Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08942
- Subject:
- NR_146232.1
- Aligned Length:
- 1849
- Identities:
- 1113
- Gaps:
- 735
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGGGAGCCTGGGTCCTGGGGAGCCGCCCCCGCCCCCCCCAGCACCGTAGCGAGACTCGCGCCCCCCGCCGGAT 74
Query 1 ----------------------------------------------------------------ATGTACGCCT 10
||||||||||
Sbjct 75 CCCCACCTCCGCGCCCGCCCCGCGGGCTGAGCTGCCCGACCGGGGCCCGCCCCCGGCGCCCACCATGTACGCCT 148
Query 11 TTGTGCGGTTCCTGGAGGACAACGTCTGCTACGCGCTGCCCGTGTCGTGCGTGCGCGACTTCAGCCCCCGCTCG 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TTGTGCGGTTCCTGGAGGACAACGTCTGCTACGCGCTGCCCGTGTCGTGCGTGCGCGACTTCAGCCCCCGCTCG 222
Query 85 CGGCTGGATTTTGACAACCAGAAGGTGTACGCCGTGTACCGGGGCCCGGAGGAATTGGGCGCCGGGCCCGAGAG 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CGGCTGGATTTTGACAACCAGAAGGTGTACGCCGTGTACCGGGGCCCGGAGGAATTGGGCGCCGGGCCCGAGAG 296
Query 159 CCCCCCGCGCGCCCCCCGCGACTGGGGCGCGCTGTTGCTCCACAAGGCCCAGATCCTGGCGCTGGCAGAAGACA 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCCCCCGCGCGCCCCCCGCGACTGGGGCGCGCTGTTGCTCCACAAGGCCCAGATCCTGGCGCTGGCAGAAGACA 370
Query 233 AATCTGACCTTGAAAACAGTGTGATGCAGAAGAAAATAAAAATCCCCAAGCTTTCTCTTAATCATGTAGAAGAA 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AATCTGACCTTGAAAACAGTGTGATGCAGAAGAAAATAAAAATCCCCAAGCTTTCTCTTAATCATGTAGAAGAA 444
Query 307 GATGGAGAGGTTAAAGATTATGGGGAAGAAGATTTACAGCTTAGACACATCA---------------------- 358
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GATGGAGAGGTTAAAGATTATGGGGAAGAAGATTTACAGCTTAGACACATCAAGGATTGTCTGGGGAAATATTG 518
Query 359 ------------------------------------------------------------AGAGACCTGAGGGG 372
||||||||||||||
Sbjct 519 ATCTGCAGTCCAAGAAAATCCCAGCTGCCCTTGCCTGAACTGATTCTCGTTGTCCTACACAGAGACCTGAGGGG 592
Query 373 CGGAAGCCGAGCGAAGTGGCGCACAAGAGCATCGAGGCAGTGGTGGCTCGGCTAGAGAAGCAGAACGGCCTGAG 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CGGAAGCCGAGCGAAGTGGCGCACAAGAGCATCGAGGCAGTGGTGGCTCGGCTAGAGAAGCAGAACGGCCTGAG 666
Query 447 CCTGGGCCATAGCACGTGTCCGGAAGAGGTCTTCGTGGAGGCCTCGCCAGGCACAGAGGACATGGACAGTCTAG 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CCTGGGCCATAGCACGTGTCCGGAAGAGGTCTTCGTGGAGGCCTCGCCAGGCACAGAGGACATGGACAGTCTAG 740
Query 521 AAGATGCTGTGGTGCCCCGGGCTCTGTATGAGGAGCTGCTGCGCAACTACCAGCAGCAACAGGAAGAGATGCGC 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AAGATGCTGTGGTGCCCCGGGCTCTGTATGAGGAGCTGCTGCGCAACTACCAGCAGCAACAGGAAGAGATGCGC 814
Query 595 CACCTCCAGCAGGAGCTGGAGCGGACTCGGAGGCAGCTGGTACAACAGGCCAAGAAGCTCAAGGAGTACGGGGC 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CACCTCCAGCAGGAGCTGGAGCGGACTCGGAGGCAGCTGGTACAACAGGCCAAGAAGCTCAAGGAGTACGGGGC 888
Query 669 ACTTGTGTCTGAAATGAAGGAGCTCCGTGACCTTAACCGGAGGCTCCAGGACGTGCTGCTCCTGAGGCTTGGCA 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 889 ACTTGTGTCTGAAATGAAGGAGCTCCGTGACCTTAACCGGAGGCTCCAGGACGTGCTGCTCCTGCGGCTTGGCA 962
Query 743 GCGGTCCCGCCATTGATCTGGAAAAAGTAAAGTCAGAATGTCTCGAGCCCGAGCCGGAGTTACGGAGCACTTTC 816
||
Sbjct 963 GC------------------------------------------------------------------------ 964
Query 817 AGTGAGGAAGCAAATACGTCGTCCTATTACCCCGCTCCTGCGCCTGTCATGGACAAGTATATCCTAGACAATGG 890
Sbjct 965 -------------------------------------------------------------------------- 964
Query 891 CAAGGTCCATCTGGGAAGCGGGATTTGGGTTGATGAGGAGAAATGGCACCAGCTACAAGTAACCCAAGGAGATT 964
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 965 ---GGTCCATCTGGGAAGCGGGATTTGGGTTGATGAGGAGAAATGGCACCAGCTACAAGTAACCCAAGGAGATT 1035
Query 965 CCAAGTACACGAAGAACTTGGCAGTTATGATTTGGGGAACAGATGTTCTGAAAAACAGAAGCGTCACAGGCGTC 1038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036 CCAAGTACACGAAGAACTTGGCAGTTATGATTTGGGGAACAGATGTTCTGAAAAACAGAAGCGTCACAGGCGTC 1109
Query 1039 GCCACAAAAAAAAAGAAAGATGCAGTCCCTAAACCACCCCTCTCGCCTCACAAACTAAGCATCGTCAGAGAGTG 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110 GCCACAAAAAAAAAGAAAGATGCAGTCCCTAAACCACCCCTCTCGCCTCACAAACTAAGCATCGTCAGAGAGTG 1183
Query 1113 TTTGTATGACAGAATAGCACAAGAAACTGTGGATGAAACTGAAATTGCACAGAGACTCTCCAAAGTCAACAAGT 1186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184 TTTGTATGACAGAATAGCACAAGAAACTGTGGATGAAACTGAAATTGCACAGAGACTCTCCAAAGTCAACAAGT 1257
Query 1187 ACATCTGTGAAAAAATCATGGATATCAATAAATCCTGTAAAAATGAAGAACGAAGGGAAGCAAAATACAATTTG 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 ACATCTGTGAAAAAATCATGGATATCAATAAATCCTGTAAAAATGAAGAACGAAGGGAAGCAAAATACAATTTG 1331
Query 1261 CAA----------------------------------------------------------------------- 1263
|||
Sbjct 1332 CAATAAACTTTGGATTTTTCATAAAGCTTTCGTGTTTTCCTTGTGTGGCATGTGATTTGCGAGCGATGGTGCCG 1405
Query 1264 -------------------------------------------------------------------------- 1263
Sbjct 1406 TCCAAATCAGACCCCACCGTGCATGGTGGTGTGTGTGCAGGGATCCATCGGGTTCTGGGGTCAGCGGCTTGTTC 1479
Query 1264 -------------------------------------------------------------------------- 1263
Sbjct 1480 TGAATGTGGACACTCCAAAGACGACAGATGGCTTTGCTGAGACTCAGGAGCAGCCTGGCACTGGTGTCCTTCTG 1553
Query 1264 -------------------------------------------------------------------------- 1263
Sbjct 1554 GGAATGGGGAAAACACTCTTCTTGGAGGGGGATAAGGTTGCCTGAGTTGCCTGTCACTTGACTGGGGTTTGAAT 1627
Query 1264 ------------------------------------------------------------------------- 1263
Sbjct 1628 GGATATTTTTACTATCCAAGGACTTCTTTGTTGCTCTATTTTGTTCTATAATAAATTTTCATTAATTCTTTGA 1700
