Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09257
- Subject:
- XR_001748018.2
- Aligned Length:
- 1497
- Identities:
- 927
- Gaps:
- 517
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGTGTGAGCAAGAATTTCCTGCGGTTCCTCTAGGAAAATTCCTTTGTGCAGATCAGGCCCGTGGATTGGTGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGAATCCTAACCACGTCTTCCCTGGCCTGTCTTCACTCTTCTCCCCAGAATCACCACTTCTGCACTGGTGTCTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGGTGTATTGAGTGATTTTGTGGAGGGCAGAAGTAGGAAGTCTTTGGGACAAAACTGTATTTACCTTGGGATC 222
Query 1 --------------------------------------------------------ATGGCTTCTGGAATCCTG 18
||||||||||||||||||
Sbjct 223 TGTGAACAAGAGGAACCTCAGCAGCCAGGACAGGCAGGAGCAGTGGAATAGCTACTATGGCTTCTGGAATCCTG 296
Query 19 GTTAATGTAAAGGAGGAGGTGACCTGCCCCATCTGCCTGGAACTCCTGACACAACCCCTGAGCCTGGACTGCGG 92
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTTAATGTAAAGGAGGAGGTGACCTGCCCCATCTGCCTGGAACTCCTGACACAACCCCTGAGCCTGGACTGCGG 370
Query 93 CCACAGCTTCTGCCAAGCATGCCTCACTGCAAACCACAAGAAGTCCATGCTAGACAAAGGAGAGAGTAGCTGCC 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCACAGCTTCTGCCAAGCATGCCTCACTGCAAACCACAAGAAGTCCATGCTAGACAAAGGAGAGAGTAGCTGCC 444
Query 167 CTGTGTGCCGGATCAGTTACCAGCCTGAGAACATACGGCCTAATCGGCATGTAGCCAACATAGTGGAGAAGCTC 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTGTGTGCCGGATCAGTTACCAGCCTGAGAACATACGGCCTAATCGGCATGTAGCCAACATAGTGGAGAAGCTC 518
Query 241 AGGGAGGTCAAGTTGAGCCCAGAGGGGCAGAAAGTTGATCATTGTGCACGCCATGGAGAGAAACTTCTACTCTT 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGGGAGGTCAAGTTGAGCCCAGAGGGGCAGAAAGTTGATCATTGTGCACGCCATGGAGAGAAACTTCTACTCTT 592
Query 315 CTGTCAGGAGGACGGGAAGGTCATTTGCTGGCTTTGTGAGCGGTCTCAGGAGCACCGTGGTCACCACACGTTCC 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTGTCAGGAGGACGGGAAGGTCATTTGCTGGCTTTGTGAGCGGTCTCAGGAGCACCGTGGTCACCACACGTTCC 666
Query 389 TCACAGAGGAGGTTGCCCGGGAGTACCAAGTGAAGCTCCAGGCAGCTCTGGAGATGCTGAGGCAGAAGCAGCAG 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TCACAGAGGAGGTTGCCCGGGAGTACCAAGTGAAGCTCCAGGCAGCTCTGGAGATGCTGAGGCAGAAGCAGCAG 740
Query 463 GAAGCTGAAGAGTTGGAAGCTGACATCAGAGAAGAGAAAGCTTCCTGGAAGACTCAAATACAGTATGACAAAAC 536
||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GAAGCTGAAGAGTTAGAAGCTGACATCAGAGAAGAGAAAGCTTCCTGGAAGACTCAAATACAGTATGACAAAAC 814
Query 537 CAACGTCTTGGCAGATTTTGAGCAACTGAGAGACATCCTGGACTGGGAGGAGAGCAATGAGCTGCAAAACCTGG 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CAACGTCTTGGCAGATTTTGAGCAACTGAGAGACATCCTGGACTGGGAGGAGAGCAATGAGCTGCAAAACCTGG 888
Query 611 AGAAGGAGGAGGAAGACATTCTGAAAAGCCTTACGAACTCTGAAACTGAGATGGTGCAGCAGACCCAGTCCCTG 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AGAAGGAGGAGGAAGACATTCTGAAAAGCCTTACGAACTCTGAAACTGAGATGGTGCAGCAGACCCAGTCCCTG 962
Query 685 AGAGAGCTCATCTCAGATCTGGAGCATCGGCTGCAGGGGTCAGTGATGGAGCTGCTTCAG-------GGTGTGG 751
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |.|| .|
Sbjct 963 AGAGAGCTCATCTCAGATCTGGAGCATCGGCTGCAGGGGTCAGTGATGGAGCTGCTTCAGAAGACTAGATG-AG 1035
Query 752 ATG------GC----GTCA--------TAAAA-----------AGGACGGAGAAC--GTG-------------- 780
||| || |||| ||||| |||.|..||||| |||
Sbjct 1036 ATGAAGAGAGCAGTTGTCACATCTGGGTAAAAGTCTCATCATCAGGGCAAAGAACAGGTGGGAATGTATCCAGA 1109
Query 781 ------ACCTTGAAGAAGCCA----GAAACTTTTCCAAAA---------AATCAAAGGAGAGTGTTTCGAGCTC 835
||.|..||..|||.| |||.|||||||.|.| .|||||| |.|| |||
Sbjct 1110 GAATCAACATACAATGAGCAAAAGTGAAGCTTTTCCTAGACTTGACCCTCATCAAA--------TCTC---CTC 1172
Query 836 ----------CTGATCTGA--AAGGAA-----TGCTAGAA-----GT---GTTTAGAGAG-CTGACAGATGTCC 883
||..||||| |||||| ||.| ||| || |.|||..||| || ||||..||.
Sbjct 1173 TGTCCCCACTCTCTTCTGAAGAAGGAAAGGTCTGAT-GAATACATGTAAAGCTTATTGAGCCT--CAGAACTCT 1243
Query 884 GACGCTACTGGGGT----------------------AAGGAGAAGTCACATTATCATAAG--CCACCCT---GC 930
.| ||||.|||.| |||.|.||| |.|.||| ||| ||.|||| |.
Sbjct 1244 AA--CTACAGGGTTTCAATAGCACAGAAACTCTGAGAAGAAAAAG----AATGTCA-AAGTTCCTCCCTAAGGA 1310
Query 931 GGCTTAT------CATTATT---------ATT------ATCTT----TATCTTTTAGAAT-------------T 966
|.||.|| || |.| ||| .|||| |..|||..||||| .
Sbjct 1311 GACTGATTAGATGCA--AGTGTGTCCGGAATTGGTGGGTTCTTGGTCTGACTTCAAGAATGAAGCCGCGGACCC 1382
Query 967 TTATGTTCTCTATTAGGCTCATGT--TTTAAGA--------------TTTATGATTCTCCTTCCAAGACACACA 1024
|.|.|.|...||||| || || ||.|||| |||.| ||||||.
Sbjct 1383 TCACGGTGAGTATTA----CA-GTTCTTGAAGACTGCGTGTCCAGAGTTTGT-----TCCTTCT---------- 1436
Query 1025 TAACTTACCCCTCCTTA 1041
Sbjct 1437 ----------------- 1436