Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09322
- Subject:
- NM_001353679.2
- Aligned Length:
- 1723
- Identities:
- 489
- Gaps:
- 1226
Alignment
Query 1 ATGGCGACGGAGGGAGGAGGGAAGGAGATGAACGAGATTAAGACCCAATTCACCACCCGGGAAGGTCTGTACAA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGACGGAGGGAGGAGGGAAGGAGATGAACGAGATTAAGACCCAATTCACCACCCGGGAAGGTCTGTACAA 74
Query 75 GCTGCTGCCGCACTCGGAGTACAGCCGGCCCAACCGGGTGCCCTTCAACTCGCAGGGATCCAACCCTGTCCGCG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCTGCTGCCGCACTCGGAGTACAGCCGGCCCAACCGGGTGCCCTTCAACTCGCAGGGATCCAACCCTGTCCGCG 148
Query 149 TCTCCTTCGTAAACCTCAACGACCAGTCTGGCAACGGCGACCGCCTCTGCTTCAATGTGGGCCGGGAGCTGTAC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCTCCTTCGTAAACCTCAACGACCAGTCTGGCAACGGCGACCGCCTCTGCTTCAATGTGGGCCGGGAGCTGTAC 222
Query 223 TTCTATATCTACAAGGGGGTCCGCAAGGCTGCTGACTTGAGTAAACCAATAGATAAAAGGATATACAAAGGAAC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TTCTATATCTACAAGGGGGTCCGCAAGGCTGCTGACTTGAGTAAACCAATAGATAAAAGGATATACAAAGGAAC 296
Query 297 ACAGCCTACTTGTCATGACTTCAACCACCTAACAGCCACAGCAGAAAGTGTCTCTCTCCTAGTGGGCTTTTCCG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ACAGCCTACTTGTCATGACTTCAACCACCTAACAGCCACAGCAGAAAGTGTCTCTCTCCTAGTGGGCTTTTCCG 370
Query 371 CAGGCCAAGTCCAGCTTATAGACCCAATCAAAAAAGAAACTAGCAAACTTTTTAATGAGGAAAGACTAATAGAC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CAGGCCAAGTCCAGCTTATAGACCCAATCAAAAAAGAAACTAGCAAACTTTTTAATGAGGAA------------ 432
Query 445 AAGTCACGAGTTACCTGTGTCAAATGGGTTCACGGTTCGGAAAGCCTTTTCCTAGTAGCCCACTCGAGTGGGAA 518
|||| |||| || ||||
Sbjct 433 -------------------------GGGT-----------------------------CCCA---GA---GGAA 446
Query 519 CATGTACT--TATATAATGTGGAGCACACTTGTGGCA----CCACAGCCCCCCACTACC---AGCTT-CTGAAG 582
|.|.||| ||||.|.|.| ||||| |.|||| ||||| |.|| .|||| ||| ||
Sbjct 447 -AAGCACTCCTATAGACTCT-GAGCA-----GGGGCAGCTGCCACA---------TTCCGTTTGCTTCCTG-AG 503
Query 583 C------AGGGAGAGAGCTTTGCCGTGCACACTTGCAAGAGCAAATCCACGAGGAACCCTCTCCTTAAGTGGAC 650
| |||
Sbjct 504 CTTGTCTAGG---------------------------------------------------------------- 513
Query 651 GGTGGGCGAGGGGGCCCTCAACGAGTTTGCTTTCTCCCCAGATGGCAAGTTCTTAGCGTGCGTGAGCCAGGACG 724
Sbjct 514 -------------------------------------------------------------------------- 513
Query 725 GGTTTCTGCGGGTGTTCAACTTTGACTCAGTGGAGCTGCACGGTACGATGAAAAGCTACTTTGGGGGCTTGCTG 798
Sbjct 514 -------------------------------------------------------------------------- 513
Query 799 TGTGTGTGCTGGAGCCCGGATGGCAAGTACATCGTGACAGGTGGGGAGGACGACTTGGTGACAGTCTGGTCCTT 872
Sbjct 514 -------------------------------------------------------------------------- 513
Query 873 TGTAGACTGCCGAGTAATAGCCAGAGGCCACGGGCACAAGTCCTGGGTCAGTGTTGTAGCGTTTGACCCTTATA 946
Sbjct 514 -------------------------------------------------------------------------- 513
Query 947 CCACTAGTGTAGAAGAAGGTGACCCTATGGAGTTTAGTGGCAGCGATGAGGACTTCCAAGACCTTCTTCATTTT 1020
Sbjct 514 -------------------------------------------------------------------------- 513
Query 1021 GGCAGAGATCGAGCAAATAGTACACAGTCCAGGCTCTCCAAACGGAACTCTACAGACAGCCGCCCCGTAAGTGT 1094
Sbjct 514 -------------------------------------------------------------------------- 513
Query 1095 CACGTATCGGTTTGGTTCCGTGGGCCAGGACACACAGCTCTGTTTATGGGACCTTACAGAAGATATCCTTTTCC 1168
Sbjct 514 -------------------------------------------------------------------------- 513
Query 1169 CTCACCAACCCCTCTCAAGAGCAAGGACACACACAAATGTCATGAATGCCACGAGTCCTCCTGCTGGAAGCAAT 1242
Sbjct 514 -------------------------------------------------------------------------- 513
Query 1243 GGGAACAGTGTTACAACACCCGGGAACTCTGTGCCGCCTCCTCTGCCACGGTCCAACAGCCTTCCACATTCAGC 1316
Sbjct 514 -------------------------------------------------------------------------- 513
Query 1317 AGTCTCAAATGCTGGCAGCAAAAGCAGTGTCATGGACGGGGCCATTGCTTCTGGGGTCAGCAAATTTGCAACAC 1390
Sbjct 514 -------------------------------------------------------------------------- 513
Query 1391 TTTCACTACATGACCGGAAGGAGAGGCACCACGAGAAAGATCACAAGCGAAATCATAGCATGGGACACATTTCT 1464
Sbjct 514 -------------------------------------------------------------------------- 513
Query 1465 AGCAAGAGCAGTGACAAACTGAATCTAGTTACCAAAACCAAAACGGACCCTGCTAAAACTCTGGGAACGCCCCT 1538
Sbjct 514 -------------------------------------------------------------------------- 513
Query 1539 GTGTCCTCGAATGGAAGATGTTCCCTTGTTAGAGCCGCTGATATGTAAAAAGATAGCACATGAGAGACTGACTG 1612
Sbjct 514 -------------------------------------------------------------------------- 513
Query 1613 TACTAATATTTCTTGAAGACTGTATAGTCACTGCTTGTCAGGAGGGATTTATTTGCACATGGGGAAGGCCTGGT 1686
Sbjct 514 -------------------------------------------------------------------------- 513
Query 1687 AAAGTGGTAAGTTTTAATCCT 1707
Sbjct 514 --------------------- 513
