Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09276
- Subject:
- XR_001748024.2
- Aligned Length:
- 4354
- Identities:
- 1706
- Gaps:
- 2630
Alignment
Query 1 ---------------------------------------ATGGCGGGGCCGGGCGTCCCCGGTGCCCCCGCAGC 35
|||||||||||||||||||||||||||||||||||
Sbjct 1 GGGCGGGAGGAACGCGCCGCTAGGCGGGAGAGCGCGGCCATGGCGGGGCCGGGCGTCCCCGGTGCCCCCGCAGC 74
Query 36 GCGCTGGAAACGCCACATCGTGCGGCAGCTGCGGCTTCGGGACCGTACGCAAAAGGCGCTTTTCCTGGAGCTGG 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCGCTGGAAACGCCACATCGTGCGGCAGCTGCGGCTTCGGGACCGTACGCAAAAGGCGCTTTTCCTGGAGCTGG 148
Query 110 TGCCGGCCTATAACCATCTCTTAGAGAAGGCTGAGCTGCTGGACAAGTTCTCAAAGAAGCTGCAGCCGGAGCCA 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGCCGGCCTATAACCATCTCTTAGAGAAGGCTGAGCTGCTGGACAAGTTCTCAAAGAAGCTGCAGCCGGAGCCA 222
Query 184 AACAGTGTCACTCCCACCACCCACCAGGGCCCCTGGGAGGAGTCAGAGCTTGACTCAGACCAAGTCCCATCACT 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AACAGTGTCACTCCCACCACCCACCAGGGCCCCTGGGAGGAGTCAGAGCTTGACTCAGACCAAGTCCCATCACT 296
Query 258 GGTCGCACTGAGGGTGAAGTGGCAGGAGGAGGAGGAGGGGCTCCGGCTGGTCTGTGGTGAGATGGCCTACCAGG 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGTCGCACTGAGGGTGAAGTGGCAGGAGGAGGAGGAGGGGCTCCGGCTGGTCTGTGGTGAGATGGCCTACCAGG 370
Query 332 TGGTGGAGAAGGGCGCGGCCCTGGGCACGCTGGAGTCGGAGCTGCAGCAGAGGCAAAGCAGGCTGGCAGCCCTG 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGGTGGAGAAGGGCGCGGCCCTGGGCACGCTGGAGTCGGAGCTGCAGCAGAGGCAAAGCAGGCTGGCAGCCCTG 444
Query 406 GAGGCCCGCGTGGCGCAGCTGCGAGAGGCGCGGGCGCAGCAGGCCCAGCAGGTGGAGGAGTGGCGGGCGCAGAA 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAGGCCCGCGTGGCGCAGCTGCGAGAGGCGCGGGCGCAGCAGGCCCAGCAGGTGGAGGAGTGGCGGGCGCAGAA 518
Query 480 TGCGGTGCAGCGGGCAGCCTACGAGGCGCTGCGCGCGCACGTCGGGCTCCGGGAGGCGGCACTGCGCAGGCTCC 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGCGGTGCAGCGGGCAGCCTACGAGGCGCTGCGCGCGCACGTCGGGCTCCGGGAGGCGGCACTGCGCAGGCTCC 592
Query 554 AGGAAGAGGCGCGCGACCTGCTGGAGAGGCTCGTGCAGCGCAAGGCGCGCGCCGCGGCCGAGCGCAACCTGCGC 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGGAAGAGGCGCGCGACCTGCTGGAGAGGCTCGTGCAGCGCAAGGCGCGCGCCGCGGCCGAGCGCAACCTGCGC 666
Query 628 AACGAGCGCCGGGAGCGGGCCAAGCAGGCGCGGGTGTCCCAGGAGCTGAAGAAGGCTGCCAAGCGGACCGTGAG 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AACGAGCGCCGGGAGCGGGCCAAGCAGGCGCGGGTGTCCCAGGAGCTGAAGAAGGCTGCCAAGCGGACCGTGAG 740
Query 702 CATCAGCGAGGGCCCGGACACCCTAGGCGATTGGATGAGGGAGAGAAGGGAGACTCTGGCTCTGGCCCCTGAGC 775
|||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CATCAGCGAGGGCCCGGACACCCTAGGCGATGGGATGAGGGAGAGAAGGGAGACTCTGGCTCTGGCCCCTGAGC 814
Query 776 CAGAGCCCCTGGAGAAGGAAGCTTGTGAGAAGTGGAAGAGGCCCTTCAGGTCTGCCTCAGCCACCTCCCTGACG 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CAGAGCCCCTGGAGAAGGAAGCTTGTGAGAAGTGGAAGAGGCCCTTCAGGTCTGCCTCAGCCACCTCCCTGACG 888
Query 850 CTGTCCCACTGTGTGGATGTGGTGAAGGGGCTTCTGGATTTTAAGAAGAGGAGAGGTCACTCAATTGGGGGAGC 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTGTCCCACTGTGTGGATGTGGTGAAGGGGCTTCTGGATTTTAAGAAGAGGAGAGGTCACTCAATTGGGGGAGC 962
Query 924 CCCTGAGCAGCGATACCAGATCATCCCTGTGTGTGTGGCTGCCCGACTTCCTACCCGGGCTCAGGATGTGCTGG 997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CCCTGAGCAGCGATACCAGATCATCCCTGTGTGTGTGGCTGCCCGACTTCCTACCCGGGCTCAGGATGTGCTGG 1036
Query 998 ATGCCCACCTCTCTGAGGTCAATGCTGTTCGTTTTGGCCCCAACAGCAGCCTCCTGGCCACTGGAGGGGCTGAC 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATGCCCACCTCTCTGAGGTCAATGCTGTTCGTTTTGGCCCCAACAGCAGCCTCCTGGCCACTGGAGGGGCTGAC 1110
Query 1072 CGCCTGATCCACCTCTGGAATGTTGTGGGAAGTCGCCTGGAGGCCAACCAGACCCTGGAGGGAGCTGGTGGCAG 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CGCCTGATCCACCTCTGGAATGTTGTGGGAAGTCGCCTGGAGGCCAACCAGACCCTGGAGGGAGCTGGTGGCAG 1184
Query 1146 CATCACCAGTGTGGACTTTGACCCCTCGGGCTACCAGGTTTTAGCAGCAACTTACAACCAGGCTGCCCAGCTCT 1219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CATCACCAGTGTGGACTTTGACCCCTCGGGCTACCAGGTTTTAGCAGCAACTTACAACCAGGCTGCCCAGCTCT 1258
Query 1220 GGAAGGTGGGGGAGGCACAGTCCAAGGAGACACTGTCTGGACACAAGGATAAGGTGACAGCTGCCAAATTCAAG 1293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GGAAGGTGGGGGAGGCACAGTCCAAGGAGACACTGTCTGGACACAAGGATAAGGTGACAGCTGCCAAATTCAAG 1332
Query 1294 CTAACGAGGCACCAGGCAGTGACTGGGAGCCGCGACCGGACAGTGAAGGAGTGGGACCTCGGCCGTGCCTATTG 1367
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CTAACGAGGCACCAGGCAGTGACTGGGAGCCGCGACCGGACAGTGAAGGAGTGGGACCTCGGCCGTGCCTATT- 1405
Query 1368 CTCCAGGACCATCAATGTCCTTTCCTACTGTAATGACGTGGTGTGTGGGGACCATATCATCATTAGTGGCCACA 1441
Sbjct 1406 -------------------------------------------------------------------------- 1405
Query 1442 ATGACCAGAAGATCCGGTTCTGGGACAGCAGGGGGCCCCACTGCACCCAGGTCATCCCTGTGCAGGGCCGGGTC 1515
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1406 -------------------------------GGGGCCCCACTGCACCCAGGTCATCCCTGTGCAGGGCCGGGTC 1448
Query 1516 ACCTCCCTGAGCCTCAGCCACGACCAACTGCACCTGCTCAGCTGTTCCCGAGACAACACACTCAAGGTCATCGA 1589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1449 ACCTCCCTGAGCCTCAGCCACGACCAACTGCACCTGCTCAGCTGTTCCCGAGACAACACACTCAAGGTCATCGA 1522
Query 1590 CCTGCGTGTCAGCAACATCCGCCAGGTGTTCAGGGCCGATGGCTTCAAGTGTGGTTCTGACTGGACCAAAGCTG 1663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1523 CCTGCGTGTCAGCAACATCCGCCAGGTGTTCAGGGCCGATGGCTTCAAGTGTGGTTCTGACTGGACCAAAGCTG 1596
Query 1664 TGTTCAGCCCGGACAGAAGCTATGCACTGGCAGGCTCCTGTGATGGGGCCCTTTACATCTGGGATGTGGACACC 1737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1597 TGTTCAGCCCGGACAGAAGCTATGCACTGGCAGGCTCCTGTGATGGGGCCCTTTACATCTGGGATGTGGACACC 1670
Query 1738 GGGAAACTGGAGAGCAGACTACAGGGACCCCATTGCGCTGCCGTCAACGCCGTGGCCTGGTGCTACTCCGGGAG 1811
||||||||||||||||||||||||||||||||||| || .||||...|| |||
Sbjct 1671 GGGAAACTGGAGAGCAGACTACAGGGACCCCATTG-------GT----------ACCTGAATCT-CTC------ 1720
Query 1812 CCA--CATGGTGAGCGTGGACCA-------GGGCAGGAAGGTTGTGCTCTGGCAG------------------- 1857
.|| |||| |||.|| .|||| .|||.|.|||.|..|.|.||.|||.
Sbjct 1721 TCATCCATG--GAGTGT-CACCATTTTCTGAGGCTGAAAGTTCTTCCACTAGCACCGATGGGAAAACTCCAATA 1791
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 1792 CGCCCATTGAATTCCCCTTCCCAGAAGCCATCATCATCTTGGTTTTCTTTGTTCAAGATACGGATTATTGCTCC 1865
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 1866 CTCAGGAAAAGATAACTCATCATCTGTCTGGCCCTCATAATCATAAAGTGCTTTCACAAAACATACTAGGGAGC 1939
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 1940 AAGAGAAAAACAAATCTGGTAAGATAATTAACAGCCGGTTGCTTTTGCAACCACCCCTATGCTCACATGACAAC 2013
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 2014 TAAAAGAGCATCATACAGAATAGGATTAAAGTTGTAATTTTTTTACTCACTGATGAATGATTAACTTTAGGGTT 2087
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 2088 CTACTGTGCAGGACAAACGTGACCATATAAAGAAAAGCATATTATAGGACAGGAGGAAAGTTGTGCTTTTTATC 2161
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 2162 CTACTGAAGGCTTACTCCAGGGCAATACAGTTTAGGTCAAACGTGACCAAATAAAGAGTGCCTTGTTTCAGTCT 2235
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 2236 TTACCACTGGCATCTCCGTTGAGGCTGCCTGAAACGAGTTCTGCTTCCGTGGAATTGCTGGACGTGTGTGACCG 2309
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 2310 ACTGTCCAAAGCGGCCAGGGACTGCAGCATGCTCAGGAGGCTGTTCGAGGTGGGAAACTGTAGGTACTTTTCTG 2383
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 2384 GCACATAACCCACTTGGCCAACTTTATTTCGAGCCTGGGTAAAAGACATGTGACAAAACAAGTTTACACACACA 2457
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 2458 ATTTAGACAGGGCACAACAAAGACCAAAACAAACTCCTAAAAATGTCACAAGAAAGGGCGATATGAGCAAAGGA 2531
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 2532 ATATACCTTTACCCAGTCTTCCATATCTCCATCTTCAATCACTTCTAACACCTCATGTTCCTCAATGGTCAACT 2605
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 2606 CATCTGGTTGAGAAGCCTGCAGTGTAGGATGGTCATGGACAAAATTAAAAAGGTTAGATAAGGAGCAGATGTGA 2679
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 2680 GCTGATCATGACAAAAACTGGGGATCAAAATATTGAAATGATTTTGAGAAACATGTTGAACATAAAAATTTAAA 2753
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 2754 TGCTGTAAAACTTTCATAATGAGGTGAAGTTTTACTTTAAAAAACTAAACAGAATAAAACCATAACAAAAACTC 2827
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 2828 AAGAAACTGAATCCTCAAGAGGCAATGACGTTCAATGAACAGAACATGTAAGCCTGGGCAACACAGCGAGACCC 2901
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 2902 CCATCTCTACCAATAAATAAATAAATAAGTAAATAAATAAATAAAATTAGTCAGGCATGGTGGAACATGCCTGT 2975
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 2976 AGTCCCAACTACTTGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCTGGGAGGTTGAGGCTGCAGTGAGCCATGA 3049
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 3050 GTGAGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACCCTGTCTCTAAAAAAACAAACAAAAAAAGAGAGCA 3123
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 3124 CTTCCTGGAAGTAGAGGACCTGGGTTCCAACTCCAGCTTCTGTATCAAGTTATTCAACTTGATGCCTCCATTTC 3197
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 3198 TTTGAAATGACAATCCTGCCATTTTCTGGAGGATGTGAGTCAATGTGGGATGGATAAGCACAGAACTGTGATGA 3271
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 3272 TTTGGGAAGCAAAGGCAAACGAGAAGGCACTGAATTGGAACTGCTACCAGAGGGCTCCCATGGACAAGCATGCA 3345
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 3346 GTGAAAATGCAAAGAACTATGTACGTGAATTTGATGATAGTGGGTGCAGTGCCTAGGATTGATCTGGAATCACT 3419
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 3420 GTAAAGCAGTGGCCAAAAGAAAAAAATTGTAGGAAAGGAAATGATTGAGATCAGTCATGGTTTGGATTTCTTAT 3493
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 3494 GCTCCAACTTAACTGTGTGGAGACTGAGCTGATCCATTTGCGTGCTACCGTACAAGCTGCTAACCATAATGGTT 3567
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 3568 TTATTATCCCTGACAGCAGCAATCCACCAGCATCAGCCACCCACATGTTGCCCTTGAGACTGCCAAATCTGTAA 3641
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 3642 ACGCTCTGAGGCTCCACAGAGGGGCTGGAAAGTCCGTGTGGCTTTGCTTCCTAACAGTCTTGCCTGTCATGTGT 3715
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 3716 AATAGACAGGGGCCTGCTGGCTTCTGGCTCTCTAGAAAACAGTCTTAAAAGCTTTCCCCAAGTCCCAAGATGGG 3789
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 3790 TTAAAACCATCACCTAAAACCATAAAGTTTTTAAAATCTCACAATCTCAAAATGTAAAATTAACTCCAAGTTAC 3863
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 3864 ACAAACAAAAATAAGGCAAAAAAGGGGTCATTTTCAAGATCAATTTCCCATTTTATGAACATTAAAACATTTCA 3937
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 3938 TCAAAATCCAGATTCTGGATGTTGCCATAGCTCCCTGAGACAGAAAAATAATATTGAGGAAAAAACCCCACTCA 4011
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 4012 TTTACCCTTGATAGCTTTTCCAATGGAATTCCTTCACTACTCTGAAACCACACTATGCCTTGAATATGCCAGCA 4085
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 4086 AAAGGCATTTTTGTAATAAAAATGTTTTTCATGGCAAGACCTAAAAAGTATCAACACGACCAGACGTTAATGTA 4159
Query 1858 -------------------------------------------------------------- 1857
Sbjct 4160 TGTGACAGCAAACCAGGGAGGTAGTACACTTTTAAATAAACTGCTGCCCTTATAAAAAGCTA 4221
