Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08890
Subject:
NM_001351018.2
Aligned Length:
1797
Identities:
1731
Gaps:
51

Alignment

Query    1  AT------GGCGGCTCACCT-GTCCTACGGCCGAGTGAACCTAAACGTGTTGCGCGAGGCGGTGCGTCGCGAGC  67
            ||      ||.|||   ||| |.|.|||.|||   ||                  |||.|||.|.|      ||
Sbjct    1  ATGAAGGGGGGGGC---CCTGGGCGTACAGCC---TG------------------GAGCCGGAGTG------GC  44

Query   68  TGCGCGA--GTTCCTGGACAAGTGCGCAGGAAGCAAGGCAATAGTTTGGGATGAATACCTAACTGGACCCTTTG  139
            ..|||||  |||       ..|||.|     ||||..|||||||||||||||||||||||||||||||||||||
Sbjct   45  ACCGCGACTGTT-------TTGTGAG-----AGCAGAGCAATAGTTTGGGATGAATACCTAACTGGACCCTTTG  106

Query  140  GCCTGATTGCACAGTATTCACTATTGAAGGAACATGAAGTGGAAAAAATGTTCACACTTAAAGGAAATCGTTTG  213
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  107  GCCTGATTGCACAGTATTCACTATTGAAGGAACATGAAGTGGAAAAAATGTTCACACTTAAAGGAAATCGTTTG  180

Query  214  CCGGCAGCTGATGTGAAGAATATAATTTTTTTTGTCAGACCCAGGCTAGAGTTGATGGATATAATCGCTGAAAA  287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  181  CCGGCAGCTGATGTGAAGAATATAATTTTTTTTGTCAGACCCAGGCTAGAGTTGATGGATATAATCGCTGAAAA  254

Query  288  CGTGCTCAGTGAAGATAGACGAGGCCCAACGAGAGATTTTCATATTCTGTTTGTGCCACGCCGTAGCCTGTTGT  361
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  255  CGTGCTCAGTGAAGATAGACGAGGCCCAACGAGAGATTTTCATATTCTGTTTGTGCCACGCCGTAGCCTGTTGT  328

Query  362  GCGAACAGCGGTTGAAGGATCTGGGTGTCTTGGGATCCTTTATTCACAGGGAGGAGTACAGCTTAGATCTCATT  435
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  329  GCGAACAGCGGTTGAAGGATCTGGGTGTCTTGGGATCCTTTATTCACAGGGAGGAGTACAGCTTAGATCTCATT  402

Query  436  CCATTCGATGGGGATCTCTTATCCATGGAATCAGAGGGTGCATTCAAAGAGTGCTACCTGGAGGGTGACCAGAC  509
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  403  CCATTCGATGGGGATCTCTTATCCATGGAATCAGAGGGTGCATTCAAAGAGTGCTACCTGGAGGGTGACCAGAC  476

Query  510  GAGCCTGTACCACGCAGCCAAGGGGCTGATGACCCTGCAAGCTCTGTATGGAACGATCCCCCAGATCTTTGGGA  583
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  477  GAGCCTGTACCACGCAGCCAAGGGGCTGATGACCCTGCAAGCTCTGTATGGAACGATCCCCCAGATCTTTGGGA  550

Query  584  AAGGAGAATGCGCTCGGCAAGTGGCCAATATGATGATCAGGATGAAGAGAGAGTTTACAGGAAGCCAGAATTCA  657
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  551  AAGGAGAATGCGCTCGGCAAGTGGCCAATATGATGATCAGGATGAAGAGAGAGTTTACAGGAAGCCAGAATTCA  624

Query  658  ATATTTCCTGTTTTTGATAATCTCTTGTTGCTTGATCGGAATGTGGATTTATTAACACCTCTTGCCACTCAGCT  731
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  625  ATATTTCCTGTTTTTGATAATCTCTTGTTGCTTGATCGGAATGTGGATTTATTAACACCTCTTGCCACTCAGCT  698

Query  732  GACATATGAAGGACTCATTGATGAAATTTATGGCATTCAGAACAGTTATGTGAAATTACCTCCAGAGAAATTTG  805
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  699  GACATATGAAGGACTCATTGATGAAATTTATGGCATTCAGAACAGTTATGTGAAATTACCTCCAGAGAAATTTG  772

Query  806  CACCTAAGAAACAGGGCGATGGTGGTAAGGACCTCCCCACGGAAGCAAAGAAGCTGCAGCTGAATTCTGCAGAG  879
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  773  CACCTAAGAAACAGGGCGATGGTGGTAAGGACCTCCCCACGGAAGCAAAGAAGCTGCAGCTGAATTCTGCAGAG  846

Query  880  GAGCTCTATGCTGAGATCCGAGATAAGAACTTCAACGCAGTTGGCTCTGTGCTCAGCAAGAAAGCAAAGATCAT  953
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  847  GAGCTCTATGCTGAGATCCGAGATAAGAACTTCAACGCAGTTGGCTCTGTGCTCAGCAAGAAAGCAAAGATCAT  920

Query  954  CTCTGCAGCATTCGAGGAAAGACACAATGCTAAGACCGTGGGGGAGATCAAGCAGTTTGTTTCCCAGTTGCCCC  1027
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  921  CTCTGCAGCATTCGAGGAAAGACACAATGCTAAGACCGTGGGGGAGATCAAGCAGTTTGTTTCCCAGTTGCCCC  994

Query 1028  ACATGCAGGCAGCAAGGGGCTCGCTTGCAAACCATACCTCAATTGCAGAATTGATCAAAGATGTCACTACTTCT  1101
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  995  ACATGCAGGCAGCAAGGGGCTCGCTTGCAAACCATACCTCAATTGCAGAATTGATCAAAGATGTCACTACTTCT  1068

Query 1102  GAAGACTTTTTTGATAAATTAACCGTGGAACAGGAGTTTATGTCTGGAATAGACACTGATAAGGTCAACAATTA  1175
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1069  GAAGACTTTTTTGATAAATTAACCGTGGAACAGGAGTTTATGTCTGGAATAGACACTGATAAGGTCAACAATTA  1142

Query 1176  CATTGAGGATTGTATCGCCCAAAAGCACTCGTTGATCAAGGTGTTAAGACTAGTTTGCCTCCAATCCGTGTGTA  1249
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1143  CATTGAGGATTGTATCGCCCAAAAGCACTCGTTGATCAAGGTGTTAAGACTAGTTTGCCTCCAATCCGTGTGTA  1216

Query 1250  ATAGTGGGCTCAAACAAAAAGTTTTGGATTATTACAAAAGAGAGATTCTCCAGACATACGGCTATGAGCACATA  1323
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1217  ATAGTGGGCTCAAACAAAAAGTTTTGGATTATTACAAAAGAGAGATTCTCCAGACATACGGCTATGAGCACATA  1290

Query 1324  TTGACCTTACACAACCTGGAGAAGGCCGGCCTGCTGAAACCGCAGACGGGGGGCAGAAACAATTACCCAACTAT  1397
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1291  TTGACCTTACACAACCTGGAGAAGGCCGGCCTGCTGAAACCGCAGACGGGGGGCAGAAACAATTACCCAACTAT  1364

Query 1398  ACGGAAAACATTACGCCTCTGGATGGATGATGTTAATGAGCAAAACCCCACGGACATATCGTATGTGTACAGTG  1471
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1365  ACGGAAAACATTACGCCTCTGGATGGATGATGTTAATGAGCAAAACCCCACGGACATATCGTATGTGTACAGTG  1438

Query 1472  GGTATGCCCCGCTCAGTGTGCGGCTGGCCCAGCTGCTTTCCCGGCCTGGCTGGCGGAGCATCGAGGAGGTCCTC  1545
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1439  GGTATGCCCCGCTCAGTGTGCGGCTGGCCCAGCTGCTTTCCCGGCCTGGCTGGCGGAGCATCGAGGAGGTCCTC  1512

Query 1546  CGCATCCTCCCAGGGCCCCACTTTGAGGAGCGGCAGCCACTGCCCACAGGACTGCAGAAGAAACGTCAACCGGG  1619
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1513  CGCATCCTCCCAGGGCCCCACTTTGAGGAGCGGCAGCCACTGCCCACAGGACTGCAGAAGAAACGTCAACCGGG  1586

Query 1620  AGAAAACCGAGTGACTCTGATATTTTTCCTTGGGGGCGTAACCTTCGCTGAAATTGCTGCCCTGCGATTTCTCT  1693
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1587  AGAAAACCGAGTGACTCTGATATTTTTCCTTGGGGGCGTAACCTTCGCTGAAATTGCTGCCCTGCGATTTCTCT  1660

Query 1694  CCCAGTTGGAAGATGGAGGTACAGAATATGTCATTGCCACCACTAAACTAATGAATGGAACCAGTTGGATAGAG  1767
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1661  CCCAGTTGGAAGATGGAGGTACAGAATATGTCATTGCCACCACTAAACTAATGAATGGAACCAGTTGGATAGAG  1734

Query 1768  GCTCTGATGGAAAACCCTTTC  1788
            ||||||||||||||.||||||
Sbjct 1735  GCTCTGATGGAAAAACCTTTC  1755

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