Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08942
Subject:
NM_001349794.1
Aligned Length:
1263
Identities:
755
Gaps:
507

Alignment

Query    1  ATGTACGCCTTTGTGCGGTTCCTGGAGGACAACGTCTGCTACGCGCTGCCCGTGTCGTGCGTGCGCGACTTCAG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCCCCGCTCGCGGCTGGATTTTGACAACCAGAAGGTGTACGCCGTGTACCGGGGCCCGGAGGAATTGGGCGCCG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  GGCCCGAGAGCCCCCCGCGCGCCCCCCGCGACTGGGGCGCGCTGTTGCTCCACAAGGCCCAGATCCTGGCGCTG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GCAGAAGACAAATCTGACCTTGAAAACAGTGTGATGCAGAAGAAAATAAAAATCCCCAAGCTTTCTCTTAATCA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  TGTAGAAGAAGATGGAGAGGTTAAAGATTATGGGGAAGAAGATTTACAGCTTAGACACATCAAGAGACCTGAGG  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  GGCGGAAGCCGAGCGAAGTGGCGCACAAGAGCATCGAGGCAGTGGTGGCTCGGCTAGAGAAGCAGAACGGCCTG  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  AGCCTGGGCCATAGCACGTGTCCGGAAGAGGTCTTCGTGGAGGCCTCGCCAGGCACAGAGGACATGGACAGTCT  518
                                                                           |||||||||||
Sbjct    1  ---------------------------------------------------------------ATGGACAGTCT  11

Query  519  AGAAGATGCTGTGGTGCCCCGGGCTCTGTATGAGGAGCTGCTGCGCAACTACCAGCAGCAACAGGAAGAGATGC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   12  AGAAGATGCTGTGGTGCCCCGGGCTCTGTATGAGGAGCTGCTGCGCAACTACCAGCAGCAACAGGAAGAGATGC  85

Query  593  GCCACCTCCAGCAGGAGCTGGAGCGGACTCGGAGGCAGCTGGTACAACAGGCCAAGAAGCTCAAGGAGTACGGG  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   86  GCCACCTCCAGCAGGAGCTGGAGCGGACTCGGAGGCAGCTGGTACAACAGGCCAAGAAGCTCAAGGAGTACGGG  159

Query  667  GCACTTGTGTCTGAAATGAAGGAGCTCCGTGACCTTAACCGGAGGCTCCAGGACGTGCTGCTCCTGAGGCTTGG  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct  160  GCACTTGTGTCTGAAATGAAGGAGCTCCGTGACCTTAACCGGAGGCTCCAGGACGTGCTGCTCCTGCGGCTTGG  233

Query  741  CAGCGGTCCCGCCATTGATCTGGAAAAAGTAAAGTCAGAATGTCTCGAGCCCGAGCCGGAGTTACGGAGCACTT  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  234  CAGCGGTCCCGCCATTGATCTGGAAAAAGTAAAGTCAGAATGTCTCGAGCCCGAGCCGGAGTTACGGAGCACTT  307

Query  815  TCAGTGAGGAAGCAAATACGTCGTCCTATTACCCCGCTCCTGCGCCTGTCATGGACAAGTATATCCTAGACAAT  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  308  TCAGTGAGGAAGCAAATACGTCGTCCTATTACCCCGCTCCTGCGCCTGTCATGGACAAGTATATCCTAGACAAT  381

Query  889  GGCAAGGTCCATCTGGGAAGCGGGATTTGGGTTGATGAGGAGAAATGGCACCAGCTACAAGTAACCCAAGGAGA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  382  GGCAAGGTCCATCTGGGAAGCGGGATTTGGGTTGATGAGGAGAAATGGCACCAGCTACAAGTAACCCAAGGAGA  455

Query  963  TTCCAAGTACACGAAGAACTTGGCAGTTATGATTTGGGGAACAGATGTTCTGAAAAACAGAAGCGTCACAGGCG  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  456  TTCCAAGTACACGAAGAACTTGGCAGTTATGATTTGGGGAACAGATGTTCTGAAAAACAGAAGCGTCACAGGCG  529

Query 1037  TCGCCACAAAAAAAAAGAAAGATGCAGTCCCTAAACCACCCCTCTCGCCTCACAAACTAAGCATCGTCAGAGAG  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  530  TCGCCACAAAAAAAAAGAAAGATGCAGTCCCTAAACCACCCCTCTCGCCTCACAAACTAAGCATCGTCAGAGAG  603

Query 1111  TGTTTGTATGACAGAATAGCACAAGAAACTGTGGATGAAACTGAAATTGCACAGAGACTCTCCAAAGTCAACAA  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  604  TGTTTGTATGACAGAATAGCACAAGAAACTGTGGATGAAACTGAAATTGCACAGAGACTCTCCAAAGTCAACAA  677

Query 1185  GTACATCTGTGAAAAAATCATGGATATCAATAAATCCTGTAAAAATGAAGAACGAAGGGAAGCAAAATACAATT  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  678  GTACATCTGTGAAAAAATCATGGATATCAATAAATCCTGTAAAAATGAAGAACGAAGGGAAGCAAAATACAATT  751

Query 1259  TGCAA  1263
            |||||
Sbjct  752  TGCAA  756