Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08948
- Subject:
- NR_033265.2
- Aligned Length:
- 4462
- Identities:
- 984
- Gaps:
- 3477
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTCGCGTCCCTGCGCCGTGCCTGCCTCGCGCTCCCTGTTACGGCGTTCGTCCCCGGGCCTGGCGCCCGCGTCC 74
Query 1 ---------------------------ATGGCTCCTCAGCGGAGGGCCGCAACCAAGGCGCCCGAGGGCAACGG 47
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGCCCGGCTCCGCGGCGGCCTGGTCCGATGGCTCCTCAGCGGAGGGCCGCAACCAAGGCGCCCGAGGGCAACGG 148
Query 48 AGCGGCCGAGCGCCGGAACCGGAGCAGCACCAAGAAGGACCGAGCCCCGCGGGAGGTGCAGAGGCTGTGGCAGA 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGCGGCCGAGCGCCGGAACCGGAGCAGCACCAAGAAGGACCGAGCCCCGCGGGAGGTGCAGAGGCTGTGGCAGA 222
Query 122 GGCCGTGGCTAAGGACCGCGGGCCTGGGGGCTGGCTTTGTGCTCACCGCACTCCTGCTCTGGAGCAGCTTGGGG 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGCCGTGGCTAAGGACCGCGGGCCTGGGGGCTGGCTTTGTGCTCACCGCACTCCTGCTCTGGAGCAGCTTGGGG 296
Query 196 GCCGACGACGGGGTCGCAGAGGTCCTGGCCCGCCGTGGCGAGGTCGTGGCAGGGAGATTCATCGAGGTGCCCTG 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GCCGACGACGGGGTCGCAGAGGTCCTGGCCCGCCGTGGCGAGGTCGTGGCAGGGAGATTCATCGAGGTGCCCTG 370
Query 270 CTCTGAGGACTACGACAGTCACCGCAGGTTCGAAGGCTGCACTCCCCGAAAGTGCGGCAGAGGTGTCACCGATG 343
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CTCTGAGGACTACGACAGTCACCGC--------AGGCTGCACTCCCCGAAAGTGCGGCAGAGGTGTCACCGATG 436
Query 344 TCGTCATCACCAGGGAGGAAGCGGAGCGGATTCGCAGCGTAGCTGAAAAGGGGCTCTCCCTGGGAGGATCTGAC 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 437 TCGTCATCACCAGGGAGGAAGCGGAGCGGATTCGCAGCGTAGCTGAAAAGGGGCTCTCCCTGGGAGGATCTGAC 510
Query 418 GGAGGGGCATCCATTCTGGACTTGCACTCAGGGGCCCTGTCTGTCGGGAAGCACTTTGTGAACCTGTACAGATA 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 511 GGAGGGGCATCCATTCTGGACTTGCACTCAGGGGCCCTGTCTGTCGGGAAGCACTTTGTGAACCTGTACAGATA 584
Query 492 CTTCGGGGATAAAATACAGAACATCTTCTCAGAGGAGGACTTCCGGTTATACCGGGAGGTGCGGCAGAAGGTCC 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 585 CTTCGGGGATAAAATACAGAACATCTTCTCAGAGGAGGACTTCCGGTTATACCGGGAGGTGCGGCAGAAGGTCC 658
Query 566 AGCTCACCATTGCTGAGGCTTTTGGCATCAGCGCATCCTCGCTGCATCTGACCAAGCCCACCTTCTTCTCCCGC 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 659 AGCTCACCATTGCTGAGGCTTTTGGCATCAGCGCATCCTCGCTGCATCTGACCAAGCCCACCTTCTTCTCCCGC 732
Query 640 ATAAACAGCACGGAAGCGCGGACGGCGCACGACGAGTACTGGCATGCGCACGTGGACAAGGTGACCTACGGCTC 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 733 ATAAACAGCACGGAAGCGCGGACGGCGCACGACGAGTACTGGCATGCGCACGTGGACAAGGTGACCTACGGCTC 806
Query 714 CTTCGACTACACCTCGCTGCTGTACCTCTCCAACTACCTGGAGGACTTCGGCGGAGGGCGGTTCATGTTCATGG 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 807 CTTCGACTACACCTCGCTGCTGTACCTCTCCAACTACCTGGAGGACTTCGGCGGAGGGCGGTTCATGTTCATGG 880
Query 788 AGGAGGGTGCCAACAAGACGGTGGAGCGGAGAGCTGGATGTTTTTGTTTCCGGATGATGTCTTGTGGGTTCCAA 861
|||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 881 AGGAGGGTGCCAACAAGACGGTGGAGCCGAGAGCTGGATGTTTTTGTTTCCGGATGATGTCTTGTGGGTTCCAA 954
Query 862 GAAGTTAATGGACCGAGAGCCAGTGAAGCTGCTGGTGCGAAGGCTGGAGTCAGGTGTCCTCCGGGGACTCACCA 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 955 GAAGTTAATGGACCGAGAGCCAGTGAAGCTGCTGGTGCGAAGGCTGGAGTCAGGTGTCCTCCGGGGACTCACCA 1028
Query 936 CCCGCCCGAGAGGGGAGAGACACATGCGATTCTGGAAGCTGAGAGCATTGCTTATTGT---------------- 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1029 CCCGCCCGAGAGGGGAGAGACACATGCGATTCTGGAAGCTGAGAGCATTGCTTATTGTTGATTCCTTGGTTGCC 1102
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1103 GTGCTGAGTCCTGCTTTAAGGAAGCAGGTCGCGTCTCCTTCTTCACCTCGGGGTCCGAGAACCTACACCGCGTG 1176
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1177 GAGAAGGTCCACTGGGGCACCCGTTACGCCATCACCATCGCCTTCAGCTGCAACCCCGACCATGGCATCGAGGA 1250
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1251 CCCAGCGTTCCCGTAGCCAGCAGCCGGGCCAAGGTAACTTCAGGAGGGCCCGTGTGGAGGCAGCCGCGCCAGTC 1324
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1325 GTGCACCCACCCCCACGTCCACCCGCTCCTGTTGCACAGAGTGCCTTAGGAATTCTCTGATTTTGATTTGCTGA 1398
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1399 CGTGTTAATCTTTTCATCTGTGAGTAAATGAAGGGAACCAGCTTTTCACTTCTCCAGCATCATGTGTGCTTGGG 1472
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1473 CTGTAGGCCTGGGAGCCTGAGGTGGAGGCCAGGAAAGGGACCCAGCAGGACGGGGCACAAGTCCCCATCTGTGA 1546
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1547 ATGGACGGGACTCATCCACCCAGGTTCAGCAACCCCCCGGGACTCGTCCAGGTTCAGCAACCCCCCGGCCCATC 1620
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1621 AAAGACTGGCTAAAGCATCAGCCATAAATGGGGACAAACGTGGGGCCAGCAGCTTCTGTTCGGGGTCTCGGCAT 1694
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1695 CAGCAAACCGCAGCAGCTTTGGAGAAGGGTCCGTGAGTGGCGGCTCTGGAGGCAGCAACGGGGTCCTTTGGGGT 1768
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1769 GGGTGGGAGTTCTGCTGGATTCAGGTGGAGGTGAACATCTGCCGTTCCCACAGCCCTGCGTGCACCCCCAATGC 1842
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1843 TGCTGGCCCACAAATCACCGTGGGCCACGGCCCCACCACACCAGGCTTGGCCCTGTCAGCGGCCAGCATCCCAA 1916
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1917 GGGCCAGGGTCCGAGTGTCCTCACCAAGGAGGCTCTTGGCGTCGCTGTGCCGGCTCCCATGGGCCTTCTGCTGG 1990
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1991 GTCGAGGGTAGGTCTCCTCCTCCCCCTTTGCCCTGGCATTAAACTGATGGTCAGGCTGGGCGCGGTGGCTCACA 2064
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2065 CCTGTAATCTCAGCACTGCGGGAGGCCGAGGCAGGAGGATCACTTGAGGTCAGGAGTTCAAGACCAGCCTGGCC 2138
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2139 AACATGGCGAAACCCTGTCTCTACTAAAAACACAAAAACAAATTAATCCCAGCTACTGGGGAGGCTGAGGCAGG 2212
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2213 AGAATCGCTTGAACCCAGGGGGCAGAAGTTGCAGTGAGCCGAGATCGTGCCACTACACTCCAGCCTGGGTGACA 2286
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2287 GAGTGAGACTCCATCTTAAAAATATAAAAATAAAGTGGTGGTCAGAGGAGCCCCGAATAGACCAGTTGTGGAGA 2360
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2361 GGCCTGGGTGGGGTGGCTGGCAGGGAGGGCAGGCCAAGCCCAGTTTCTGCCCACAGTCACCTCGAGGTGACTGT 2434
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2435 CCAGGGCTTTGGGCACCTTCCCGGGAGGGGGACGGCCGCCCACCCTGAGTGGTGTTGGAAGCTGGGCTCTCCTG 2508
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2509 GATGCCCTGACCCAGCTGCCTGGGGAGAGCCCTGGGCCCCTCCTCCCTCAGCACCTCCTCCCTCAGCCCCTCCT 2582
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2583 GCCTCGGTCCCTCCTCCCTTAGCCTGTCTGGCATAGATCCATGTTCCCTAGCCCCTGGCACAGGTGCCTCTGAC 2656
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2657 TGGAGGAGGCCCCACCTGTGGCCCGGGAGCTGCTCTGGGGGTTGATAAAGGGCAGCATTATTGGGTCCTGGGAA 2730
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2731 GGAGCGGGCGTGAGGCCAGCTGAGGCATGGTGACCCCTGGGAAGGAGCGGGCGTGAGGCCAGCTGAGGCATGGT 2804
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2805 GACCCCTGGGAAGGAGCGGGCGTGAGGCCAGCTGAGGCATGGTGACCCCTGGGAAGGAGCGGGCGTGAGGCCAG 2878
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2879 CTGAGGCATGGTGACCCCTGGGAAGGAGCGGGCGTGAGGCCAGCTGAGGCATGGTGACCCCTGGGTACGGGGGA 2952
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2953 CTTGGGGGCCGCACCTTGGTTTGCCCAGGGCCCCTCCTGCACCACGGGCCACATGCGGAGGACGGCGTGGGATA 3026
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3027 GGCTCCCTGGGTCCACAGCTTCTGCCCGTGTATGGGGAACCCTCCTTGGTCAGGGCTGCAGGCTCTGGGCAGAT 3100
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3101 GGGGCAGGAACCCTGAGGCTCCCGCGCCCTCCCATGGCCTCTGATGTGGGACACTGGAGCGAGGCACGATTCTG 3174
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3175 AAGGACTCCATGGATCTGGGAGGATGAGGCCCACCTCCGGTTGGTGGCCAAAGCCGTCCTTGCGGGGCCGGCTG 3248
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3249 CTTCACGGACACTCTCCGGGTCGGGCTGGTGGGCCCCATCGTGGGTGGGAAGTCGCCTGAGCCTGGGCCGCCCT 3322
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3323 TGAGCTTCTCCCAGTCTTGACTTTCCAGAGGGTCCGTGGCTGTGGTCATGGTCGGGGCAGGTGGAAAATGCTGC 3396
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3397 ATGGAAACCTGATCCTGTCACCTTGGAGTAAATGATGATGTCGCCGGCTTCTCGCCACGTCTAAAGGATAAATG 3470
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3471 CATTTGAAGAAAGTGGGTGTTGGGTTTGTTATGGGTTAAAGTGCTTTTGAAATAAGTAAATTATTAGTTTGATT 3544
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3545 TTCATTCTTGGCTACTTACACTATTCATGATAATCACAGAGATACTTGGACAAAGAAATATATTTGGGCAAAAG 3618
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3619 CAAGAATTTCCTTCTTTTTTTTTTTGAGACGGAGTCTAACTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATC 3692
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3693 TCGGCTCACTGCAAGGTCCACCTCCTGGGTTCCCACCATTCTCCTGCCTCAACCTCCCGAGTAGCTGGGACTAC 3766
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3767 AGGCGCCCGCCACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGATTTCACCGTGTTAGCCAGA 3840
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3841 ATGAAGAATTTCCTTCTGAAGTGGGAACATATGGCTCATGCTGGTAATCCCAGCACTTTGGGAGGCCAAGGTAG 3914
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3915 GAAGATCACTTGAGCCCAGGAGTTGGAGACCCATCTGTGCAACATAGTGAGACGCTGTCTGTACAAGAAACTTT 3988
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3989 TAAAAAATGTAGCTGGGCGTGGCAGTGTGCTCCTGTGGTCCCAGCTACTCGGAGCTGAGGCAGGACGACTGCTT 4062
Query 994 -------------------------------------------------------------------------- 993
Sbjct 4063 GAGCCCAGGAGGTCGAGGCTACAGTGAGCTGTGACGGCTCCACTGCATTCCAGCCTGGGAGACAGCAAGATACT 4136
Query 994 -------------------------------------------------------------------------- 993
Sbjct 4137 GTCTCAAAAAAAAATTTATCATTGAAGCCTGGGCATTTTAAAAAAATAAAAAGGTGGGAAAATACGTGGGCACA 4210
Query 994 -------------------------------------------------------------------------- 993
Sbjct 4211 GCAGTGAATCCTCACACCCTGGGCTTTGCCCAAGAAGTGCTCGTGAACCTGATGAAAGTGTCGGGTGTGGCCGA 4284
Query 994 -------------------------------------------------------------------------- 993
Sbjct 4285 CGTGAGGCTGTTCCAGGAGCCACGAGGGGTGATTGGTTCCGCTAGAAGGTTCCAGGGAGGAACTGGAGTCTCAG 4358
Query 994 -------------------------------------------------------------------------- 993
Sbjct 4359 GTGTGTCCTCTGATGAGTGATCTATTTTTAAGTAAAAGTGTTTCATTAAAGTCAAAGATGATTATTCCTTTCAA 4432
Query 994 ---------------------- 993
Sbjct 4433 AATAAAGAATCTAGGAGGGCGA 4454
