Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08657
Subject:
XM_006515592.2
Aligned Length:
2269
Identities:
1634
Gaps:
371

Alignment

Query    1  ATGATGCCGT--------------------TTCCG-------------------GTGACAACCCAGGGACCACC  35
            |||..|||||                    |||||                   ||.|||||.||||||.|||.
Sbjct    1  ATGGCGCCGTCCAGCCCCCTAGTTCCCCACTTCCGCTTCCCTCGGAGCGGTCCAGTTACAACGCAGGGATCACA  74

Query   36  GCAGCCGGCGCCGCCGCCGAATCGCTACGGCGTCTCCTCGCCTATCAGTCTAGCGGTCCCCAAGGAGACGGACT  109
            .||..||..|||.||.|.||..|.|||.|||.|..||||.||||||||..||||||.||||||||||||.||||
Sbjct   75  ACAAACGCAGCCACCACAGAGGCACTATGGCATTACCTCTCCTATCAGCTTAGCGGCCCCCAAGGAGACTGACT  148

Query  110  GCCTCCTCACCCAGAGGCTAATAGAAACCCTCAGGCCCTTCGGGGTCTTCGAAGAGGAAGAGGAACTGCAGCGC  183
            ||||.|||||.||||.|||.||.||.||.||.|.||||||.|||||.||.|||||.||||||||||||||||||
Sbjct  149  GCCTACTCACACAGAAGCTCATCGAGACGCTGAAGCCCTTTGGGGTTTTTGAAGAAGAAGAGGAACTGCAGCGC  222

Query  184  AGGATTTTAGTTTTGGACAAATTAAATAATCTGGTAAAGGAATGGATACGCGAAATCAGTGAAAGCAAGAGTCT  257
            |||||||||.||||||..|||||||||||.|||||.||.||||||||.||.|||||||||||||||||||.|||
Sbjct  223  AGGATTTTAATTTTGGGAAAATTAAATAACCTGGTGAAAGAATGGATTCGAGAAATCAGTGAAAGCAAGAATCT  296

Query  258  TCCCCAGTCTGTAATTGAAAACGTTGGAGGAAAGATTTTTACGTTTGGCTCTTACAGATTAGGAGTACATACGA  331
            .||.||.||||||||||||||.||||||||.|||||||||||.|||||.|||||||||.|||||||.||.||||
Sbjct  297  CCCACAATCTGTAATTGAAAATGTTGGAGGGAAGATTTTTACATTTGGATCTTACAGACTAGGAGTCCACACGA  370

Query  332  AAGGCGCAGATATTGACGCCTTGTGCGTTGCACCAAGTCATGTGGATCGAAGCGACTTTTTCACCTCATTCTAT  405
            ||||.||.||||||||.||.|||||.|||||||||||.|||||.||||||||.|||||||||||||||||||||
Sbjct  371  AAGGTGCTGATATTGATGCGTTGTGTGTTGCACCAAGACATGTTGATCGAAGTGACTTTTTCACCTCATTCTAT  444

Query  406  GCTAAACTGAAACTACAGGAGGAAGTGAAAGATTTAAGGGCTGTCCAGGAGGCATTTGTGCCAGTTATCAAACT  479
            |.||||.|||||.||||.||.|||||||||||||||||.|||||..|.|||||||||||.||||||||||||||
Sbjct  445  GATAAATTGAAATTACAAGAAGAAGTGAAAGATTTAAGAGCTGTTGAAGAGGCATTTGTACCAGTTATCAAACT  518

Query  480  GTGTTTTGATGGGATAGAGATTGATATTTTATTTGCAAGATTAGCACTACAGACTATTCCAGAAGATTTGGACT  553
            .|||||||||||.|||||||||||||||||.|||||||||||||||||.||||||||||||||||||||||||.
Sbjct  519  CTGTTTTGATGGAATAGAGATTGATATTTTGTTTGCAAGATTAGCACTGCAGACTATTCCAGAAGATTTGGACC  592

Query  554  TAAGAGATGACAGTCTACTTAAAAATTTAGACATTAGATGCATAAGAATCCTTAATGGTTGCCGGGTAACCGAT  627
            ||.|||||||||||||.||||||||..||||.||.|||||||||||||.|||||||||||||.|||||||||||
Sbjct  593  TACGAGATGACAGTCTGCTTAAAAACCTAGATATAAGATGCATAAGAAGCCTTAATGGTTGCAGGGTAACCGAT  666

Query  628  GAAATTTTACATCTAGTGCCAAACATTGACAACTTCAGGCTGACTCTGAGAGCCATCAAACTGTGGGCCAAGTG  701
            |||||||||||||||||.|||||||||||||||||||||.|.|||||||||||||||||||||||||||||..|
Sbjct  667  GAAATTTTACATCTAGTACCAAACATTGACAACTTCAGGTTAACTCTGAGAGCCATCAAACTGTGGGCCAAACG  740

Query  702  CCACAATATCTATTCCAATATATTAGGTTTCCTCGGAGGTGTTTCCTGGGCCATGCTAGTAGCAAGAACTTGTC  775
            .|||||.|||||||||||||||||||||||||||||.||||||||||||||.||||||||||||||||||||.|
Sbjct  741  GCACAACATCTATTCCAATATATTAGGTTTCCTCGGTGGTGTTTCCTGGGCTATGCTAGTAGCAAGAACTTGCC  814

Query  776  AGCTTTATCCAAATGCAGTAGCGTCAACTCTTGTACGGAAATTCTTCTTGGTATTTTCAGAATGGGAATGGCCA  849
            |||||||||||||||||.||||.|||||||||||||..|||||.||||||||||||||..||||||||||||||
Sbjct  815  AGCTTTATCCAAATGCAATAGCATCAACTCTTGTACATAAATTTTTCTTGGTATTTTCTAAATGGGAATGGCCA  888

Query  850  AACCCAGTGTTACTGAAGGAGCCTGAAGAACGGAATCTTAATTTGCCTGTATGGGACCCAAGAGTAAATCCCAG  923
            ||.||||||.||.||||..|||||||||||.|.|||||||||||||||||.|||||||||||.|||||.|||||
Sbjct  889  AATCCAGTGCTATTGAAACAGCCTGAAGAATGCAATCTTAATTTGCCTGTGTGGGACCCAAGGGTAAACCCCAG  962

Query  924  TGATAGGTACCATCTTATGCCTATCATCACACCAGCATACCCACAGCAGAACTCCACATACAACGTGTCTATTT  997
            ||||||||||||||||||||||||.||.|||||||||||||||||||||||||||||.|||||.|||||..|||
Sbjct  963  TGATAGGTACCATCTTATGCCTATAATTACACCAGCATACCCACAGCAGAACTCCACGTACAATGTGTCCGTTT  1036

Query  998  CAACCAGGATGGTCATGATTGAGGAGTTTAAACAGGGGCTTGCTATCACACACGAGATTTTGCTAAGTAAGGCA  1071
            ||||..|||||||||||.||||||||||||||||.||.||||||||||||.|.||.||||||||.|||||||||
Sbjct 1037  CAACACGGATGGTCATGGTTGAGGAGTTTAAACAAGGTCTTGCTATCACAGATGAAATTTTGCTGAGTAAGGCA  1110

Query 1072  GAGTGGTCCAAACTCTTTGAAGCTCCAAGCTTCTTTCAAAAGTACAAGCATTATATTGTACTTCTGGCAAGTGC  1145
            ||||||||||||||.|||||||||||||.|||||||||.||||||||||||||||||||||||||.||||||||
Sbjct 1111  GAGTGGTCCAAACTTTTTGAAGCTCCAAACTTCTTTCAGAAGTACAAGCATTATATTGTACTTCTAGCAAGTGC  1184

Query 1146  ATCAACAGAAAAACAACATTTAGAATGGGTGGGCTTGGTGGAATCAAAGATCCGAATCCTGGTTGGGAGCTTGG  1219
            ..|.||.|||||.||.|.|.|.||||||||||||||||||||||||||.|||||.|||||||||||.|||||||
Sbjct 1185  GCCCACGGAAAAGCAGCGTCTGGAATGGGTGGGCTTGGTGGAATCAAAAATCCGCATCCTGGTTGGAAGCTTGG  1258

Query 1220  AGAAGAATGAATTTATTACACTGGCACATGTGAATCCACAGTCATTTCCAGCACCCAAAGAAAATCCTGATATG  1293
            ||||||||||.||||||||||||||.|||||||||||.||||||||||||||.||||||||||.||||||.|.|
Sbjct 1259  AGAAGAATGAGTTTATTACACTGGCTCATGTGAATCCCCAGTCATTTCCAGCCCCCAAAGAAAGTCCTGACAGG  1332

Query 1294  GAAGAATTTCGTACAATGTGGGTGATTGGGTTAGGGCTAAAAAAGCCAGATAATTCTGAAATTCTCAGCATTGA  1367
            |||||||||||.||||||||||||||||||||||.|.|.|||||..|.||.||.|||||||.||||||..|.||
Sbjct 1333  GAAGAATTTCGCACAATGTGGGTGATTGGGTTAGTGTTTAAAAAAACTGAAAACTCTGAAAATCTCAGTGTCGA  1406

Query 1368  TCTCACCTATGATATCCAGTCTTTCACAGATACTGTTTATAGGCAAGCAGTGAATAGTAAGATGTTTGAGATGG  1441
            .|||||||||||||||||||||||||||||.||.|||||||||||||||.|.||.||.||.|||||||||.|||
Sbjct 1407  CCTCACCTATGATATCCAGTCTTTCACAGACACAGTTTATAGGCAAGCAATAAACAGCAAAATGTTTGAGTTGG  1480

Query 1442  GTATGAAAATTACTGCAGTGCAT-TTAAGAAGAAAGGAACTTCACCAGCTGCTGCCTCATCATGTGCTTCAGGA  1514
            .||||||.|||.|.|||.||||| |.||| ||||||.||||.||.||||||||||||..|||.|||||||||  
Sbjct 1481  ATATGAAGATTGCAGCAATGCATGTGAAG-AGAAAGCAACTCCATCAGCTGCTGCCTAGTCACGTGCTTCAG--  1551

Query 1515  CAAGA--AAGCA-CACTCAACAGAAGGTAG--AAGATTGACAGATTTGAACGACAGCAGCTTTGACTTGTCTGC  1583
             ||||  |||.| ||.||||||||||| ||  ||| ||.||||.|.||||.|||||||||.|||||||||||..
Sbjct 1552  -AAGAGGAAGAAGCATTCAACAGAAGG-AGTCAAG-TTAACAGCTCTGAATGACAGCAGCCTTGACTTGTCTAT  1622

Query 1584  AGGCTGTGAAAACAGCATGTCTGTGCCTTCATCTACTAGCACTATGAAGACAGGCCCATTGATTA------GCA  1651
            .|.|.||||.|||||||||||||||||||||.|.||.||..||||||||||..|.|||||||.||      |||
Sbjct 1623  GGACAGTGATAACAGCATGTCTGTGCCTTCACCCACCAGTGCTATGAAGACCAGTCCATTGAATAGTTCTGGCA  1696

Query 1652  GTTCTCAGGGTAGAAACAGTCCTGCCTTGGCTGTAATGACAGCATCTGTGGCTAACATACAGGCTACTGAATTT  1725
            |.||.||||   |||||||||||||....|||||.|...|||||||||||.|.|.|||.||||||.||||..||
Sbjct 1697  GCTCCCAGG---GAAACAGTCCTGCTCCAGCTGTGACCGCAGCATCTGTGACCAGCATCCAGGCTTCTGAGGTT  1767

Query 1726  TCCTT---GCAA-CAGGTGAATACCAATGAAAGTTCAGGGGTTGCATTAAACGAAAGTATTCCTCACGCTGTCT  1795
            ||..|   |||| ||    |||.|||.||||||..||||||.|.|||..|.||||||.||||||||..|||.|.
Sbjct 1768  TCTGTACCGCAAGCA----AATTCCAGTGAAAGCCCAGGGGGTCCATCGAGCGAAAGCATTCCTCAAACTGCCA  1837

Query 1796  CTCAGCCTGCCATTTCTCCATCACCAAAGGCCATGGTCGCCAGAGTTGTTTCTTCAACATGTCTCAT-AAGCCA  1868
            |.|||||.||||||||||||.||||||||.|.|..|||.||||||||||.||.||||||.|.||..| ||.|||
Sbjct 1838  CACAGCCAGCCATTTCTCCACCACCAAAGCCTACAGTCTCCAGAGTTGTCTCCTCAACACGACTGGTAAACCCA  1911

Query 1869  T---CCAGACCTTCAGGAAACTCAGCAACAAACATATCTAATCCTA----------------------------  1911
            |   |.|||||||||||||||.||||||||||..|..|||||||||                            
Sbjct 1912  TCGCCTAGACCTTCAGGAAACACAGCAACAAAAGTCCCTAATCCTATAGTAGGAGTCAAGAGAACGTCCTCACC  1985

Query 1912  --------------------------------------------------------------------------  1911
                                                                                      
Sbjct 1986  CAATAAAGAAGAAAGTCCTAAGAAAACCAAAACAGAAGAGGATGAAACAAGTGAAGATGCTAACTGTCTTGCTT  2059

Query 1912  --------------------------------------------------------------------------  1911
                                                                                      
Sbjct 2060  TGAGTGGACATGATAAAACAGAGACAAAGGAACAAGTTGATCTGGAGACAAGTGCGGTTCAATCAGAAACTGTT  2133

Query 1912  --------------------------------------------------------------------------  1911
                                                                                      
Sbjct 2134  CCGGCATCGGCTTCTCTGTTGGCCTCTCAGAAAACATCCAGTACAGACCTTTCTGATATCCCTGCTCTCCCTGC  2207

Query 1912  -------------------------------------------------  1911
                                                             
Sbjct 2208  AAATCCTATTCCTGTTATCAAGAATTCAATAAAACTGAGACTGAATCGG  2256

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