Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08707
Subject:
XM_006499508.3
Aligned Length:
2210
Identities:
1935
Gaps:
55

Alignment

Query    1  ---------------------------------------------------ATGTTTGGGAAGAAAAAGAAAAA  23
                                                               |||||||||||||||||||||||
Sbjct    1  ATGAGGTACCGCGACTTCTCTGCTGACAGCCAGCCACCAGGTTTTTACATCATGTTTGGGAAGAAAAAGAAAAA  74

Query   24  GATTGAAATATCTGGCCCGTCCAACTTTGAACACAGGGTTCATACTGGGTTTGATGCACAAGAGCAGAAGTTTA  97
            |||.||||||||||||||.|||||||||||||||||||||||||||||.||||||.||||||||||||||||||
Sbjct   75  GATCGAAATATCTGGCCCATCCAACTTTGAACACAGGGTTCATACTGGATTTGATCCACAAGAGCAGAAGTTTA  148

Query   98  CCGGCCTTCCCCAGCAGTGGCACAGCCTGTTAGCAGATACGGCCAACAGGCCAAAGCCTATGGTGGACCCTTCA  171
            |.|||||||||||||||||||||||||||||||||||.||.|||||||||||.|||||.|||||||||||.|||
Sbjct  149  CTGGCCTTCCCCAGCAGTGGCACAGCCTGTTAGCAGACACAGCCAACAGGCCCAAGCCCATGGTGGACCCATCA  222

Query  172  TGCATCACACCCATCCAGCTGGCTCCTATGAAGACAATCGTTAGAGGAAACAAACCCTGCAAGGAAACCTCCAT  245
            ||||||||||||||.|||||||||||.||||||||||||||.||||||||.|||.||||||||||||||||.||
Sbjct  223  TGCATCACACCCATACAGCTGGCTCCCATGAAGACAATCGTCAGAGGAAATAAATCCTGCAAGGAAACCTCTAT  296

Query  246  CAACGGCCTGCTAGAGGATTTTGACAACATCTCGGTGACTCGCTCCAACTCCCTAAGGAAAGAAAGCCCACCCA  319
            |||.||.||||||||||||||||||||||||||.|||||||||||||||||.||||||||||||||||||||||
Sbjct  297  CAATGGTCTGCTAGAGGATTTTGACAACATCTCCGTGACTCGCTCCAACTCTCTAAGGAAAGAAAGCCCACCCA  370

Query  320  CCCCAGATCAGGGAGCCTCCAGCCACGGTCCAGGCCACGCGGAAGAAAATGGCTTCATCACCTTCTCCCAGTAT  393
            ||||||||||||||||..|.||||.|..||.|||||||.|||||||.||.|||||||||||.|||||.||.|||
Sbjct  371  CCCCAGATCAGGGAGCAGCTAGCCGCATTCAAGGCCACTCGGAAGAGAACGGCTTCATCACTTTCTCACAATAT  444

Query  394  TCCAGCGAATCCGATACTACTGCTGACTACACGACCGAAAAGTACAGGGAGAAGAGTCTCTATGGAGATGATCT  467
            |||||.|||||||||||.|||||.||||||||.||.|||||||||||.||.|.||||||||||||||||||.||
Sbjct  445  TCCAGTGAATCCGATACGACTGCGGACTACACAACTGAAAAGTACAGAGACAGGAGTCTCTATGGAGATGACCT  518

Query  468  GGATCCGTATTATAGAGGCAGCCACGCAGCCAAGCAAAATGGGCACGTAATGAAAATGAAGCACGGGGAGGCCT  541
            |||||.|||.||||.|.|||||||.||||||||||||||||||||.|..|||||.|||||.||.||.||.||.|
Sbjct  519  GGATCTGTACTATAAAAGCAGCCATGCAGCCAAGCAAAATGGGCATGCCATGAAGATGAAACATGGAGACGCTT  592

Query  542  ACTATTCTGAGGTGAAGCCTTTGAAATCCGATTTTGCCAGATTTTCTGCCGATTATCACTCACATTTGGACTCA  615
            ||||..|||||.|||||.||||||||.||||..|.|||.||||..|||.|||.||||||.|.||.||||||||.
Sbjct  593  ACTACCCTGAGATGAAGTCTTTGAAAACCGACCTGGCCGGATTCCCTGTCGACTATCACACCCACTTGGACTCT  666

Query  616  CTGAGCAAACCAAGTGAATACAGTGACCTCAAGTGGGAGTATCAGAGAGCCTCGAGTAGCTCCCCTCTGGATTA  689
            |||||.|||.||||||||||..|||||||.|.||||||.||||||||||||||.|||||||||||||||||.||
Sbjct  667  CTGAGAAAATCAAGTGAATATGGTGACCTTAGGTGGGATTATCAGAGAGCCTCTAGTAGCTCCCCTCTGGACTA  740

Query  690  TTCATTCCAATTCACACCTTCTAGAACTGCAGGGACCAGCGGGTGCTCCAAGGAGAGCCTGGCGTACAGTGAAA  763
            .||||||||..||||.||||||||||||||||||||||||.||||||||||||||||.|||||.||||||||||
Sbjct  741  CTCATTCCAGCTCACGCCTTCTAGAACTGCAGGGACCAGCAGGTGCTCCAAGGAGAGTCTGGCATACAGTGAAA  814

Query  764  GTGAATGGGGACCCAGCCTGGATGACTATGACAGGAGGCCAAAGTCTTCGTACCTGAATCAGACAAGCCCTCAG  837
            ||||.||||||||||||||||||||||||||||||||||||||.||.||.||||||.|||||||.|||||||||
Sbjct  815  GTGATTGGGGACCCAGCCTGGATGACTATGACAGGAGGCCAAAATCATCATACCTGCATCAGACGAGCCCTCAG  888

Query  838  CCCACCATGCGGCAGAGGTCCAGGTCAGGCTCGGGACTCCAGGAACCGATGATGCCATTTGGAGCAAGTGCATT  911
            ||..|||||||.|||||.||||.|||.|||||.||.||.||||||||.||||||||||||||||||||||||||
Sbjct  889  CCAGCCATGCGCCAGAGATCCAAGTCCGGCTCAGGGCTTCAGGAACCCATGATGCCATTTGGAGCAAGTGCATT  962

Query  912  TAAAACCCATCCCCAAGGACACTCCTACAACTCCTACACCTACCCTCGCTTGTCCGAGCCCACAATGTGCATTC  985
            ||||||.|||||.|||||||||||.|||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct  963  TAAAACTCATCCTCAAGGACACTCGTACAACTCCTACACCTACCCTCGATTGTCCGAGCCCACAATGTGCATTC  1036

Query  986  CAAAGGTGGATTACGATCGAGCACAGATGGTCCTCAGCCCTCCACTGTCAGGGTCTGACACCTACCCCAGGGGC  1059
            ||||||||||||||||||||||||||||||||.||||.|||||||||||||||||.|||||.||||||||.|||
Sbjct 1037  CAAAGGTGGATTACGATCGAGCACAGATGGTCTTCAGTCCTCCACTGTCAGGGTCCGACACTTACCCCAGAGGC  1110

Query 1060  CCTGCCAAACTACCTCAAAGTCAAAGCAAATCGGGCTATTCCTCAAGCAGTCACCAGTACCCGTCTGGGTACCA  1133
            ||..||||||||||||||||||||||||||.|.|||||.||.|||.||||.|||||||||||.|||||||||||
Sbjct 1111  CCCACCAAACTACCTCAAAGTCAAAGCAAAGCAGGCTACTCTTCAGGCAGCCACCAGTACCCTTCTGGGTACCA  1184

Query 1134  CAAAGCCACCT-TGTACCATCACCCCTCCCTGCAGAGCAGTTCGCAGTACATCTCCACGGCTTCCTACCTGAGC  1206
            ||||| ||.|| |.|||||.||.||.||||||||.|.||||||.||||||||||||||.|||||.|||.|.|||
Sbjct 1185  CAAAG-CATCTCTATACCACCATCCATCCCTGCAAACCAGTTCTCAGTACATCTCCACCGCTTCTTACTTAAGC  1257

Query 1207  TACCTCAGCCTCTCATCCAGCACCTACCCGCCGCCCAGCTGGGGCTCCTCCTCCGACCAGCAGCCCTCCAGGGT  1280
            |..|||||..||||.||.|||||||||||.||.||.|||||||||||||||||.||||||||||||||.|||||
Sbjct 1258  TCTCTCAGTATCTCCTCGAGCACCTACCCTCCACCTAGCTGGGGCTCCTCCTCAGACCAGCAGCCCTCAAGGGT  1331

Query 1281  GTCCCATGAACAGTTTCGGGCGGCCCTGCAGCTGGTGGTCAGCCCAGGAGACCCCAGGGAATACTTGGCCAACT  1354
            .|||||||||||.||.||.||.||||||||.||||||||||||||||||||||||||||||||.||||..||||
Sbjct 1332  ATCCCATGAACAATTCCGAGCTGCCCTGCAACTGGTGGTCAGCCCAGGAGACCCCAGGGAATATTTGGATAACT  1405

Query 1355  TTATCAAAATCGGGGAAGGCTCAACCGGCATCGTATGCATCGCCACCGAGAAACACACAGGGAAACAAGTTGCA  1428
            ||||.||||||||.|||||.||.||.||||||||.|||||.||.||.||||||||||||||.||.|||||.|||
Sbjct 1406  TTATTAAAATCGGAGAAGGGTCGACAGGCATCGTGTGCATTGCAACAGAGAAACACACAGGCAAGCAAGTGGCA  1479

Query 1429  GTGAAGAAAATGGACCTCCGGAAGCAACAGAGACGAGAACTGCTTTTCAATGAGGTCGTGATCATGCGGGATTA  1502
            ||||||||||||||||||||.|||||.||||||||.|||||.|||||.||||||||||||||.|||||.|||||
Sbjct 1480  GTGAAGAAAATGGACCTCCGAAAGCAGCAGAGACGGGAACTCCTTTTTAATGAGGTCGTGATAATGCGTGATTA  1553

Query 1503  CCACCATGACAATGTGGTTGACATGTACAGCAGCTACCTTGTCGGCGATGAGCTCTGGGTGGTCATGGAGTTTC  1576
            ||||||||||||.||.|||||||||||||.||||||||||||.||.||||||||||||||||||||||||||||
Sbjct 1554  CCACCATGACAACGTAGTTGACATGTACAACAGCTACCTTGTTGGAGATGAGCTCTGGGTGGTCATGGAGTTTC  1627

Query 1577  TAGAAGGTGGTGCCTTGACAGACATTGTGACTCACACCAGAATGAATGAAGAACAGATAGCTACTGTCTGCCTG  1650
            ||||||||||||||||||||||||||||.|||||.|||||||||||||||||.|||||||||||||||||||||
Sbjct 1628  TAGAAGGTGGTGCCTTGACAGACATTGTCACTCATACCAGAATGAATGAAGAGCAGATAGCTACTGTCTGCCTG  1701

Query 1651  TCAGTTCTGAGAGCTCTCTCCTACCTTCATAACCAAGGAGTGATTCACAGGGACATAAAAAGTGACTCCATCCT  1724
            ||||||||||.||||||.|||||||||||||||||||||||||||||||||||||||||.|||||||||||.||
Sbjct 1702  TCAGTTCTGAAAGCTCTGTCCTACCTTCATAACCAAGGAGTGATTCACAGGGACATAAAGAGTGACTCCATTCT  1775

Query 1725  CCTGACAAGCGATGGCCGGATAAAGTTGTCTGATTTTGGTTTCTGTGCTCAAGTTTCCAAAGAGGTGCCGAAGA  1798
            .||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||.||||
Sbjct 1776  TCTGACAAGCGATGGCCGGATAAAGTTATCTGACTTTGGTTTCTGTGCTCAAGTTTCCAAAGAGGTGCCAAAGA  1849

Query 1799  GGAAATCATTGGTTGGCACTCCCTACTGGATGGCCCCTGAGGTGATTTCTAGGCTACCTTATGGGACAGAGGTG  1872
            ||||.|||.||||.||.||.||.|||||||||||.||||||||||||||.||||||||||||||||||||||||
Sbjct 1850  GGAAGTCACTGGTGGGTACCCCATACTGGATGGCACCTGAGGTGATTTCCAGGCTACCTTATGGGACAGAGGTG  1923

Query 1873  GACATCTGGTCCCTCGGGATCATGGTGATAGAAATGATTGATGGCGAGCCCCCCTACTTCAATGAGCCTCCCCT  1946
            ||||||||||||||||||||.|||||||||||.|||||||||||.|||||||||||.||||||||||||||.||
Sbjct 1924  GACATCTGGTCCCTCGGGATAATGGTGATAGAGATGATTGATGGGGAGCCCCCCTATTTCAATGAGCCTCCTCT  1997

Query 1947  CCAGGCGATGCGGAGGATCCGGGACAGTTTACCTCCAAGAGTGAAGGACCTACACAAGGTTTCTTCAGTGCTCC  2020
            .|||||.|||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||..||||||
Sbjct 1998  GCAGGCCATGAGGAGGATCCGGGACAGTTTACCTCCAAGAGTGAAGGACCTACACAAGGTTTCTTCCATGCTCC  2071

Query 2021  GGGGATTCCTAGA-CTTGATGTTGGTGAGGGAGCCCTCTCAGAGAGCAACAGCCCAGGAACTCCTCGGACATCC  2093
            |.||||||||||| ||| |||||||||||||||||||||||.|||||.|||||.||.||||||||.||||||||
Sbjct 2072  GAGGATTCCTAGATCTT-ATGTTGGTGAGGGAGCCCTCTCAAAGAGCCACAGCTCAAGAACTCCTTGGACATCC  2144

Query 2094  ATTCTTAAAACTAGCAGGTCCACCGTCTTGCATTGTCCCCCTCATGAGACAATACAGGCATCAC  2157
            ||||||||||.|.|||||||||||.|||||||||||.||.|||||||||||||||||.||||||
Sbjct 2145  ATTCTTAAAATTGGCAGGTCCACCATCTTGCATTGTTCCTCTCATGAGACAATACAGACATCAC  2208

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