Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08779
Subject:
NM_001370215.1
Aligned Length:
1647
Identities:
1466
Gaps:
180

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCTGCTCAGCTGCTGACTGATGAGGCACTGGAATCAGTGACGTTCAGGGATGTGACTGTGGACTTCACCCA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAGGAGTGGCAGCAGCTGGAGCCTGCCCAGAAGGACCTGTACAGGGATGTCATGCTGGAGAACTACAGGAACC  148

Query    1  --------------------------------ATGAAAGAGTTGGATCCAAAGAATGACATTTCGGAAGACAAG  42
                                            ||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGGTCTCACTGGACTGGGAGACTAGACCTGAAATGAAAGAGTTGGATCCAAAGAATGACATTTCGGAAGACAAG  222

Query   43  CTCTCCGTTGTTGGGGAGGCCACGGGGGGACCCACGAGGAATGGTGCCAGGGGTCCTGGCTCAGAAGGAGTGTG  116
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CTCTCCGTTGTTGGGGAGGCCACGGGGGGACCCACGAGGAATGGTGCCAGGGGTCCTGGCTCAGAAGGAGTGTG  296

Query  117  GGAACCAGGCAGCTGGCCAGAGAGGCCGCGGGGAGATGCAGGTGCAGAGTGGGAGCCATTGGGAATTCCCCAGG  190
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGAACCAGGCAGCTGGCCAGAGAGGCCGCGGGGAGATGCAGGTGCAGAGTGGGAGCCATTGGGAATTCCCCAGG  370

Query  191  GGAACAAACTCTTAGGGGGCTCAGTACCCGCATGTCATGAACTGAAGGCATTTGCCAACCAAGGCTGTGTCCTG  264
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GGAACAAACTCTTAGGGGGCTCAGTACCCGCATGTCATGAACTGAAGGCATTTGCCAACCAAGGCTGTGTCCTG  444

Query  265  GTCCCACCACGGCTGGACGACCCCACAGAAAAGGGGGCCTGTCCACCCGTAAGGCGTGGCAAGAACTTCTCCAG  338
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GTCCCACCACGGCTGGACGACCCCACAGAAAAGGGGGCCTGTCCACCCGTAAGGCGTGGCAAGAACTTCTCCAG  518

Query  339  CACTTCAGACCTCAGTAAGCCCCCCATGCCCTGCGAGGAGAAGAAAACCTACGACTGCAGCGAGTGTGGCAAGG  412
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CACTTCAGACCTCAGTAAGCCCCCCATGCCCTGCGAGGAGAAGAAAACCTACGACTGCAGCGAGTGTGGCAAGG  592

Query  413  CCTTTAGCCGAAGCTCGTCCCTGATAAAGCACCAAAGGATCCACACGGGAGAAAAGCCGTTTGAGTGTGACACC  486
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCTTTAGCCGAAGCTCGTCCCTGATAAAGCACCAAAGGATCCACACGGGAGAAAAGCCGTTTGAGTGTGACACC  666

Query  487  TGTGGGAAGCACTTCATCGAGCGCTCGTCCCTCACCATCCACCAGCGGGTGCACACGGGCGAGAAGCCCTATGC  560
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TGTGGGAAGCACTTCATCGAGCGCTCGTCCCTCACCATCCACCAGCGGGTGCACACGGGCGAGAAGCCCTATGC  740

Query  561  CTGCGGGGACTGCGGCAAGGCCTTCAGCCAGCGCATGAACCTCACTGTGCACCAGCGCACGCACACGGGCGAGA  634
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CTGCGGGGACTGCGGCAAGGCCTTCAGCCAGCGCATGAACCTCACTGTGCACCAGCGCACGCACACGGGCGAGA  814

Query  635  AGCCGTATGTGTGCGACGTGTGTGGCAAGGCCTTCCGGAAGACTTCCTCTCTCACCCAGCACGAGCGGATCCAC  708
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AGCCGTATGTGTGCGACGTGTGTGGCAAGGCCTTCCGGAAGACTTCCTCTCTCACCCAGCACGAGCGGATCCAC  888

Query  709  ACGGGGGAGAAGCCCTACGCGTGCGGGGACTGCGGCAAGGCCTTCAGCCAGAACATGCACCTCATCGTGCACCA  782
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  ACGGGGGAGAAGCCCTACGCGTGCGGGGACTGCGGCAAGGCCTTCAGCCAGAACATGCACCTCATCGTGCACCA  962

Query  783  GCGCACGCACACCGGGGAGAAGCCGTACGTGTGCCCCGAGTGCGGGCGAGCCTTCAGCCAGAACATGCACCTGA  856
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GCGCACGCACACCGGGGAGAAGCCGTACGTGTGCCCCGAGTGCGGGCGAGCCTTCAGCCAGAACATGCACCTGA  1036

Query  857  CCGAGCACCAGCGCACGCACACCGGGGAGAAGCCGTACGCCTGCAAGGAGTGCGGCAAGGCCTTCAACAAGAGC  930
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CCGAGCACCAGCGCACGCACACCGGGGAGAAGCCGTACGCCTGCAAGGAGTGCGGCAAGGCCTTCAACAAGAGC  1110

Query  931  TCCTCTCTCACCCTGCACCAGAGGAACCACACCGGCGAGAAGCCCTACGTGTGCGGCGAGTGCGGCAAGGCCTT  1004
            |||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TCCTCGCTCACCCTGCACCAGAGGAACCACACCGGCGAGAAGCCCTACGTGTGCGGCGAGTGCGGCAAGGCCTT  1184

Query 1005  CAGCCAGAGCTCCTACCTCATCCAGCACCAGCGCTTCCACATCGGCGTGAAGCCGTTCGAGTGCAGCGAGTGCG  1078
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CAGCCAGAGCTCCTACCTCATCCAGCACCAGCGCTTCCACATCGGCGTGAAGCCGTTCGAGTGCAGCGAGTGCG  1258

Query 1079  GCAAGGCCTTCAGCAAGAACTCCTCGCTCACGCAGCACCAGCGCATCCACACCGGCGAGAAGCCCTACGAGTGC  1152
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  GCAAGGCCTTCAGCAAGAACTCCTCGCTCACGCAGCACCAGCGCATCCACACCGGCGAGAAGCCCTACGAGTGC  1332

Query 1153  TACATCTGCAAGAAGCACTTCACGGGGCGCTCGTCCCTCATCGTGCACCAGATCGTGCACACCGGGGAGAAGCC  1226
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  TACATCTGCAAGAAGCACTTCACGGGGCGCTCGTCCCTCATCGTGCACCAGATCGTGCACACCGGGGAGAAGCC  1406

Query 1227  CTACGTGTGCGGCGAGTGCGGCAAGGCCTTCAGCCAGAGCGCCTACCTCATCGAGCACCAGCGGATCCACACCG  1300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  CTACGTGTGCGGCGAGTGCGGCAAGGCCTTCAGCCAGAGCGCCTACCTCATCGAGCACCAGCGGATCCACACCG  1480

Query 1301  GCGAGAAGCCGTACAGGTGCGGCCAGTGCGGGAAGTCCTTCATCAAGAACTCCTCCCTCACTGTGCACCAGCGG  1374
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  GCGAGAAGCCGTACAGGTGCGGCCAGTGCGGGAAGTCCTTCATCAAGAACTCCTCCCTCACTGTGCACCAGCGG  1554

Query 1375  ATCCACACGGGCGAGAAGCCCTACCGATGCGGCGAGTGCGGGAAGACCTTCAGCCGCAACACGAACCTGACGCG  1448
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  ATCCACACGGGCGAGAAGCCCTACCGATGCGGCGAGTGCGGGAAGACCTTCAGCCGCAACACGAACCTGACGCG  1628

Query 1449  CCACCTGCGGATTCACACC  1467
            |||||||||||||||||||
Sbjct 1629  CCACCTGCGGATTCACACC  1647

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