Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08894
Subject:
NM_001350158.2
Aligned Length:
2130
Identities:
2105
Gaps:
24

Alignment

Query    1  ATGGAAGATCCATTTG------------------------AGGAAGCAGACCAGCCCACTACAGAGCCAGGCAT  50
            ||||||||||||||||                        ||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGAAGATCCATTTGACTTCTCCAGAGAACCTTGGAACAAGGAAGCAGACCAGCCCACTACAGAGCCAGGCAT  74

Query   51  GGTCCTGGACAGTGTGGAAGCAGGAGACACAACACCTCCTACCAAAAGGAAGAGCAAGTTCTCAGGCTTTGGCA  124
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGTCCTGGACAGTGTGGAAGCAGGAGACACAACACCTCCTACCAAAAGGAAGAGCAAGTTCTCAGGCTTTGGCA  148

Query  125  AGATCTTCAAGCCCTGGAAATGGAGGAAAAAAAAAAGTAGTGATAAATTTAAAGAGACTTCAGAAGTTTTAGAA  198
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGATCTTCAAGCCCTGGAAATGGAGGAAAAAAAAAAGTAGTGATAAATTTAAAGAGACTTCAGAAGTTTTAGAA  222

Query  199  CGGAAAATATCTATGCGAAAGCCAAGAGAAGAGCTGGTTAAAAGAGGGGTTCTGTTGGAAGACCCTGAGCAAGG  272
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CGGAAAATATCTATGCGAAAGCCAAGAGAAGAGCTGGTTAAAAGAGGGGTTCTGTTGGAAGACCCTGAGCAAGG  296

Query  273  TGGTGAGGATCCAGGAAAGCCAAGCGATGCCATGTTAAAGAATGGCCATACCACCCCCATAGGGAATGCCAGAT  346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TGGTGAGGATCCAGGAAAGCCAAGCGATGCCATGTTAAAGAATGGCCATACCACCCCCATAGGGAATGCCAGAT  370

Query  347  CATCTAGTCCAGTCCAAGTAGAGGAAGAGCCAGTAAGATTAGCAAGTCTTAGGAAAGCTATTCCAGAAGAGGAC  420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CATCTAGTCCAGTCCAAGTAGAGGAAGAGCCAGTAAGATTAGCAAGTCTTAGGAAAGCTATTCCAGAAGAGGAC  444

Query  421  CTAAAGAAACGACTAGGCTCAACTGGAAGCCAGCCTAATTCTGAAGCAGAGTCTGTTCCTGAGAATGTACCCAA  494
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CTAAAGAAACGACTAGGCTCAACTGGAAGCCAGCCTAATTCTGAAGCAGAGTCTGTTCCTGAGAATGTACCCAA  518

Query  495  ACCACCTTTACTTCCTCCCAAAAGACCCTTGTCCTCTTCTCATGAAGCAAGTGAAGGGCAAGCAAAGGATGCCA  568
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  ACCACCTTTACTTCCTCCCAAAAGACCCTTGTCCTCTTCTCATGAAGCAAGTGAAGGGCAAGCAAAGGATGCCA  592

Query  569  CTTCCTCTGGCGGCACGGCAAGGTTCATCATCTCCACCTCCATCACCACAGCACCCGCTGCCACCACTGCTGCC  642
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CTTCCTCTGGCGGCACGGCAAGGTTCATCATCTCCACCTCCATCACCACAGCACCCGCTGCCACCACTGCTGCC  666

Query  643  ACAAGCCTTGCAAAGACTGTTAATCTCTCTGTCACCCCTTCCCCAGCACCCAGGACTCTGCCTGCTGCTCCTGC  716
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ACAAGCCTTGCAAAGACTGTTAATCTCTCTGTCACCCCTTCCCCAGCACCCAGGACTCTGCCTGCTGCTCCTGC  740

Query  717  CAGCACTAACACTACTGCTACCCCAAGCCTCACTCATATGGTCCCTGCCAAGCAGCCCCCTATCCCTCCCCCTA  790
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CAGCACTAACACTACTGCTACCCCAAGCCTCACTCATATGGTCCCTGCCAAGCAGCCCCCTATCCCTCCCCCTA  814

Query  791  AACCAGCTCACAGAAATAGCAACCCTGTCATTGCTGAACTGTCCCAAGCAATAAACAGTGGTACATTGTTATCA  864
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AACCAGCTCACAGAAATAGCAACCCTGTCATTGCTGAACTGTCCCAAGCAATAAACAGTGGTACATTGTTATCA  888

Query  865  AAACCGTCCCCACCCTTACCACCTAAGAGAGGCATTCCATCAACCTCAGTACCCACCTTGGAGTCTGCTGCTGC  938
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AAACCGTCCCCACCCTTACCACCTAAGAGAGGCATTCCATCAACCTCAGTACCCACCTTGGAGTCTGCTGCTGC  962

Query  939  CATCACCACAAAAACACCAAGTGATGAAAGAGAGAAGAGCACGTGTTCTATGGGCTCGGAACTACTACCAATGA  1012
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CATCACCACAAAAACACCAAGTGATGAAAGAGAGAAGAGCACGTGTTCTATGGGCTCGGAACTACTACCAATGA  1036

Query 1013  TCTCACCTCGCTCTCCGTCCCCCCCACTGCCTACTCATATACCTCCAGAGCCTCCACGCACCCCTCCATTCCCT  1086
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TCTCACCTCGCTCTCCGTCCCCCCCACTGCCTACTCATATACCTCCAGAGCCTCCACGCACCCCTCCATTCCCT  1110

Query 1087  GCTAAGACTTTTCAAGTTGTGCCAGAAATTGAGTTTCCACCATCCTTAGATCTACACCAGGAGATTCCCCAGCA  1160
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GCTAAGACTTTTCAAGTTGTGCCAGAAATTGAGTTTCCACCATCCTTAGATCTACACCAGGAGATTCCCCAGCA  1184

Query 1161  GGAAGATCAGAAAAAGGAAGTCCCCAAGAGGATACTGGACCAGAACTTTGGGGAGCCCCATATACCCTCTAGGC  1234
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GGAAGATCAGAAAAAGGAAGTCCCCAAGAGGATACTGGACCAGAACTTTGGGGAGCCCCATATACCCTCTAGGC  1258

Query 1235  TGCCTCCACTCCCACTGCATATTCGAATCCAGCAGGCCCTCACCAGCCCACTTCCCATGACTCCTATTCTGGAG  1308
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TGCCTCCACTCCCACTGCATATTCGAATCCAGCAGGCCCTCACCAGCCCACTTCCCATGACTCCTATTCTGGAG  1332

Query 1309  GGTTCTCACAGAGCTCATTCGTTGCTTTTTGAAAACAGTGACAGCTTTTCTGAGGACAGCAGTACGCTGGGTCG  1382
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GGTTCTCACAGAGCTCATTCGTTGCTTTTTGAAAACAGTGACAGCTTTTCTGAGGACAGCAGTACGCTGGGTCG  1406

Query 1383  GACCAGGTCTCTTCCCATCACTATTGAAATGCTAAAAGTTCCAGACGATGAAGAAGAAGAGGAGCAAACCTGTC  1456
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GACCAGGTCTCTTCCCATCACTATTGAAATGCTAAAAGTTCCAGACGATGAAGAAGAAGAGGAGCAAACCTGTC  1480

Query 1457  CATCCACATTCAGTGAAGAAATGACACCTACCTCAGTCATTCCTAAATTACCACAGTGTCTACGGGAGGAAGAA  1530
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CATCCACATTCAGTGAAGAAATGACACCTACCTCAGTCATTCCTAAATTACCACAGTGTCTACGGGAGGAAGAA  1554

Query 1531  GAGAAGGAGAGCGACTCTGATTCAGAAGGTCCCATTCAGTACCGAGATGAAGAAGATGAAGATGAAAGCTATCA  1604
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  GAGAAGGAGAGCGACTCTGATTCAGAAGGTCCCATTCAGTACCGAGATGAAGAAGATGAAGATGAAAGCTATCA  1628

Query 1605  GAGTGCTCTTGCCAACAAAGTGAAGAGGAAAGACACACTGGCAATGAAGTTGAACCACAGACCCAGTGAACCAG  1678
            |||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  GAGTGCTCTCGCCAACAAAGTGAAGAGGAAAGACACACTGGCAATGAAGTTGAACCACAGACCCAGTGAACCAG  1702

Query 1679  AGTTGAACCTGAATTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAGATTGGAAACACA  1752
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  AGTTGAACCTGAATTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAGATTGGAAACACA  1776

Query 1753  CTGATCCGGCGACTGAGTCAAAGACCAACACCAGAAGAACTAGAACAACGCAATATATTGCAACCTAAAAATGA  1826
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  CTGATCCGGCGACTGAGTCAAAGACCAACACCAGAAGAACTAGAACAACGCAATATATTGCAACCTAAAAATGA  1850

Query 1827  AGCTGATCGTCAGGCAGAAAAACGAGAAATTAAACGTCGGCTCACTAGAAAGCTCAGTCAAAGGCCAACTGTCG  1900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  AGCTGATCGTCAGGCAGAAAAACGAGAAATTAAACGTCGGCTCACTAGAAAGCTCAGTCAAAGGCCAACTGTCG  1924

Query 1901  CTGAACTCCTTGCCAGGAAGATTCTGAGGTTTAATGAATATGTAGAGGTAACAGATGCTCAAGATTATGACCGG  1974
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  CTGAACTCCTTGCCAGGAAGATTCTGAGGTTTAATGAATATGTAGAGGTAACAGATGCTCAAGATTATGACCGG  1998

Query 1975  CGAGCCGACAAACCTTGGACCAAACTGACCCCTGCTGACAAGGCTGCCATAAGAAAAGAATTAAATGAATTTAA  2048
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  CGAGCCGACAAACCTTGGACCAAACTGACCCCTGCTGACAAGGCTGCCATAAGAAAAGAATTAAATGAATTTAA  2072

Query 2049  AAGCTCCGAGATGGAGGTTCATGAAGAGAGCAAACATTTTACACGCTACCATCGTCCA  2106
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  AAGCTCCGAGATGGAGGTTCATGAAGAGAGCAAACATTTTACACGCTACCATCGTCCA  2130

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