Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09257
- Subject:
- XR_001748015.2
- Aligned Length:
- 1539
- Identities:
- 946
- Gaps:
- 549
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGTGTGAGCAAGAATTTCCTGCGGTTCCTCTAGGAAAATTCCTTTGTGCAGATCAGGCCCGTGGATTGGTGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGAATCCTAACCACGTCTTCCCTGGCCTGTCTTCACTCTTCTCCCCAGAATCACCACTTCTGCACTGGTGTCTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGGTGTATTGAGTGATTTTGTGGAGGGCAGAAGTAGGAAGTCTTTGGGACAAAACTGTATTTACCTTGGGATC 222
Query 1 --------------------------------------------------------ATGGCTTCTGGAATCCTG 18
||||||||||||||||||
Sbjct 223 TGTGAACAAGAGGAACCTCAGCAGCCAGGACAGGCAGGAGCAGTGGAATAGCTACTATGGCTTCTGGAATCCTG 296
Query 19 GTTAATGTAAAGGAGGAGGTGACCTGCCCCATCTGCCTGGAACTCCTGACACAACCCCTGAGCCTGGACTGCGG 92
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTTAATGTAAAGGAGGAGGTGACCTGCCCCATCTGCCTGGAACTCCTGACACAACCCCTGAGCCTGGACTGCGG 370
Query 93 CCACAGCTTCTGCCAAGCATGCCTCACTGCAAACCACAAGAAGTCCATGCTAGACAAAGGAGAGAGTAGCTGCC 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCACAGCTTCTGCCAAGCATGCCTCACTGCAAACCACAAGAAGTCCATGCTAGACAAAGGAGAGAGTAGCTGCC 444
Query 167 CTGTGTGCCGGATCAGTTACCAGCCTGAGAACATACGGCCTAATCGGCATGTAGCCAACATAGTGGAGAAGCTC 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTGTGTGCCGGATCAGTTACCAGCCTGAGAACATACGGCCTAATCGGCATGTAGCCAACATAGTGGAGAAGCTC 518
Query 241 AGGGAGGTCAAGTTGAGCCCAGAGGGGCAGAAAGTTGATCATTGTGCACGCCATGGAGAGAAACTTCTACTCTT 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGGGAGGTCAAGTTGAGCCCAGAGGGGCAGAAAGTTGATCATTGTGCACGCCATGGAGAGAAACTTCTACTCTT 592
Query 315 CTGTCAGGAGGACGGGAAGGTCATTTGCTGGCTTTGTGAGCGGTCTCAGGAGCACCGTGGTCACCACACGTTCC 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTGTCAGGAGGACGGGAAGGTCATTTGCTGGCTTTGTGAGCGGTCTCAGGAGCACCGTGGTCACCACACGTTCC 666
Query 389 TCACAGAGGAGGTTGCCCGGGAGTACCAAGTGAAGCTCCAGGCAGCTCTGGAGATGCTGAGGCAGAAGCAGCAG 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TCACAGAGGAGGTTGCCCGGGAGTACCAAGTGAAGCTCCAGGCAGCTCTGGAGATGCTGAGGCAGAAGCAGCAG 740
Query 463 GAAGCTGAAGAGTTGGAAGCTGACATCAGAGAAGAGAAAGCTTCCTGGAAGACTCAAATACAGTATGACAAAAC 536
||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GAAGCTGAAGAGTTAGAAGCTGACATCAGAGAAGAGAAAGCTTCCTGGAAGACTCAAATACAGTATGACAAAAC 814
Query 537 CAACGTCTTGGCAGATTTTGAGCAACTGAGAGACATCCTGGACTGGGAGGAGAGCAATGAGCTGCAAAACCTGG 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CAACGTCTTGGCAGATTTTGAGCAACTGAGAGACATCCTGGACTGGGAGGAGAGCAATGAGCTGCAAAACCTGG 888
Query 611 AGAAGGAGGAGGAAGACATTCTGAAAAGCCTTACGAACTCTGAAACTGAGATGGTGCAGCAGACCCAGTCCCTG 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AGAAGGAGGAGGAAGACATTCTGAAAAGCCTTACGAACTCTGAAACTGAGATGGTGCAGCAGACCCAGTCCCTG 962
Query 685 AGAGAGCTCATCTCAGATCTGGAGCATCGGCTGCAGGGGTCAGTGATGGAGCTGCTTCAGGGTGTGGATGGCGT 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AGAGAGCTCATCTCAGATCTGGAGCATCGGCTGCAGGGGTCAGTGATGGAGCTGCTTCAGGGTGTGGATGGCGT 1036
Query 759 CATAAAAAG----GACGGAGA------ACGTGAC--------CT--------TGAAGA-AGCCAG--------- 796
||||||||| ||| ||| |||..|| || |||||| || |||
Sbjct 1037 CATAAAAAGAGCTGAC--AGATGTCCGACGCTACTGGGAAGACTAGATGAGATGAAGAGAG-CAGTTGTCACAT 1107
Query 797 -------AAACT--------------------------------TTTCCAAAAAATCA------AAGGAG---- 821
|||.| |.||||.|.||||| ||.|||
Sbjct 1108 CTGGGTAAAAGTCTCATCATCAGGGCAAAGAACAGGTGGGAATGTATCCAGAGAATCAACATACAATGAGCAAA 1181
Query 822 AGTG-----TTTC---GAGCT----CCTGA--------------------------TCTGA--AAGGAA----- 850
|||| |||| || || |||.| ||||| ||||||
Sbjct 1182 AGTGAAGCTTTTCCTAGA-CTTGACCCTCATCAAATCTCCTCTGTCCCCACTCTCTTCTGAAGAAGGAAAGGTC 1254
Query 851 TGCTAGAA-----GT---GTTTAGAGAG-CTGACAGATGTCCGACGCTACTGGGGT------------------ 897
||.| ||| || |.|||..||| || ||||..||..| ||||.|||.|
Sbjct 1255 TGAT-GAATACATGTAAAGCTTATTGAGCCT--CAGAACTCTAA--CTACAGGGTTTCAATAGCACAGAAACTC 1323
Query 898 ----AAGGAGAAGTCACATTATCATAAG--CCACCCT---GCGGCTTAT------CATTATT---------ATT 947
|||.|.||| |.|.||| ||| ||.|||| |.|.||.|| || |.| |||
Sbjct 1324 TGAGAAGAAAAAG----AATGTCA-AAGTTCCTCCCTAAGGAGACTGATTAGATGCA--AGTGTGTCCGGAATT 1390
Query 948 ------ATCTT----TATCTTTTAGAAT-------------TTTATGTTCTCTATTAGGCTCATGT--TTTAAG 996
.|||| |..|||..||||| .|.|.|.|...||||| || || ||.|||
Sbjct 1391 GGTGGGTTCTTGGTCTGACTTCAAGAATGAAGCCGCGGACCCTCACGGTGAGTATTA----CA-GTTCTTGAAG 1459
Query 997 A--------------TTTATGATTCTCCTTCCAAGACACACATAACTTACCCCTCCTTA 1041
| |||.| ||||||..|
Sbjct 1460 ACTGCGTGTCCAGAGTTTGT-----TCCTTCTGA------------------------- 1488