Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09043
- Subject:
- XR_001740287.1
- Aligned Length:
- 2358
- Identities:
- 1394
- Gaps:
- 963
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAGAAAGGTAAGGGCCCTGGGCGAGGAAAGCGCGGCCCTTTCCGAGTTTGGTGTTTTGCAGCGAAAGGAAATCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCTCTTCCGAAAGTCCTCCAGGGCGAGAGAGGAAAGGGCCTAGGTACTGTGCTGGGGTCGCACAGCCGGCCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GACAGTGCCGGGACGGGGAGCCAGGCTTCCGAGTGCGCCCGGTCACTGACTCCTCCGCGCTTTCCTCGTGCGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGCAGCCCTTGGTTCTTGGAAACGCCGGCGCCTTGTTCAGGGCTGGTGGGGCTGGGGCGCAAGGTGCAGCTGAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AATGCCCGAGAGGAGCCGCAGCCTCTGGTGGAGTTCGGTCGGGTGTGGGGGTAGTCAAGGAAAGAAGCAAAGGG 370
Query 1 -----------------ATGGCAGAAGCTGTTTTCCATGCCCCAAAGAGGAAAAGAAGAGTGTATGAGACTTAC 57
|||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AATACCTCCTCTGAAAAATGGCAGAAGCAGTTTTCCATGCCCCAAAGAGGAAAAGAAGAGTGTATGAGACTTAC 444
Query 58 GAGTCTCCATTGCCAATCCCTTTTGGTCAGGACCATGGTCCTCTGAAAGAATTCAAGATATTCCGTGCTGAAAT 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAGTCTCCATTGCCAATCCCTTTTGGTCAGGACCATGGTCCTCTGAAAGAATTCAAGATATTCCGTGCTGAAAT 518
Query 132 GATTAACAACAATGTGATTGTGAGGAATGCGGAGGACATTGAGCAGCTCTATGGGAAAGGTTATTTTGGAAAAG 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GATTAACAACAATGTGATTGTGAGGAATGCGGAGGACATTGAGCAGCTCTATGGGAAAGGTTATTTTGGAAAAG 592
Query 206 GTATTCTTTCAAGAAGCCGTCCAAGCTTCACAATTTCAGATCCTAAACTGGTTGCTAAATGGAAAGATATGAAG 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GTATTCTTTCAAGAAGCCGTCCAAGCTTCACAATTTCAGATCCTAAACTGGTTGCTAAATGGAAAGATATGAAG 666
Query 280 ACAAACATGCCTATCATCACATCAAAG----------------------------------------------- 306
|||||||||||||||||||||||||||
Sbjct 667 ACAAACATGCCTATCATCACATCAAAGAGGGGCCATTCTAAGTATATGTGCTGCCGCATCGAGCACTGTTCAGT 740
Query 307 ----------AGGTATCAGCATAGTGTTGAGTGGGCAGCAGAGCTGATGCGTAGACAGGGGCAGGATGAGAGTA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CTTCTTAACCAGGTATCAGCATAGTGTTGAGTGGGCAGCAGAGCTGATGCGTAGACAGGGGCAGGATGAGAGTA 814
Query 371 CAGTGCGCAGAATCCTCAAGGATTACACGAAACCGCTTGAGCATCCTCCTGTGAAAAGGAATGAAGAGGCTCAA 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CAGTGCGCAGAATCCTCAAGGATTACACGAAACCGCTTGAGCATCCTCCTGTGAAAAGGAATGAAGAGGCTCAA 888
Query 445 GTGCATGACAAGCTTAACTCTGGAATGGTTTCCAACATGGAAGGCACAGCAGGGGGAGAGAGACCTTCTGTGGT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GTGCATGACAAGCTTAACTCTGGAATGGTTTCCAACATGGAAGGCACAGCAGGGGGAGAGAGACCTTCTGTGGT 962
Query 519 AAACGGGGACTCTGGAAAGTCAGGTGGTGTGGGTGATCCCCGTGAGCCATTAGGCTGCCTGCAGGAGGGCTCTG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AAACGGGGACTCTGGAAAGTCAGGTGGTGTGGGTGATCCCCGTGAGCCATTAGGCTGCCTGCAGGAGGGCTCTG 1036
Query 593 GCTGCCACCCAACAACAGAGAGCTTTGAGAAAAGCGTGCGAGAGGATGCCTCACCTCTGCCCCATGTCTGTTGC 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GCTGCCACCCAACAACAGAGAGCTTTGAGAAAAGCGTGCGAGAGGATGCCTCACCTCTGCCCCATGTCTGTTGC 1110
Query 667 TGCAAACAAGATGCTCTCATCCTCCAGCGTGGCCTTCATCATGAAGACGGCAGCCAGCACATCGGCCTCCTGCA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TGCAAACAAGATGCTCTCATCCTCCAGCGTGGCCTTCATCATGAAGACGGCAGCCAGCACATCGGCCTCCTGCA 1184
Query 741 TCCTGGGGACAGAGGGCCTGACCATGAGTACGTGCTGGTCGAGGAAGCGGAGTGTGCCATGAGCGAGAGGGAGG 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TCCTGGGGACAGAGGGCCTGACCATGAGTACGTGCTGGTCGAGGAAGCGGAGTGTGCCATGAGCGAGAGGGAGG 1258
Query 815 CTGCCCCAAATGAGGAATTGGTGCAAAGAAACAGGTTAATATGCAGAAGAAATCCATATAGGATCTTTGAGTAT 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CTGCCCCAAATGAGGAATTGGTGCAAAGAAACAGGTTAATATGCAGAAGAAATCCATATAGGATCTTTGAGTAT 1332
Query 889 TTGCAACTCAGCCTAGAAGAGGCCTTTTTCTTGGTCTATGCTCTGGGATGTTTAAGTATTTACTATGAGAAGGA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TTGCAACTCAGCCTAGAAGAGGCCTTTTTCTTGGTCTATGCTCTGGGATGTTTAAGTATTTACTATGAGAAGGA 1406
Query 963 GCCTTTAACGATAGTGAAGCTCTGGAAAGCTTTCACTGTAGTTCAGCCCACGTTCAGAACCACCTACATGGCCT 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GCCTTTAACGATAGTGAAGCTCTGGAAAGCTTTCACTGTAGTTCAGCCCACGTTCAGAACCACCTACATGGCCT 1480
Query 1037 ACCATTACTTTCGAAGCAAGGGCTGGGTGCCCAAAGTGGGACTCAAGTACGGGACAGATTTACTGCTATATCGG 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 ACCATTACTTTCGAAGCAAGGGCTGGGTGCCCAAAGTGGGACTCAAGTACGGGACAGATTTACTGCTATATCGG 1554
Query 1111 AAAGGCCCTCCATTTTACCATGCAAGTTATTCTGTCATTATCGAGCTAGTTGATGACCATTTTGAAGGCTCTCT 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 AAAGGCCCTCCATTTTACCATGCAAGTTATTCTGTCATTATCGAGCTAGTTGATGACCATTTTGAAGGCTCTCT 1628
Query 1185 CCGCAGGCCTCTCAGTTGGAAGTCCCTGGCTGCCTTGAGCAGAGTTTCCGTTAATGTCTCTAAGGAACTTATGC 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CCGCAGGCCTCTCAGTTGGAAGTCCCTGGCTGCCTTGAGCAGAGTTTCCGTTAATGTCTCTAAGGAACTTATGC 1702
Query 1259 TGTGCTATTTGATTAAACCCTCTACTATGACTGACAAGGAAATGGAGTCACCAGAATGTATGAAAAGGATTAAA 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TGTGCTATTTGATTAAACCCTCTACTATGACTGACAAGGAAATGGAGTCACCAGAATGTATGAAAAGGATTAAA 1776
Query 1333 GTTCAGGAGGTGATTCTGAGTCGATGGGTTTCTTCACGAGAGAGGAGTGACCAAGACGATCTT----------- 1395
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GTTCAGGAGGTGATTCTGAGTCGATGGGTTTCTTCACGAGAGAGGAGTGACCAAGACGATCTTTAACAATTCAA 1850
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 1851 CCTCAAATTTCTAATTTCACCAACAACTATTTATTGAGGGCTAGTCTCGCTCTGTCGTCCAGGCTGGAGTCCAA 1924
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 1925 TGCTGCGATCTTGGATCACTGCAACCTCTGCCTGCTGGGTTTAAGCGATTCTCATGCCTCAGCCTCCTGAGTAG 1998
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 1999 CTGGGATTACAGGCACGCACCACCACACACGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACTATGTT 2072
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 2073 GGCCAGGCTGGTCTGGAACTCCTGACCTCAAGTGATCTGCCCGCCTTGGCCTCCCAAAGTGCTGAGAGTACAGG 2146
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 2147 CGTGAGCCACTGCATCCAGCTCTTAGCATGTGCTTTTAAAGTAAAAACCACGAGGAGAAGGTACTCATTACTTC 2220
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 2221 ATAACTTGTGTCTCACCCACCTTGCTGTCTTCACATCCCCACTTTCTGTATGCACATTGGAAGGTGAATTTGTT 2294
Query 1396 ---------------------------------------------------------------- 1395
Sbjct 2295 CAGCTCACATTAATTTATAGGAATAATTTTCATTGCTCTGTGAATAAAATGTGCTACCACTTTA 2358
