Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09284
- Subject:
- XM_011248161.1
- Aligned Length:
- 3204
- Identities:
- 1428
- Gaps:
- 1581
Alignment
Query 1 ATGTTCACCCTGTCTCAGACCTCGAGAGCATGGTTCATCGATAGAGCCCGTCAGGCACGAGAAGAAAGGCTTGT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GCAGAAGGAACGGGAGCGGGCAGCTGTTGTGATCCAGGCCCATGTCCGGAGTTTTCTCTGTCGGAGTCGACTGC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AGAGAGATATCAGGAGAGAGATTGATGACTTTTTTAAAGCAGATGACCCTGAGTCCACTAAAAGAAGTGCACTT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TGTATTTTCAAGATTGCCAGGAAACTGCTGTTCCTATTCAGAATCAAAGAGGATAATGAGAGATTTGAGAAGTT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GTGTCGCAGCATCCTGAGCAGCATGGATGCTGAGAATGAGCCTAAGGTGTGGTATGTGTCCCTGGCTTGTTCTA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AGGACCTCACCCTCCTTTGGATTCAACAGATCAAGAACATTTTGTGGTACTGCTGTGATTTTCTCAAGCAGCTC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 AAGCCTGAAATCCTGCAGGACTCCCGACTCATCACCCTGTACCTCACGATGCTTGTCACCTTCACAGACACTTC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 AACGTGGAAAATTCTTCGGGGAAAAGGTGAAAGTCTTCGACCAGCGATGAACCACATTTGTGCAAATATAATGG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GACATCTCAACCAGCATGGATTTTATTCTGTGCTGCAGATATTGTTAACCCGTGGCCTGGCAAGACCCCGTCCT 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 TGTCTATCCAAAGGCACTTTAACAGCAGCTTTTTCTCTAGCGTTACGCCCTGTGATTGCTGCACAGTTCTCAGA 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 CAATCTGATTCGGCCGTTCCTCATCCACATCATGTCTGTGCCTGCTCTGGTGACTCATCTCAGCACAGTGACCC 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 CTGAGCGCCTCACTGTTTTAGAATCCCATGACATGCTTCGTAAATTCATCATATTTTTAAGAGACCAAGATCGA 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 TGCCGTGATGTATGTGAAAGTTTAGAAGGATGCCATACGCTTTGTCTAATGGGCAACCTCCTACACTTGGGCTC 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 CCTCAGCCCCAGAGTGTTAGAGGAGGAGACAGATGGGTTCGTGAGTTTGCTCACCCAGACGCTGTGCTACTGTC 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 AGAAGTATGTGTCTCAGAAGAAGTCCAACCTGACCCACTGGCATCCTGTCCTTGGCTGGTTCTCCCAATCTGTG 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 GATTATGGCCTTAACGAGTCAATGCACTTGATCACCAAACAGCTGCAGTTCTTGTGGGGGGTGCCTCTGATCCG 1184
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1185 GATCTTCTTCTGTGACATCCTGAGCAAGAAGCTACTGGAGAGCCAGGAGCCAGCCCACGCACAGCCAGCATCCC 1258
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1259 CTCAGAATGTGCTCCCAGTGAAGAGTCTCCTAAAGCGTGCTTTTCAAAAGTCGGCATCAGTCCGGAATATTCTC 1332
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1333 AGGCCTGTCGGGGGTAAACGGGTCGACTCTGCAGAAGTCCAGAAGGTTTGCAACATCTGTGTCCTCTACCAGAC 1406
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1407 CTCGCTGACAACTCTCACACAGATTCGGCTGCAGATACTCACAGGTCTCACTTACCTTGATGACCTGCTTCCCA 1480
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1481 AACTGTGGGCATTTATCTGTGAGCTCGGGCCCCACGGAGGGTTAAAGCTCTTCTTGGAATGCCTGAACAATGAC 1554
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1555 ACTGAAGAGTCCAAGCAACTCTTGGCCATGCTGATGCTGTTCTGTGACTGTTCGCGGCACCTCATCACAATCCT 1628
|||||||||||.||||||||||||||.||||||||||||||.|||||
Sbjct 1 ---------------------------ATGCTGATGCTCTTCTGTGACTGTTCCCGGCACCTCATCACCATCCT 47
Query 1629 TGATGACATTGAAGTTTATGAAGAACAGATTTCATTCAAACTGGAAGAGCTGGTCACTATCTCCTCTTTCCTGA 1702
.|||||||||||||||||||||||||||||.||.|||||.|||||||||||||||||.||||||||.|||||.|
Sbjct 48 CGATGACATTGAAGTTTATGAAGAACAGATCTCCTTCAAGCTGGAAGAGCTGGTCACCATCTCCTCGTTCCTCA 121
Query 1703 ATTCTTTTGTGTTTAAGATGATCTGGGATGGAATTGTAGAGAACGCCAAGGGTGAGACCTTGGAGCTGTTCCAG 1776
||||.||.||||||||||||||||||||.||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 122 ATTCCTTCGTGTTTAAGATGATCTGGGACGGAATTGTAGAGAATGCCAAGGGTGAGACCTTGGAGCTGTTCCAG 195
Query 1777 TCTGTCCACGGGTGGCTTATGGTGCTGTACGAGCGGGACTGCCGGCGGCGCTTCACCCCCGAGGACCACTGGCT 1850
||.|||||.||.|||||.|||||||||||.|||||.||||||||.||||||||..|.||.||||||||||||||
Sbjct 196 TCCGTCCATGGCTGGCTGATGGTGCTGTATGAGCGAGACTGCCGCCGGCGCTTTGCTCCGGAGGACCACTGGCT 269
Query 1851 GCGAAAGGATCTCAAACCTAGCGTGCTCTTCCAAGAACTCGACAGGGACAGAAAACGGGCACAGTTGATCCTGC 1924
.||.|.|||.|||||.|||.|.|||||||||||.||.|||||||.||||.|||...||||.|||.||.||||||
Sbjct 270 ACGGAGGGACCTCAAGCCTGGTGTGCTCTTCCAGGAGCTCGACAAGGACCGAAGGAGGGCTCAGCTGGTCCTGC 343
Query 1925 AGTACATCCCACATGTCATCCCTCACAAAAACAGAGTTCTACTGTTTCGAACCATGGTTACCAAGGAGAAGGAG 1998
||.|||||||.||.|||.|.||||||||.|||||||||||.|||||.||.|.||||||||.|||||||||.|||
Sbjct 344 AGCACATCCCCCACGTCGTGCCTCACAAGAACAGAGTTCTTCTGTTCCGGAACATGGTTATCAAGGAGAAAGAG 417
Query 1999 AAACTGGGGCTGGTGGAAACCAGCTCTGCCTCCCCGCATGTCACTCACATCACCATCCGCCGGTCCAGGATGCT 2072
||.||||||||.|||||.||||||||||||||.||.||.|||||.||||||||||||||..|||||.|||||.|
Sbjct 418 AAGCTGGGGCTTGTGGAGACCAGCTCTGCCTCTCCTCACGTCACCCACATCACCATCCGAAGGTCCCGGATGTT 491
Query 2073 GGAGGACGGCTACGAGCAGCTTAGGCAGCTCTCCCAGCACGCCATGAAGGGGGTCATCCGTGTGAAGTTTGTCA 2146
|||||||||||||||.|||||..|||||||.||||||||.|||||||||||.||.|||||.|||||||||||||
Sbjct 492 GGAGGACGGCTACGAACAGCTCCGGCAGCTTTCCCAGCATGCCATGAAGGGTGTGATCCGAGTGAAGTTTGTCA 565
Query 2147 ATGACCTCGGGGTGGACGAAGCAGGGATTGATCAAGACGGTGTTTTTAAGGAGTTCTTGGAAGAGATCATCAAG 2220
|.|||||||||||||||||.||.||||||||.||.||.|||||.||.||||||||..|||||||||||||||||
Sbjct 566 ACGACCTCGGGGTGGACGAGGCTGGGATTGACCAGGATGGTGTCTTCAAGGAGTTTCTGGAAGAGATCATCAAG 639
Query 2221 AGAGTTTTTGACCCAGCACTCAATCTGTTCAAGACAACCAGTGGGGATGAGAGGCTGTACCCCTCACCCACATC 2294
||.||.||||||||.||||||||.|||||||||||||||||.|||||||||.||||||||||.||||||||.||
Sbjct 640 AGGGTGTTTGACCCCGCACTCAACCTGTTCAAGACAACCAGCGGGGATGAGCGGCTGTACCCATCACCCACGTC 713
Query 2295 CTACATCCATGAGAATTACCTGCAGCTCTTCGAGTTTGTGGGGAAGATGCTGGGGAAGGCTGTGTATGAGGGAA 2368
||||||.||.||||||||||||||||||||||||||||||||||||||||||||.|||||.|||||||||||.|
Sbjct 714 CTACATTCACGAGAATTACCTGCAGCTCTTCGAGTTTGTGGGGAAGATGCTGGGAAAGGCAGTGTATGAGGGGA 787
Query 2369 TTGTGGTGGACGTGCCATTTGCATCCTTCTTCCTGAGCCAACTGCTTGGGCACCACCACAGCGTCTTCTATAGC 2442
|.|||||.||.|||||.|||||.|||||||||||||||||..||||.|||||||||||||||||||||||.|||
Sbjct 788 TCGTGGTAGATGTGCCCTTTGCCTCCTTCTTCCTGAGCCAGATGCTCGGGCACCACCACAGCGTCTTCTACAGC 861
Query 2443 TCGGTGGATGAACTGCCTTCTCTGGACTCCGAGTTCTATAAAAACCTCACCTCCATCAAGCGCTATGATGGGGA 2516
||.||||||||.||.||.||.||||||||.|||||.|||||||||||||||||||||||||||||.|||||.||
Sbjct 862 TCCGTGGATGAGCTTCCCTCCCTGGACTCGGAGTTTTATAAAAACCTCACCTCCATCAAGCGCTACGATGGAGA 935
Query 2517 CATCACTGACCTGGGCCTGACGCTGTCTTACGACGAGGACGTCATGGGTCAGCTTGTTTGCCATGAACTGATTC 2590
||||.|.|||||.||.|||||||||||||||||.||.|||||||||||||||||.||.|||||.||||||.|||
Sbjct 936 CATCGCAGACCTCGGGCTGACGCTGTCTTACGATGAAGACGTCATGGGTCAGCTCGTCTGCCACGAACTGGTTC 1009
Query 2591 CTGGAGGGAAGACCATTCCTGTTACAAATGAAAATAAAATTAGCTACATCCATCTGATGGCACATTTTCGAATG 2664
|.||||||||||||||.||.||||||.||||.||.||||||||||||||||||||||||||.|||||.||||||
Sbjct 1010 CCGGAGGGAAGACCATCCCGGTTACAGATGAGAACAAAATTAGCTACATCCATCTGATGGCGCATTTCCGAATG 1083
Query 2665 CACACTCAAATAAAAAACCAAACAGCTGCCCTCATTAGCGGATTCCGTTCCATTATCAAACCCGAGTGGATCCG 2738
|||||||||||.||||||||.||||||||.||.||.||.||.|||||||||||.|||||.||||||||||||||
Sbjct 1084 CACACTCAAATTAAAAACCAGACAGCTGCTCTTATCAGTGGCTTCCGTTCCATCATCAAGCCCGAGTGGATCCG 1157
Query 2739 AATGTTCTCAACTCCTGAACTGCAGCGTCTCATCTCTGGCGACAATGCTGAGATTGATCTGGAAGATTTAAAGA 2812
|||||||||.||.|||||.||.|||||.||||||||.||.|||||.||||||||.|||||||||||.|||||||
Sbjct 1158 AATGTTCTCTACCCCTGAGCTTCAGCGCCTCATCTCCGGGGACAACGCTGAGATAGATCTGGAAGACTTAAAGA 1231
Query 2813 AGCACACAGTCTACTACGGTGGTTTCCATGGAAGTCACAGAGTCATCATCTGGCTCTGGGATATTCTGGCCTCC 2886
||||||||||.|||||||||||.||.|||||.||.|||||.|||||||||||||||||||||||.|||||.|||
Sbjct 1232 AGCACACAGTGTACTACGGTGGCTTTCATGGGAGCCACAGGGTCATCATCTGGCTCTGGGATATCCTGGCTTCC 1305
Query 2887 GACTTCACACCGGATGAGAGAGCTATGTTTCTGAAGTTCGTGACCAGCTGCTCCAGACCCCCGCTCCTGGGATT 2960
||||||||.||.||.||.|||||.|||||.||||||||.|||||||||||||||.|.|||||||||||.|||||
Sbjct 1306 GACTTCACGCCTGAAGAAAGAGCCATGTTCCTGAAGTTTGTGACCAGCTGCTCCCGGCCCCCGCTCCTAGGATT 1379
Query 2961 CGCCTACCTCAAGCCTCCATTCTCCATCCGCTGCGTGGAGGTGTCGGACGATCAGGACACCGGGGACACTCTGG 3034
||||||||||||||||||.||||||||||||||.|||||.||.||.||.||.||||||||.|||||.||.||||
Sbjct 1380 CGCCTACCTCAAGCCTCCGTTCTCCATCCGCTGTGTGGAAGTATCAGATGACCAGGACACTGGGGATACCCTGG 1453
Query 3035 GCAGCGTCCTCCGGGGCTTCTTCACCATCCGCAAGCGGGAGCCAGGCGGCCGCCTGCCCACCTCCTCCACCTGC 3108
|||||||||||.|||||||||||||||||||||||.||||||||||.||.||.||||||||.||.|||||.|||
Sbjct 1454 GCAGCGTCCTCAGGGGCTTCTTCACCATCCGCAAGAGGGAGCCAGGGGGGCGTCTGCCCACATCTTCCACTTGC 1527
Query 3109 TTCAACCTGCTCAAGCTGCCCAACTACAGCAAGAAGAGCGTCCTCCGCGAGAAGCTGCGCTACGCCATCAGCAT 3182
|||||||||||.|||||||||||||||||||||||||||||.||.||.|||||.||.|||||.|||||||||||
Sbjct 1528 TTCAACCTGCTTAAGCTGCCCAACTACAGCAAGAAGAGCGTACTGCGAGAGAAACTACGCTATGCCATCAGCAT 1601
Query 3183 GAACACGGGCTTTGAACTCTCC 3204
|||||||||||||||.||||||
Sbjct 1602 GAACACGGGCTTTGAGCTCTCC 1623
