Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08733
- Subject:
- XM_006500650.3
- Aligned Length:
- 2807
- Identities:
- 1402
- Gaps:
- 1183
Alignment
Query 1 ATGAC-GGATCCTTTCTGCGTT---GGAGGCCGTCGGCTCCCGGGGTCCAGCAAGAGTGGTCCCGGGAAGGATG 70
||||| |.||||||| ||.||| ||||||||||||||.|..||.||||||||.|||||.||.||.||||..|
Sbjct 1 ATGACTGAATCCTTT-TGTGTTGGAGGAGGCCGTCGGCTTCAAGGATCCAGCAAAAGTGGACCTGGAAAGGGAG 73
Query 71 GCAGCCGAAAGGAGGTCCGACTTCCAATGCTGCATGACCCACCGAAGATGGGGATGCCGGTGGTCCGTGGTGGA 144
|||||||.|||||||.||.||||||..||.||||.||||||||.|||.|.||||||||.|||||||...|||||
Sbjct 74 GCAGCCGGAAGGAGGCCCAACTTCCCTTGTTGCAGGACCCACCAAAGCTAGGGATGCCAGTGGTCCACAGTGGA 147
Query 145 CAGACAGTGCCCGGCCAGGCCCCTCTCTGCTTTGACCCGGGAAGTCCAGCCAGTGACAAGACAGAAGGGAAGAA 218
||.||||||||..||||||||||.||||||||||||||.||||...||||||||||||||||||||||||||||
Sbjct 148 CATACAGTGCCTAGCCAGGCCCCACTCTGCTTTGACCCTGGAAACTCAGCCAGTGACAAGACAGAAGGGAAGAA 221
Query 219 AAAGGGGCGGCCAAAAGCCGAGAACCAGGCCCTCCGAGACATTCCTCTCTCCCTGATGAACGACTGGAAGGATG 292
|||.|||.||||.||||||||||||||.||.||||||||.|||||||||||.|||||||||.|.|||||.||||
Sbjct 222 AAAAGGGAGGCCGAAAGCCGAGAACCAAGCTCTCCGAGATATTCCTCTCTCTCTGATGAACCAGTGGAAAGATG 295
Query 293 AGTTCAAGGCACACTCGAGGGTGAAGTGTCCAAACTCAGGGTGCTGGCTGGAGTTCCCCAGCATCTACGGGCTC 366
|.||||||||||||||.||||||||||||||||||||||||||||||||.|||||||||||||||||.||||||
Sbjct 296 AATTCAAGGCACACTCAAGGGTGAAGTGTCCAAACTCAGGGTGCTGGCTAGAGTTCCCCAGCATCTATGGGCTC 369
Query 367 AAGTACCATTACCAGCGGTGCCAAGG------------------------------------------------ 392
||||||||.||.||||||||||||||
Sbjct 370 AAGTACCACTATCAGCGGTGCCAAGGGGTAAGGGGCTGTGGGCCAGGGAAGAGGAGGCCTGGGGGTGCATCTGG 443
Query 393 ---------------------------------------------GGGTGCCATCTCAGATCGCCTGGCCTTCC 421
||||||.|||||||||.|.||||||||||
Sbjct 444 GCAGAGGCCCCCGGGGCCCCATCCCACACCTGCCCTCCCTGCCCAGGGTGCTATCTCAGATAGGCTGGCCTTCC 517
Query 422 CCTGCCCCTTCTGCGAGGCCGCATTCACCTCTAAGACCCAGCTGGAGAAACACCGGATCTGGAACCACATGGAC 495
|.||||||||||||||||||||||||||.||.|||||||||||||||||.||||||||.|||||.|||||||||
Sbjct 518 CTTGCCCCTTCTGCGAGGCCGCATTCACTTCCAAGACCCAGCTGGAGAAGCACCGGATATGGAATCACATGGAC 591
Query 496 CGACCCCTGCCTGCCTCCAAGCCTGGGCCCA-TCAGCAGGCCGGTCACCATCAGCCGGCCTGTTGGGGTCAGCA 568
|..|||||.||||||.|||||||| |||||| |||||.||||||||||||||||||||||||||||||||||||
Sbjct 592 CACCCCCTACCTGCCCCCAAGCCT-GGCCCAGTCAGCCGGCCGGTCACCATCAGCCGGCCTGTTGGGGTCAGCA 664
Query 569 AGCCCATCGGAGTGAGCAAACCTGTCACTATTGGCAAACCTGTGGGTGTCAGCAAACCCATTGGCATCAGCAAG 642
|||||||||||||||||||||||||.|||.||||||||||.||||||||||||||.||||||||||||||.|||
Sbjct 665 AGCCCATCGGAGTGAGCAAACCTGTTACTGTTGGCAAACCAGTGGGTGTCAGCAAGCCCATTGGCATCAGTAAG 738
Query 643 CCAGTCTCGGTCGGCAGACCAATGCCAGTCACCAAGGCCATCCCGGTCACTAGGCCCGTGCCAGTCACCAAACC 716
|||| ||.|.||||.||||||..|.||||||||||||||
Sbjct 739 CCAG------------------------------------TCACAGTCAGTAGGCCTATACCAGTCACCAAACC 776
Query 717 TGTCACAGTCAGCAGGCCCATGCCCGTCACCAAGGCC-ATGCCGGTCACCAAACCCATCACAGTCACCAAGTCT 789
||||||||||||.||||||||||..||| .|.||||| .||||.||||||||.||||||.||.|.|||||..||
Sbjct 777 TGTCACAGTCAGTAGGCCCATGCAAGTC-TCTAGGCCTGTGCCAGTCACCAAGCCCATCCCAATTACCAAACCT 849
Query 790 GTGCCGGTCACCAAACCCGTACCTGTCACCAAACCCATTACGGTCACAAAGCTTGTGACAGTTACGAAACCCGT 863
|||||..|||||||||...|.||.||.||| |||||||||||||||.|.|||||.||
Sbjct 850 GTGCCACTCACCAAACATATGCCAGTTACC------------------AAGCTTGTGACAGTTTCAAAACCTGT 905
Query 864 GCCGGTCACCAAGCCAGTGACAGTCAGCAGGCCCATTGTGGTCAGCAAGCCGGTGACAGTCAGCAGGCCCATTG 937
|||..|||||||||||||..|||||||||||||||||||||||||||||||.|||.|.||||||||||||||.|
Sbjct 906 GCCACTCACCAAGCCAGTACCAGTCAGCAGGCCCATTGTGGTCAGCAAGCCTGTGCCGGTCAGCAGGCCCATCG 979
Query 938 CTATCAGCAGACACACACCGCCCTGCAAAATGGTGCTGCTGACCAGGTCGGAGAACAAAGCACCTCGTGCCACA 1011
|.|||||||||||||.|||.|||||||||||||||.|||||.|||..||.|||||||||.|||.||||||.|||
Sbjct 980 CCATCAGCAGACACATACCACCCTGCAAAATGGTGTTGCTGTCCAAATCTGAGAACAAAACACTTCGTGCTACA 1053
Query 1012 GGGAGGAACAGTGGTAAGAAAAGGGCTGCGGACAGCCTGGACACCTGCCCAATTCCACCCAAGCAGGCCAGGCC 1085
||.|.||||||...|||||||||||||||.|||||..|||||||||||||.||.|...||||||||||.|||||
Sbjct 1054 GGCAAGAACAGCAATAAGAAAAGGGCTGCAGACAGTTTGGACACCTGCCCCATCCTGTCCAAGCAGGCAAGGCC 1127
Query 1086 AGAGAATGGGGAGTACGGCCCCTCCTCCATGGGCCAGAGCTCGGCCTTCCAGCTGAGTGCAGACACCAGCAGTG 1159
|||||||||.|..||||||||.|||..|||||.||||||...|.||||||..||||||.||||..|.|||
Sbjct 1128 AGAGAATGGAGCATACGGCCCATCCAGCATGGACCAGAGTGTGACCTTCCCACTGAGTACAGATCCTAGC---- 1197
Query 1160 GCTCCTTGTCGCCAGGCAGCAGGCCGTCAGG--GGGCATGGAGGCACTGAAGGCTGCAGGCCCTGCGTCCCCGC 1231
||||||||||| |..| |||||..|||||||||..|.||..||||||.|.|||||.||
Sbjct 1198 --------------GGCAGCAGGCC--CCTGATGGGCAAAGAGGCACTGCGGCCTATAGGCCCAGTGTCCCAGC 1255
Query 1232 CTGAGGAGGACCCGGAGCGCACAAAGCACAGAAGGAAACAGAAAACACCCAAAAAGTTTACAGGGGAGCAGCCA 1305
|.|||||.|||||.|||||||||||||||||||||||||||||||||||.||.||.||.|||||||||||.|||
Sbjct 1256 CCGAGGAAGACCCTGAGCGCACAAAGCACAGAAGGAAACAGAAAACACCGAAGAAATTCACAGGGGAGCAACCA 1329
Query 1306 TCCATCTCAGGGACCTTTGGGCTCAAAGGCCTGGTCAAAGCTGAGGACAAGGCCCGAGTTCACCGCTCCAAGAA 1379
||.|||||||||||||||||||||||||||||||.|||||||||.||||||||.||||||||.|||||||||||
Sbjct 1330 TCTATCTCAGGGACCTTTGGGCTCAAAGGCCTGGCCAAAGCTGAAGACAAGGCTCGAGTTCATCGCTCCAAGAA 1403
Query 1380 GCAGGAGGGGCCAGGCCCTGAGGACGCCCGGAAGAAGGTGCCAGCTGCCCCAATCACTGTCAGCAAGGAGGCAC 1453
|||.|||||..|||||.|||||||.|..|||||||||||||..||..||||..|||||||||||||||||||||
Sbjct 1404 GCAAGAGGGATCAGGCTCTGAGGAAGTGCGGAAGAAGGTGCTGGCCACCCCTGTCACTGTCAGCAAGGAGGCAC 1477
Query 1454 CGGCCCCTGTGGCCCACCCAGCTC------------------------------CAGGTGGCCCTGAAGAGCAG 1497
|..|.||||||||.||||||||.| ||||||||||.||.||||||
Sbjct 1478 CAACTCCTGTGGCTCACCCAGCCCCAGGTGGGGGCTGCCTGGCAGGACCCAGGACAGGTGGCCCGGAGGAGCAG 1551
Query 1498 TGGCAGAGGGCCATCCATGAGCGCGGGGAAGCCGTCTGCCCCACCTGCAACGTGGTCACCCGGAAGACTCTCGT 1571
||||||.|.|||||||||||.||.|||||.||.|||||||||||||||||||||||.|||||||||||.|||||
Sbjct 1552 TGGCAGCGAGCCATCCATGAACGGGGGGAGGCTGTCTGCCCCACCTGCAACGTGGTTACCCGGAAGACCCTCGT 1625
Query 1572 GGGGCTCAAGAAGCACATGGAGGTGTGTCAGAAGCTTCAGGATGCACTCAAGTGCCAGCACTGCCGGAAGCAGT 1645
|||.|||||.|||||||||||.||.|||||.|||.|.|||||.||||||||.||.|||||||||||.||.||.|
Sbjct 1626 GGGACTCAAAAAGCACATGGAAGTATGTCACAAGTTGCAGGAAGCACTCAAATGTCAGCACTGCCGAAAACAAT 1699
Query 1646 TCAAGTCCAAAGCCGGCCTCAACTACCACACTATGGCCGAGCACAGTGCCAAGCCCTCTGACGCCGAGGCCTCC 1719
||||||||||.||.|||||||||||||||||.|||||.||.||||||||||||..|
Sbjct 1700 TCAAGTCCAAGGCTGGCCTCAACTACCACACCATGGCTGAACACAGTGCCAAGGTC------------------ 1755
Query 1720 GAAGGGGGCGAGCAGGAGGAGCGCGAGAGGCTGCGCAAGGTGCTGAAGCAGATGGGACGGCTGCGCTGCCCCCA 1793
Sbjct 1756 -------------------------------------------------------------------------- 1755
Query 1794 GGAGGGTTGCGGGGCTGCCTTCTCCAGCCTCATGGGCTACCAGTACCACCAGCGGCGCTGCGGGAAGCCGCCCT 1867
Sbjct 1756 -------------------------------------------------------------------------- 1755
Query 1868 GCGAGGTGGACAGCCCCTCCTTCCCCTGCACCCACTGTGGCAAGACGTACCGATCCAAGGCTGGCCACGACTAC 1941
Sbjct 1756 -------------------------------------------------------------------------- 1755
Query 1942 CACGTGCGCTCGGAGCACACGGCCCCCCCCCCTGAGGAGCCCACAGACAAGTCCCCTGAGGCTGAGGACCCGCT 2015
Sbjct 1756 -------------------------------------------------------------------------- 1755
Query 2016 GGGTGTGGAGCGGACCCCAAGCGGGCGTGTCCGCCGCACGTCGGCCCAGGTGGCGGTGTTCCACCTGCAGGAGA 2089
Sbjct 1756 -------------------------------------------------------------------------- 1755
Query 2090 TAGCGGAGGACGAGCTGGCCCGCGACTGGACCAAGCGGCGCATGAAGGATGACCTTGTGCCCGAGACCGCACGG 2163
Sbjct 1756 -------------------------------------------------------------------------- 1755
Query 2164 CTCAACTACACTCGACCAGGGCTCCCCACGCTGAACCCCCAGCTGCTAGAGGCATGGAAGAATGAAGTGAAGGA 2237
Sbjct 1756 -------------------------------------------------------------------------- 1755
Query 2238 GAAAGGCCACGTCAACTGTCCCAACGACTGCTGTGAAGCCATCTACTCCAGCGTGTCCGGACTCAAGGCTCATC 2311
Sbjct 1756 -------------------------------------------------------------------------- 1755
Query 2312 TCGCCAGCTGCAGTAAGGGGGCCCACCTGGCAGGGAAGTACCGCTGTCTGCTGTGTCCGAAGGAGTTCAGTTCT 2385
Sbjct 1756 -------------------------------------------------------------------------- 1755
Query 2386 GAGAGTGGCGTCAAATACCACATCCTGAAGACCCACGCAGAGAACTGGTTCCGAACATCAGCAGACCCACCTCC 2459
Sbjct 1756 -------------------------------------------------------------------------- 1755
Query 2460 CAAACACAGGAGCCAGGACTCATTGGTGCCCAAGAAGGAAAAGAAGAAAAATCTGGCAGGTGGAAAGAAGCGGG 2533
Sbjct 1756 -------------------------------------------------------------------------- 1755
Query 2534 GCCGAAAGCCCAAGGAGCGGACCCCAGAGGAGCCTGTGGCCAAGCTGCCCCCGCGCCGGGACGACTGGCCTCCA 2607
Sbjct 1756 -------------------------------------------------------------------------- 1755
Query 2608 GGATGCAGAGACAAGGGGGCCCGGGGCTCCACCGGCCGGAAGGTGGGAGTCAGCAAGGCGCCTGAAAAG 2676
Sbjct 1756 --------------------------------------------------------------------- 1755
