Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08657
- Subject:
- XR_381486.2
- Aligned Length:
- 2085
- Identities:
- 981
- Gaps:
- 969
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGGCGCACGGGCGCCCCGGGCCGCGGCTTCCGGCCCCTCGGGCGCGGGGCCCCCGCAGGATCCCCAAGCGGAA 74
Query 1 -------------------------------------------------------------ATGATGCCGT--- 10
|||..|||||
Sbjct 75 CGGCGCCCGGCGCGGACTGGCGGGCCGCGGCTCCCGGGTTCCTTCCTGTCCCGGTTTCACCATGGCGCCGTCCA 148
Query 11 -----------------TTCCG-------------------GTGACAACCCAGGGACCACCGCAGCCGGCGCCG 48
||||| ||.|||||.||||||.|||..||..||..|||.
Sbjct 149 GCCCCCTAGTTCCCCACTTCCGCTTCCCTCGGAGCGGTCCAGTTACAACGCAGGGATCACAACAAACGCAGCCA 222
Query 49 CCGCCGAATCGCTACGGCGTCTCCTCGCCTATCAGTCTAGCGGTCCCCAAGGAGACGGACTGCCTCCTCACCCA 122
||.|.||..|.|||.|||.|..||||.||||||||..||||||.||||||||||||.||||||||.|||||.||
Sbjct 223 CCACAGAGGCACTATGGCATTACCTCTCCTATCAGCTTAGCGGCCCCCAAGGAGACTGACTGCCTACTCACACA 296
Query 123 GAGGCTAATAGAAACCCTCAGGCCCTTCGGGGTCTTCGAAGAGGAAGAGGAACTGCAGCGCAGGATTTTAGTTT 196
||.|||.||.||.||.||.|.||||||.|||||.||.|||||.|||||||||||||||||||||||||||.|||
Sbjct 297 GAAGCTCATCGAGACGCTGAAGCCCTTTGGGGTTTTTGAAGAAGAAGAGGAACTGCAGCGCAGGATTTTAATTT 370
Query 197 TGGACAAATTAAATAATCTGGTAAAGGAATGGATACGCGAAATCAGTGAAAGCAAGAGTCTTCCCCAGTCTGTA 270
|||..|||||||||||.|||||.||.||||||||.||.|||||||||||||||||||.|||.||.||.||||||
Sbjct 371 TGGGAAAATTAAATAACCTGGTGAAAGAATGGATTCGAGAAATCAGTGAAAGCAAGAATCTCCCACAATCTGTA 444
Query 271 ATTGAAAACGTTGGAGGAAAGATTTTTACGTTTGGCTCTTACAGATTAGGAGTACATACGAAAGGCGCAGATAT 344
||||||||.||||||||.|||||||||||.|||||.|||||||||.|||||||.||.||||||||.||.|||||
Sbjct 445 ATTGAAAATGTTGGAGGGAAGATTTTTACATTTGGATCTTACAGACTAGGAGTCCACACGAAAGGTGCTGATAT 518
Query 345 TGACGCCTTGTGCGTTGCACCAAGTCATGTGGATCGAAGCGACTTTTTCACCTCATTCTATGCTAAACTGAAAC 418
|||.||.|||||.|||||||||||.|||||.||||||||.||||||||||||||||||||||.||||.|||||.
Sbjct 519 TGATGCGTTGTGTGTTGCACCAAGACATGTTGATCGAAGTGACTTTTTCACCTCATTCTATGATAAATTGAAAT 592
Query 419 TACAGGAGGAAGTGAAAGATTTAAGGGCTGTCCAGGAGGCATTTGTGCCAGTTATCAAACTGTGTTTTGATGGG 492
||||.||.|||||||||||||||||.|||||..|.|||||||||||.||||||||||||||.|||||||||||.
Sbjct 593 TACAAGAAGAAGTGAAAGATTTAAGAGCTGTTGAAGAGGCATTTGTACCAGTTATCAAACTCTGTTTTGATGGA 666
Query 493 ATAGAGATTGATATTTTATTTGCAAGATTAGCACTACAGACTATTCCAGAAGATTTGGACTTAAGAGATGACAG 566
|||||||||||||||||.|||||||||||||||||.||||||||||||||||||||||||.||.||||||||||
Sbjct 667 ATAGAGATTGATATTTTGTTTGCAAGATTAGCACTGCAGACTATTCCAGAAGATTTGGACCTACGAGATGACAG 740
Query 567 TCTACTTAAAAATTTAGACATTAGATGCATAAGAATCCTTAATGGTTGCCGGGTAACCGATGAAATTTTACATC 640
|||.||||||||..||||.||.|||||||||||||.|||||||||||||.||||||||||||||||||||||||
Sbjct 741 TCTGCTTAAAAACCTAGATATAAGATGCATAAGAAGCCTTAATGGTTGCAGGGTAACCGATGAAATTTTACATC 814
Query 641 TAGTGCCAAACATTGACAACTTCAGGCTGACTCTGAGAGCCATCAAACTGTGGGCCAAGTGCCACAATATCTAT 714
||||.|||||||||||||||||||||.|.|||||||||||||||||||||||||||||..|.|||||.||||||
Sbjct 815 TAGTACCAAACATTGACAACTTCAGGTTAACTCTGAGAGCCATCAAACTGTGGGCCAAACGGCACAACATCTAT 888
Query 715 TCCAATATATTAGGTTTCCTCGGAGGTGTTTCCTGGGCCATGCTAGTAGCAAGAACTTGTCAGCTTTATCCAAA 788
|||||||||||||||||||||||.||||||||||||||.||||||||||||||||||||.||||||||||||||
Sbjct 889 TCCAATATATTAGGTTTCCTCGGTGGTGTTTCCTGGGCTATGCTAGTAGCAAGAACTTGCCAGCTTTATCCAAA 962
Query 789 TGCAGTAGCGTCAACTCTTGTACGGAAATTCTTCTTGGTATTTTCAGAATGGGAATGGCCAAACCCAGTGTTAC 862
||||.||||.|||||||||||||..|||||.||||||||||||||..||||
Sbjct 963 TGCAATAGCATCAACTCTTGTACATAAATTTTTCTTGGTATTTTCTAAATG----------------------- 1013
Query 863 TGAAGGAGCCTGAAGAACGGAATCTTAATTTGCCTGTATGGGACCCAAGAGTAAATCCCAGTGATAGGTACCAT 936
|||||.||||||||||||||||||
Sbjct 1014 --------------------------------------------------GTAAACCCCAGTGATAGGTACCAT 1037
Query 937 CTTATGCCTATCATCACACCAGCATACCCACAGCAGAACTCCACATACAACGTGTCTATTTCAACCAGGATGGT 1010
|||||||||||.||.|||||||||||||||||||||||||||||.|||||.|||||..|||||||..|||||||
Sbjct 1038 CTTATGCCTATAATTACACCAGCATACCCACAGCAGAACTCCACGTACAATGTGTCCGTTTCAACACGGATGGT 1111
Query 1011 CATGATTGAGGAGTTTAAACAGGGGCTTGCTATCACACACGAGATTTTGCTAAGTAAGGCAGAGTGGTCCAAAC 1084
||||.||||||||||||||||.||.||||||||||||.|.||.||||||||.||||||||||||||||||||||
Sbjct 1112 CATGGTTGAGGAGTTTAAACAAGGTCTTGCTATCACAGATGAAATTTTGCTGAGTAAGGCAGAGTGGTCCAAAC 1185
Query 1085 TCTTTGAAGCTCCAAGCTTCTTTCAAAAGTACAAGCATTATATTGTACTTCTGGCAAGTGCATCAACAGAAAAA 1158
|.|||||||||||||.|||||||||.||||||||||||||||||||||||||.||||||||..|.||.|||||.
Sbjct 1186 TTTTTGAAGCTCCAAACTTCTTTCAGAAGTACAAGCATTATATTGTACTTCTAGCAAGTGCGCCCACGGAAAAG 1259
Query 1159 CAACATTTAGAATGGGTGGGCTTGGTGGAATCAAAGATCCGAATCCTGGTTGGGAGCTTGGAGAAGAATGAATT 1232
||.|.|.|.||||||||||||||||||||||
Sbjct 1260 CAGCGTCTGGAATGGGTGGGCTTGGTGGAAT------------------------------------------- 1290
Query 1233 TATTACACTGGCACATGTGAATCCACAGTCATTTCCAGCACCCAAAGAAAATCCTGATATGGAAGAATTTCGTA 1306
Sbjct 1291 -------------------------------------------------------------------------- 1290
Query 1307 CAATGTGGGTGATTGGGTTAGGGCTAAAAAAGCCAGATAATTCTGAAATTCTCAGCATTGATCTCACCTATGAT 1380
Sbjct 1291 -------------------------------------------------------------------------- 1290
Query 1381 ATCCAGTCTTTCACAGATACTGTTTATAGGCAAGCAGTGAATAGTAAGATGTTTGAGATGGGTATGAAAATTAC 1454
Sbjct 1291 -------------------------------------------------------------------------- 1290
Query 1455 TGCAGTGCATTTAAGAAGAAAGGAACTTCACCAGCTGCTGCCTCATCATGTGCTTCAGGACAAGAAAGCACACT 1528
Sbjct 1291 -------------------------------------------------------------------------- 1290
Query 1529 CAACAGAAGGTAGAAGATTGACAGATTTGAACGACAGCAGCTTTGACTTGTCTGCAGGCTGTGAAAACAGCATG 1602
Sbjct 1291 -------------------------------------------------------------------------- 1290
Query 1603 TCTGTGCCTTCATCTACTAGCACTATGAAGACAGGCCCATTGATTAGCAGTTCTCAGGGTAGAAACAGTCCTGC 1676
Sbjct 1291 -------------------------------------------------------------------------- 1290
Query 1677 CTTGGCTGTAATGACAGCATCTGTGGCTAACATACAGGCTACTGAATTTTCCTTGCAACAGGTGAATACCAATG 1750
Sbjct 1291 -------------------------------------------------------------------------- 1290
Query 1751 AAAGTTCAGGGGTTGCATTAAACGAAAGTATTCCTCACGCTGTCTCTCAGCCTGCCATTTCTCCATCACCAAAG 1824
Sbjct 1291 -------------------------------------------------------------------------- 1290
Query 1825 GCCATGGTCGCCAGAGTTGTTTCTTCAACATGTCTCATAAGCCATCCAGACCTTCAGGAAACTCAGCAACAAAC 1898
Sbjct 1291 -------------------------------------------------------------------------- 1290
Query 1899 ATATCTAATCCTA 1911
Sbjct 1291 ------------- 1290
