                      
Sbjct 1240  --------------------------------------------------------------------------  1239

Query 1361  ACCAGAACCAGATAGCTGAGCTCATGCTGAGTGAGTACAGTAAGATCTTCGGCTCAGAGGAAGAC  1425
                                                                             
Sbjct 1240  -----------------------------------------------------------------  1239