Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08805
- Subject:
- NM_001033167.3
- Aligned Length:
- 2067
- Identities:
- 1081
- Gaps:
- 852
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGATAGACCGGCGGCGTGAGGCGGCGGGTAGTGGTGCCGGGCGGCAGCCGGCCCCGGCGGAGGAGAACGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCCCTGCCGCCCGGGGACGCGGCGGCCTCGGCGCCCCTCGGAGGGCGCGCGGGCTCCGGCAGCAGCGCGGAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCCAGCCACTGCCTGCGCTGCACCCCAGCGGCGGCCCGCACTCGAGCTGCTGCGCGGCGACAGCCGCCCCGAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTCCTGTTGCTGGACTACGATGGCTCCGTGCTGCCCTTCCTCGGGGGCCTGGGCGGCGGCTACCAGAAGACCCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGTGGTGCTCACCTGGATCCCGGCACTGTTCATTGGCTTCAGCCAGTTCTCGGACTCCTTCCTTCTGGACCAGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCGATTTCTGGTGCCGCGGGGCCGGCAAAGGCACCGAGCTGGCGGGTGCCACTGTCACCGGCCGATGGGGTGAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATGGGCAATTGGACCAGCCCCTCGGCCACCCCCTTCTCCACTGCCTCCTGGGGGACCACGAGCAACCGAAGCAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAGCAGCGACACACCACCCCTCCCATCCCCTCCAGGCAAGGGGAACAACGACTCAAATTGCGACTGCCACGCGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGACTACGGCATCCGCACTGGTCTCATCCAAAACGTGGTCAGCAAGTGGGATCTTGTGTGTGATAATACCTGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAAGTCCATATCGCTAAGTTCTCCTTACTGGTTGGATTAATCTTTGGCTACCTAATAACTGGATGCATTGCTGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTGGGTTGGCCGGCGGCCTGTGCTGCTGTTTTCCACCATCTTCATCCTCATCTTTGGACTGACTGTGGCACTGT 814
Query 1 --------------ATGTTCAGCACACTCAGGTTCTTTGAAGGATTTTGCCTGGCTGGAATCATTCTCACCTTG 60
||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 815 CAGTGAATGTGACAATGTTCAGCACACTCAGGTTCTTTGAAGGATTTTGCCTGGCTGGAATCATCCTCACCTTG 888
Query 61 TATGCTTTACGAATAGAGCTGTGCCCCCCTGGAAAACGGTTCATGATTACGATGGTGGCGAGCTTCGTGGCCAT 134
|||||.||||||||||||||.|||||.||.||||||||||||||.|||||.|||||||||||||||||||||||
Sbjct 889 TATGCATTACGAATAGAGCTATGCCCTCCAGGAAAACGGTTCATAATTACCATGGTGGCGAGCTTCGTGGCCAT 962
Query 135 GGCGGGCCAGTTCCTCATGCCTGGGCTAGCCGCCCTGTGCCGGGATTGGCAGGTGCTGCAGGCCCTCATCATCT 208
|||||||||||||||||||||.|||||.||.||.|||||||||||.|||||||||.||||||||||||||||||
Sbjct 963 GGCGGGCCAGTTCCTCATGCCGGGGCTGGCTGCGCTGTGCCGGGACTGGCAGGTGTTGCAGGCCCTCATCATCT 1036
Query 209 GCCCCTTCCTGCTCATGCTGCTCTACTGGTCGATATTCCCCGAGTCCCTCCGGTGGCTAATGGCCACCCAGCAG 282
|.||||||||||||||||||||||||||||||||.|||||.|||||.|||||.|||||||||||.||||||||.
Sbjct 1037 GTCCCTTCCTGCTCATGCTGCTCTACTGGTCGATTTTCCCTGAGTCTCTCCGATGGCTAATGGCTACCCAGCAA 1110
Query 283 TTTGAGTCTGCAAAGAGGCTGATCCTCCACTTCACACAGAAGAATCGCATGAACCCTGAGGGCGACATCAAGGG 356
|||||.||.|||||||.|.|||||||..||.|.||.||||||||..|..|||.|||||||.|.||.||||||||
Sbjct 1111 TTTGAATCAGCAAAGAAGTTGATCCTGTACCTTACTCAGAAGAACTGTGTGAGCCCTGAGAGTGATATCAAGGG 1184
Query 357 TGTGATACCAGAGCTGGAGAAAGAGCTTTCCCGGAGGCCCAAGAAGGTCTGCATCGTGAAGGTGGTGGGGACAC 430
.|||||.||||||||.||||||||||||||.|||||||||||||||||.|||||||||||||||||||||||..
Sbjct 1185 AGTGATGCCAGAGCTCGAGAAAGAGCTTTCACGGAGGCCCAAGAAGGTGTGCATCGTGAAGGTGGTGGGGACGA 1258
Query 431 GGAACCTGTGGAAGAACATTGTGGTCCTGTGTGTGAACTCGCTGACGGGGTACGGGATCCACCACTGCTTTGCC 504
|||||||||||||.|||||||||||.||.|||||||||||||||||.||||||||||||||||||||||||||.
Sbjct 1259 GGAACCTGTGGAAAAACATTGTGGTTCTCTGTGTGAACTCGCTGACAGGGTACGGGATCCACCACTGCTTTGCA 1332
Query 505 AGGAGCATGATGGGCCACGAGGTGAAGGTGCCGCTCCTGGAGAACTTCTATGCTGACTACTATACCACGGCCAG 578
||.||||||||||||||.||.|||||||||||||||||||||||||||||.|||||||||||.||||.||||||
Sbjct 1333 AGAAGCATGATGGGCCATGAAGTGAAGGTGCCGCTCCTGGAGAACTTCTACGCTGACTACTACACCATGGCCAG 1406
Query 579 CATCGCGCTGGTGTCCTGCCTGGCCATGTGCGTGGTGGTCCGATTCCTCGGGCGCAGGGGAGGGCTGCTGCTCT 652
||||||.||||..||||||||.||||||||..||||.|||...|||||||||||||||||||||||||||||||
Sbjct 1407 CATCGCACTGGCCTCCTGCCTAGCCATGTGTCTGGTAGTCAAGTTCCTCGGGCGCAGGGGAGGGCTGCTGCTCT 1480
Query 653 TCATGATCCTCACCGCCCTGGCCTCGCTCCTGCAGCTCGGCCTCCTCAACCTGATTGGAAAGTACAGCCAGCAC 726
|||||||||||||.|||||||||||.||.||.||||||||.||.||||||.||||.||.||.|||||||||||.
Sbjct 1481 TCATGATCCTCACTGCCCTGGCCTCACTTCTACAGCTCGGGCTTCTCAACTTGATCGGCAAATACAGCCAGCAT 1554
Query 727 CCAGACTC------------------------AGGGATGAGTGACAGCGTCAAGGACAAATTTTCCATCGCGTT 776
|||||||| |||||||||||||||||||||||||||.||.|||||.|||||
Sbjct 1555 CCAGACTCAGAATTGCAGCTGAAGTTGGCCGTAGGGATGAGTGACAGCGTCAAGGACAAGTTCTCCATTGCGTT 1628
Query 777 TTCCATCGTGGGCATGTTTGCCTCCCATGCGGTGGGGAGCCTCAGCGTGTTCTTCTGTGCGGAGATCACCCCGA 850
||||||||||||.||||||||.|||||||||||||||||||||||.||.|||||||||||.||||||||.||.|
Sbjct 1629 TTCCATCGTGGGAATGTTTGCATCCCATGCGGTGGGGAGCCTCAGTGTCTTCTTCTGTGCAGAGATCACTCCCA 1702
Query 851 CGGTGATAAGGTGTGGCGGGCTGGGGCTGGTGCTGGCCAGCGCGGGCTTCGGCATGCTGACGGCACCCATCATC 924
|.||||||||||||||.|||||.|||||||||||||||||.||.||.||.|||||||||||.||.|||||.||.
Sbjct 1703 CAGTGATAAGGTGTGGTGGGCTCGGGCTGGTGCTGGCCAGTGCAGGTTTTGGCATGCTGACAGCGCCCATTATT 1776
Query 925 GAGCTGCACAACCAGAAAGGCTACTTCCTGCACCACATCATCTTTGCCTGCTGCACGCTCATCTGCATCATCTG 998
||||||||||||||.||||||||||||||||||||.||||||||.||||||||||||||||||||||||||.||
Sbjct 1777 GAGCTGCACAACCAAAAAGGCTACTTCCTGCACCATATCATCTTCGCCTGCTGCACGCTCATCTGCATCATTTG 1850
Query 999 CATCCTCCTGCTGCCCGAGAGCAGGGACCAGAACCTGCCTGAGAACATTTCTAACGGGGAGCACTACACGCGCC 1072
||||||||||||.||.|||||||||.|||||||||||||||||||.||..|.||||||||.||||||||.||.|
Sbjct 1851 CATCCTCCTGCTTCCTGAGAGCAGGAACCAGAACCTGCCTGAGAATATCGCCAACGGGGAACACTACACACGGC 1924
Query 1073 AGCCGCTGCTGCCGCACAAGAAGGGGGAGCAGCCACTGCTGCTCACCAACGCCGAGCTCAAGGACTACTCGGGC 1146
|.|||||||||||.|||||||||||.||||||||..||||||||||||||||.|||||||||||||||||||||
Sbjct 1925 AACCGCTGCTGCCACACAAGAAGGGAGAGCAGCCCTTGCTGCTCACCAACGCGGAGCTCAAGGACTACTCGGGC 1998
Query 1147 CTCCACGATGCCGCAGCCGCGGGTGACACACTGCCCGAGGGTGCCACGGCCAACGGCATGAAGGCCATG 1215
||.||.||.|..||.||.|.|||||||...|||||.|||||.|||||.|||||.|||||||||.|.|||
Sbjct 1999 CTGCATGACGTGGCTGCAGTGGGTGACGGGCTGCCAGAGGGGGCCACTGCCAATGGCATGAAGACTATG 2067
