Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09284
- Subject:
- XM_017020196.1
- Aligned Length:
- 3212
- Identities:
- 696
- Gaps:
- 2488
Alignment
Query 1 ATGTTCACCCTGTCTCAGACCTCGAGAGCATGGTTCATCGATAGAGCCCGTCAGGCACGAGAAGAAAGGCTTGT 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTTCACCCTGTCTCAGACCTCGAGAGCATGGTTCATCGATAGAGCCCGTCAGGCACGAGAAGAAAGGCTTGT 74
Query 75 GCAGAAGGAACGGGAGCGGGCAGCTGTTGTGATCCAGGCCCATGTCCGGAGTTTTCTCTGTCGGAGTCGACTGC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCAGAAGGAACGGGAGCGGGCAGCTGTTGTGATCCAGGCCCATGTCCGGAGTTTTCTCTGTCGGAGTCGACTGC 148
Query 149 AGAGAGATATCAGGAGAGAGATTGATGACTTTTTTAAAGCAGATGACCCTGAGTCCACTAAAAGAAGTGCACTT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGAGAGATATCAGGAGAGAGATTGATGACTTTTTTAAAGCAGATGACCCTGAGTCCACTAAAAGAAGTGCACTT 222
Query 223 TGTATTTTCAAGATTGCCAGGAAACTGCTGTTCCTATTCAGAATCAAAGAGGATAATGAGAGATTTGAGAAGTT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TGTATTTTCAAGATTGCCAGGAAACTGCTGTTCCTATTCAGAATCAAAGAGGATAATGAGAGATTTGAGAAGTT 296
Query 297 GTGTCGCAGCATCCTGAGCAGCATGGATGCTGAGAATGAGCCTAAGGTGTGGTATGTGTCCCTGGCTTGTTCTA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTGTCGCAGCATCCTGAGCAGCATGGATGCTGAGAATGAGCCTAAGGTGTGGTATGTGTCCCTGGCTTGTTCTA 370
Query 371 AGGACCTCACCCTCCTTTGGATTCAACAGATCAAGAACATTTTGTGGTACTGCTGTGATTTTCTCAAGCAGCTC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGGACCTCACCCTCCTTTGGATTCAACAGATCAAGAACATTTTGTGGTACTGCTGTGATTTTCTCAAGCAGCTC 444
Query 445 AAGCCTGAAATCCTGCAGGACTCCCGACTCATCACCCTGTACCTCACGATGCTTGTCACCTTCACAGACACTTC 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAGCCTGAAATCCTGCAGGACTCCCGACTCATCACCCTGTACCTCACGATGCTTGTCACCTTCACAGACACTTC 518
Query 519 AACGTGGAAAATTCTTCGGGGAAAAGGTGAAAGTCTTCGACCAGCGATGAACCACATTTGTGCAAATATAATGG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AACGTGGAAAATTCTTCGGGGAAAAGGTGAAAGTCTTCGACCAGCGATGAACCACATTTGTGCAAATATAATGG 592
Query 593 GACATCTCAACCAGCATGGATTTTATTCTGTGCTGCAGATATTGTTAACCCGTGGCCTGGCAAGACCCCGTCCT 666
|||||||||||||||||||||||||||||||||||||| |..|||.| |||.||| ..||||
Sbjct 593 GACATCTCAACCAGCATGGATTTTATTCTGTGCTGCAG-TGCTGTGA-----TGGGCTG---------TTTCCT 651
Query 667 --TGTCTATCCAAAGGCACTTTAACAGCAGCTTTTTCTCTAGCGTTACGCCCTGTGATTGCTGCACAGTTCTCA 738
|.|...|.||.|.||.| .|.|||.|| .|||||||| |.||..|.|||..||
Sbjct 652 GATTTGGTTTCATATGCTC-CTCACAACA-------------------ACCCTGTGA--GGTGGTCCGTTGGCA 703
Query 739 GACAATCTGATTCGGCCGTTCCTCATCCACATCATGTCTG-----TGCCT-GCTCTGGTGACTCATCTCAGCAC 806
| ||.|||.| |||.||| ||.|| ||
Sbjct 704 G--AAGCTGGT----------------------ATGACTGGCAGTTGTCTCGC--------------------- 732
Query 807 AGTGACCCCTGAGCGCCTCACTGTTTTAGAATCCCATGACATGCTTCGTAAATTCATCATATTTTTAAGAGACC 880
Sbjct 733 -------------------------------------------------------------------------- 732
Query 881 AAGATCGATGCCGTGATGTATGTGAAAGTTTAGAAGGATGCCATACGCTTTGTCTAATGGGCAACCTCCTACAC 954
Sbjct 733 -------------------------------------------------------------------------- 732
Query 955 TTGGGCTCCCTCAGCCCCAGAGTGTTAGAGGAGGAGACAGATGGGTTCGTGAGTTTGCTCACCCAGACGCTGTG 1028
Sbjct 733 -------------------------------------------------------------------------- 732
Query 1029 CTACTGTCAGAAGTATGTGTCTCAGAAGAAGTCCAACCTGACCCACTGGCATCCTGTCCTTGGCTGGTTCTCCC 1102
Sbjct 733 -------------------------------------------------------------------------- 732
Query 1103 AATCTGTGGATTATGGCCTTAACGAGTCAATGCACTTGATCACCAAACAGCTGCAGTTCTTGTGGGGGGTGCCT 1176
Sbjct 733 -------------------------------------------------------------------------- 732
Query 1177 CTGATCCGGATCTTCTTCTGTGACATCCTGAGCAAGAAGCTACTGGAGAGCCAGGAGCCAGCCCACGCACAGCC 1250
Sbjct 733 -------------------------------------------------------------------------- 732
Query 1251 AGCATCCCCTCAGAATGTGCTCCCAGTGAAGAGTCTCCTAAAGCGTGCTTTTCAAAAGTCGGCATCAGTCCGGA 1324
Sbjct 733 -------------------------------------------------------------------------- 732
Query 1325 ATATTCTCAGGCCTGTCGGGGGTAAACGGGTCGACTCTGCAGAAGTCCAGAAGGTTTGCAACATCTGTGTCCTC 1398
Sbjct 733 -------------------------------------------------------------------------- 732
Query 1399 TACCAGACCTCGCTGACAACTCTCACACAGATTCGGCTGCAGATACTCACAGGTCTCACTTACCTTGATGACCT 1472
Sbjct 733 -------------------------------------------------------------------------- 732
Query 1473 GCTTCCCAAACTGTGGGCATTTATCTGTGAGCTCGGGCCCCACGGAGGGTTAAAGCTCTTCTTGGAATGCCTGA 1546
Sbjct 733 -------------------------------------------------------------------------- 732
Query 1547 ACAATGACACTGAAGAGTCCAAGCAACTCTTGGCCATGCTGATGCTGTTCTGTGACTGTTCGCGGCACCTCATC 1620
Sbjct 733 -------------------------------------------------------------------------- 732
Query 1621 ACAATCCTTGATGACATTGAAGTTTATGAAGAACAGATTTCATTCAAACTGGAAGAGCTGGTCACTATCTCCTC 1694
Sbjct 733 -------------------------------------------------------------------------- 732
Query 1695 TTTCCTGAATTCTTTTGTGTTTAAGATGATCTGGGATGGAATTGTAGAGAACGCCAAGGGTGAGACCTTGGAGC 1768
Sbjct 733 -------------------------------------------------------------------------- 732
Query 1769 TGTTCCAGTCTGTCCACGGGTGGCTTATGGTGCTGTACGAGCGGGACTGCCGGCGGCGCTTCACCCCCGAGGAC 1842
Sbjct 733 -------------------------------------------------------------------------- 732
Query 1843 CACTGGCTGCGAAAGGATCTCAAACCTAGCGTGCTCTTCCAAGAACTCGACAGGGACAGAAAACGGGCACAGTT 1916
Sbjct 733 -------------------------------------------------------------------------- 732
Query 1917 GATCCTGCAGTACATCCCACATGTCATCCCTCACAAAAACAGAGTTCTACTGTTTCGAACCATGGTTACCAAGG 1990
Sbjct 733 -------------------------------------------------------------------------- 732
Query 1991 AGAAGGAGAAACTGGGGCTGGTGGAAACCAGCTCTGCCTCCCCGCATGTCACTCACATCACCATCCGCCGGTCC 2064
Sbjct 733 -------------------------------------------------------------------------- 732
Query 2065 AGGATGCTGGAGGACGGCTACGAGCAGCTTAGGCAGCTCTCCCAGCACGCCATGAAGGGGGTCATCCGTGTGAA 2138
Sbjct 733 -------------------------------------------------------------------------- 732
Query 2139 GTTTGTCAATGACCTCGGGGTGGACGAAGCAGGGATTGATCAAGACGGTGTTTTTAAGGAGTTCTTGGAAGAGA 2212
Sbjct 733 -------------------------------------------------------------------------- 732
Query 2213 TCATCAAGAGAGTTTTTGACCCAGCACTCAATCTGTTCAAGACAACCAGTGGGGATGAGAGGCTGTACCCCTCA 2286
Sbjct 733 -------------------------------------------------------------------------- 732
Query 2287 CCCACATCCTACATCCATGAGAATTACCTGCAGCTCTTCGAGTTTGTGGGGAAGATGCTGGGGAAGGCTGTGTA 2360
Sbjct 733 -------------------------------------------------------------------------- 732
Query 2361 TGAGGGAATTGTGGTGGACGTGCCATTTGCATCCTTCTTCCTGAGCCAACTGCTTGGGCACCACCACAGCGTCT 2434
Sbjct 733 -------------------------------------------------------------------------- 732
Query 2435 TCTATAGCTCGGTGGATGAACTGCCTTCTCTGGACTCCGAGTTCTATAAAAACCTCACCTCCATCAAGCGCTAT 2508
Sbjct 733 -------------------------------------------------------------------------- 732
Query 2509 GATGGGGACATCACTGACCTGGGCCTGACGCTGTCTTACGACGAGGACGTCATGGGTCAGCTTGTTTGCCATGA 2582
Sbjct 733 -------------------------------------------------------------------------- 732
Query 2583 ACTGATTCCTGGAGGGAAGACCATTCCTGTTACAAATGAAAATAAAATTAGCTACATCCATCTGATGGCACATT 2656
Sbjct 733 -------------------------------------------------------------------------- 732
Query 2657 TTCGAATGCACACTCAAATAAAAAACCAAACAGCTGCCCTCATTAGCGGATTCCGTTCCATTATCAAACCCGAG 2730
Sbjct 733 -------------------------------------------------------------------------- 732
Query 2731 TGGATCCGAATGTTCTCAACTCCTGAACTGCAGCGTCTCATCTCTGGCGACAATGCTGAGATTGATCTGGAAGA 2804
Sbjct 733 -------------------------------------------------------------------------- 732
Query 2805 TTTAAAGAAGCACACAGTCTACTACGGTGGTTTCCATGGAAGTCACAGAGTCATCATCTGGCTCTGGGATATTC 2878
Sbjct 733 -------------------------------------------------------------------------- 732
Query 2879 TGGCCTCCGACTTCACACCGGATGAGAGAGCTATGTTTCTGAAGTTCGTGACCAGCTGCTCCAGACCCCCGCTC 2952
Sbjct 733 -------------------------------------------------------------------------- 732
Query 2953 CTGGGATTCGCCTACCTCAAGCCTCCATTCTCCATCCGCTGCGTGGAGGTGTCGGACGATCAGGACACCGGGGA 3026
Sbjct 733 -------------------------------------------------------------------------- 732
Query 3027 CACTCTGGGCAGCGTCCTCCGGGGCTTCTTCACCATCCGCAAGCGGGAGCCAGGCGGCCGCCTGCCCACCTCCT 3100
Sbjct 733 -------------------------------------------------------------------------- 732
Query 3101 CCACCTGCTTCAACCTGCTCAAGCTGCCCAACTACAGCAAGAAGAGCGTCCTCCGCGAGAAGCTGCGCTACGCC 3174
Sbjct 733 -------------------------------------------------------------------------- 732
Query 3175 ATCAGCATGAACACGGGCTTTGAACTCTCC 3204
Sbjct 733 ------------------------------ 732
