Nucleotide Global Alignment

Description

Query:
ccsbBroad304_09109
Subject:
XM_011545295.2
Aligned Length:
2001
Identities:
1448
Gaps:
552

Alignment

Query    1  ATGGCGGGGATGAAGACAGCCTCCGGGGACTACATCGACTCGTCATGGGAGCTGCGGGTGTTTGTGGGAGAGGA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GGACCCAGAGGCCGAGTCGGTCACCCTGCGGGTCACTGGGGAGTCGCACATCGGCGGGGTGCTCCTGAAGATTG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TGGAGCAGATCAATCGCAAGCAGGACTGGTCAGACCATGCTATTTGGTGGGAACAGAAGAGGCAGTGGCTGCTG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CAGACCCACTGGACACTGGACAAGTACGGGATCCTGGCCGACGCACGCCTCTTCTTTGGGCCCCAGCACCGGCC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CGTCATCCTTCGGTTGCCCAACCGCCGCGCACTGCGCCTCCGTGCCAGCTTCTCCCAGCCCCTCTTCCAGGCTG  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  TGGCTGCCATCTGCCGCCTCCTCAGCATCCGGCACCCCGAGGAGCTGTCCCTGCTCCGGGCTCCTGAGAAGAAG  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  GAGAAGAAGAAGAAAGAGAAGGAGCCAGAGGAAGAGCTCTATGACTTGAGCAAGGTTGTCTTGGCTGGGGGCGT  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  GGCACCTGCACTGTTCCGGGGGATGCCAGCTCACTTCTCGGACAGCGCCCAGACTGAGGCCTGCTACCACATGC  592
                                  ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ----------------------ATGCCAGCTCACTTCTCGGACAGCGCCCAGACTGAGGCCTGCTACCACATGC  52

Query  593  TGAGCCGGCCCCAGCCGCCACCCGACCCCCTCCTGCTCCAGCGTCTGCCACGGCCCAGCTCCCTGTCAGACAAG  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   53  TGAGCCGGCCCCAGCCGCCACCCGACCCCCTCCTGCTCCAGCGTCTGCCACGGCCCAGCTCCCTGTCAGACAAG  126

Query  667  ACCCAGCTCCACAGCAGGTGGCTGGACTCGTCGCGGTGTCTCATGCAGCAGGGCATCAAGGCTGGGGACGCACT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct  127  ACCCAGCTCCACAGCAGGTGGCTGGACTCGTCGCGGTGTCTCATGCAGCAGGGCATCAAGGCCGGGGACGCACT  200

Query  741  CTGGCTGCGCTTCAAGTACTACAGCTTCTTCGATTTGGATCCCAAGACAGACCCCGTGCGGCTGACACAGCTGT  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  201  CTGGCTGCGCTTCAAGTACTACAGCTTCTTCGATTTGGATCCCAAGACAGACCCCGTGCGGCTGACACAGCTGT  274

Query  815  ATGAGCAGGCCCGGTGGGACCTGCTGCTGGAGGAGATTGACTGCACCGAGGAGGAGATGATGGTGTTTGCCGCC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  275  ATGAGCAGGCCCGGTGGGACCTGCTGCTGGAGGAGATTGACTGCACCGAGGAGGAGATGATGGTGTTTGCCGCC  348

Query  889  CTGCAGTACCACATCAACAAGCTGTCCCAGAGCGGGGAGGTGGGGGAGCCGGCTGGCACAGACCCAGGGCTGGA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  349  CTGCAGTACCACATCAACAAGCTGTCCCAGAGCGGGGAGGTGGGGGAGCCGGCTGGCACAGACCCAGGGCTGGA  422

Query  963  CGACCTGGATGTGGCCCTGAGCAACCTGGAGGTGAAGCTGGAGGGGTCGGCGCCCACAGATGTGCTGGACAGCC  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  423  CGACCTGGATGTGGCCCTGAGCAACCTGGAGGTGAAGCTGGAGGGGTCGGCGCCCACAGATGTGCTGGACAGCC  496

Query 1037  TCACCACCATCCCAGAGCTCAAGGACCATCTCCGAATCTTTC------------GGCCCCGGAAGCTGACCCTG  1098
            ||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||
Sbjct  497  TCACCACCATCCCAGAGCTCAAGGACCATCTCCGAATCTTTCGCATCCCACGAAGGCCCCGGAAGCTGACCCTG  570

Query 1099  AAGGGCTACCGCCAACACTGGGTGGTGTTCAAGGAGACCACACTGTCCTACTACAAGAGCCAGGACGAGGCCCC  1172
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  571  AAGGGCTACCGCCAACACTGGGTGGTGTTCAAGGAGACCACACTGTCCTACTACAAGAGCCAGGACGAGGCCCC  644

Query 1173  TGGGGACCCCATTCAGCAGCTCAACCTCAAGGGCTGTGAGGTGGTTCCCGATGTTAACGTCTCCGGCCAGAAGT  1246
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  645  TGGGGACCCCATTCAGCAGCTCAACCTCAAGGGCTGTGAGGTGGTTCCCGATGTTAACGTCTCCGGCCAGAAGT  718

Query 1247  TCTGCATTAAACTCCTAGTGCCCTCCCCTGAGGGCATGAGTGAGATCTACCTGCGGTGCCAGGATGAGCAGCAG  1320
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  719  TCTGCATTAAACTCCTAGTGCCCTCCCCTGAGGGCATGAGTGAGATCTACCTGCGGTGCCAGGATGAGCAGCAG  792

Query 1321  TATGCCCGCTGGATGGCTGGCTGCCGCCTGGCCTCCAAAGGCCGCACCATGGCCGACAGCAGCTACACCAGCGA  1394
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  793  TATGCCCGCTGGATGGCTGGCTGCCGCCTGGCCTCCAAAGGCCGCACCATGGCCGACAGCAGCTACACCAGCGA  866

Query 1395  GGTGCAGGCCATCCTGGCCTTCCTCAGCCTGCAGCGCACGGGCAGTGGGGGCCCGGGCAACCACCCCCACGGCC  1468
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  867  GGTGCAGGCCATCCTGGCCTTCCTCAGCCTGCAGCGCACGGGCAGTGGGGGCCCGGGCAACCACCCCCACGGCC  940

Query 1469  CTGATGCCTCTGCCGAGGGCCTCAACCCCTACGGCCTCGTTGCCCCCCGTTTCCAGCGAAAGTTCAAGGCCAAG  1542
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  941  CTGATGCCTCTGCCGAGGGCCTCAACCCCTACGGCCTCGTTGCCCCCCGTTTCCAGCGAAAGTTCAAGGCCAAG  1014

Query 1543  CAGCTCACCCCACGGATCCTGGAAGCCCACCAGAATGTGGCCCAGTTGTCGCTGGCAGAGGCCCAGCTGCGCTT  1616
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1015  CAGCTCACCCCACGGATCCTGGAAGCCCACCAGAATGTGGCCCAGTTGTCGCTGGCAGAGGCCCAGCTGCGCTT  1088

Query 1617  CATCCAGGCCTGGCAGTCCCTGCCCGACTTCGGCATCTCCTATGTCATGGTCAGGTTCAAGGGCAGCAGGAAAG  1690
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1089  CATCCAGGCCTGGCAGTCCCTGCCCGACTTCGGCATCTCCTATGTCATGGTCAGGTTCAAGGGCAGCAGGAAAG  1162

Query 1691  ACGAGATCCTGGGCATCGCCAACAACCGACTGATCCGCATCGACTTGGCCGTGGGCGACGTGGTCAAGACCTGG  1764
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1163  ACGAGATCCTGGGCATCGCCAACAACCGACTGATCCGCATCGACTTGGCCGTGGGCGACGTGGTCAAGACCTGG  1236

Query 1765  CGTTTCAGCAACATGCGCCAGTGGAATGTCAACTGGGACATCCGGCAGGTGGCCATCGAGTTTGATGAACACAT  1838
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1237  CGTTTCAGCAACATGCGCCAGTGGAATGTCAACTGGGACATCCGGCAGGTGGCCATCGAGTTTGATGAACACAT  1310

Query 1839  CAATGTGGCCTTCAGCTGCGTGTCTGCCAGCTGCCGAATTGTACACGAGTATATCGGGGGCTACATTTTCCTGT  1912
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1311  CAATGTGGCCTTCAGCTGCGTGTCTGCCAGCTGCCGAATTGTACACGAGTATATCGGGGGCTACATTTTCCTGT  1384

Query 1913  CGACGCGGGAGCGGGCCCGTGGGGAGGAGCTGGATGAAGACCTCTTCCTGCAGCTCACCGGGGGCCATGAGGCC  1986
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1385  CGACGCGGGAGCGGGCCCGTGGGGAGGAGCTGGATGAAGACCTCTTCCTGCAGCTCACCGGGGGCCATGAGGCC  1458

Query 1987  TTC  1989
            |||
Sbjct 1459  TTC  1461

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